NO01G03920, NO01G03920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03920 vs. NCBI_GenBank
Match: EWM29325.1 (fkbp-type peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 398.7 bits (1023), Expect = 1.300e-107 Identity = 202/233 (86.70%), Postives = 211/233 (90.56%), Query Frame = 0 Query: 1 MGISFSSPSPF--QPPSAFAATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLTFDSQYLQDGMAKSLQELRDKGVKVPSTKTFMTKPEILGSRRQEIELN-LPE 231 MG FS F +P A AA N VQD DLP VAF+TKSGLRYYDVRKGEG SPKWGQVAIIQYEGY+RASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEG+H+M+LGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVREL KAE NDP GEI+YDVELVSLYDDEADLGYYDDLTFD YLQ+GMAKSLQELRDKGVKVPSTK+FMTKPEILGSRRQEIELN LPE Sbjct: 128 MGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGSRRQEIELNGLPE 360
BLAST of NO01G03920 vs. NCBI_GenBank
Match: CBJ28081.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Ectocarpus siliculosus]) HSP 1 Score: 157.9 bits (398), Expect = 3.800e-35 Identity = 75/170 (44.12%), Postives = 109/170 (64.12%), Query Frame = 0 Query: 19 ATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLTFDSQYLQD 189 A ++ ++P V TK+G++Y+D R GEG SP+WGQ II++ Y R++P KL+ + K YL KHGNG I+G++EG+H+MR+GG RR+++P +GY+ GLGP P + +R ILV L E GE+V D+EL+ +DDEAD GYY+D + LQD Sbjct: 106 AAGMQEEEEVPTVGKITKAGIKYFDFRVGEGPSPRWGQDCIIRFTMYGRSTPDEKLIKIQSSDNNKEKYLFKHGNGFQIKGMEEGMHSMRVGGKRRVIMPQSMGYSVQGLGPYPADPRKRDILVEVLTSFE-KTTTGELVMDIELLDAFDDEADQGYYEDTAVTPEQLQD 274
BLAST of NO01G03920 vs. NCBI_GenBank
Match: EJK63695.1 (hypothetical protein THAOC_15633 [Thalassiosira oceanica]) HSP 1 Score: 146.7 bits (369), Expect = 8.700e-32 Identity = 77/171 (45.03%), Postives = 104/171 (60.82%), Query Frame = 0 Query: 8 PSPFQPPSAFAATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDD 179 P +PP++ A+ + V+ FKT SGL+Y ++R+G G SPK+G I Y Y++ S+ D + YL+KHGNGR I GLDEGLHTM++GG RRI++P +LGY GLGPLP + R L R LEK G +V DVE+ S+ +DEAD GYY+D Sbjct: 88 PQSTKPPTSTASEDGVR-------VFKTNSGLQYIELREGSGESPKYGNFVTIAYRAYVKLPDTSEKKFDLDEFDSDKAYLIKHGNGRTIPGLDEGLHTMKVGGKRRIIIPPKLGYVTNGLGPLPVGPYGRFKLYRLLEKM-VEYRGGNVVVDVEMKSIMEDEADQGYYED 250
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_002288036.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95479.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 141.7 bits (356), Expect = 2.800e-30 Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 0 Query: 33 FKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDD 179 FKTKSGL+Y D+ +G GASPK+G I Y+ +I+ D + +LVKHGNGR + GLDEGLHTM++GG RRI+VP +LGY +GLGP+P + R L R L++ G +V+DVE+ S+ +DEAD GYYDD Sbjct: 131 FKTKSGLQYIDLVEGTGASPKYGNFITISYKAFIKLPDIQGKKSEFDEFDSDKGFLVKHGNGRNVPGLDEGLHTMKVGGKRRIIVPPKLGYVSSGLGPIPVGPYGRWKLNRLLDRM-VEAKGGNVVFDVEMKSILEDEADQGYYDD 275
BLAST of NO01G03920 vs. NCBI_GenBank
Match: OSX75750.1 (hypothetical protein BU14_0223s0022 [Porphyra umbilicalis]) HSP 1 Score: 140.2 bits (352), Expect = 8.100e-30 Identity = 78/177 (44.07%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 13 PPSAFAA-------TNSVQDSDLPP-VAFKTKSGLRYYDVRKGEG-ASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLT 181 PP A AA TN+ +D PP F T SGLRY+D G G P WG + + Y Y + +L + D TYARK LV HGNG+ I G++E LH MR GG RR+V+P LGYT +GLGP+PP +R+ L + L N+ G +V+D+ELV++ D D G Y DLT Sbjct: 97 PPRASAAPAVGPTVTNAAKDGSTPPETGFVTNSGLRYFDFAVGSGDRRPVWGDLLTVSYVLYTVSPEGDRLDIADSTYARKQHMLVHHGNGQTILGVEEALHGMRAGGRRRVVIPPSLGYTSSGLGPVPPRTTKRRALNKAL-----NEGNGLVVFDLELVAVLPDTNDTGLYTDLT 268
BLAST of NO01G03920 vs. NCBI_GenBank
Match: KOO23127.1 (amine oxidase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 129.0 bits (323), Expect = 1.900e-26 Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 0 Query: 34 KTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDL 180 +T+SGL Y D ++G G++P++GQ+ Y GY + LV FD +Y R++ YLVKHGNG +G++E LHTMR+GG RR+V+P LGYT GP+PP A R L + E +++D+ELVS+ DD D G YDDL Sbjct: 52 RTRSGLLYMDFKEGSGSTPRFGQLLRFHYVGYAPNTQKRTLVSFDSSYDRRSAYLVKHGNGFTCQGIEEALHTMRVGGRRRVVLPPALGYT-ADKGPMPPGAGARSKLFDAVTAGE------PLIFDLELVSIMDDLLDRGDYDDL 190
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_001712520.1 (fkbp-like protein [Hemiselmis andersenii] >ABW98195.1 fkbp-like protein [Hemiselmis andersenii]) HSP 1 Score: 122.9 bits (307), Expect = 1.300e-24 Identity = 68/166 (40.96%), Postives = 95/166 (57.23%), Query Frame = 0 Query: 1 MGISFSSPSPFQPPSAFAATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSL 167 +GI FS F+ + A N ++S +AF TKSGL+ D GE P+WG II Y Y +S K+ DTY + TP+L HG G+ I+GL+E +H+M+ GG RR+V+P ELGY GLGP+PP +RK L L + E + I+ D+ELV + Sbjct: 60 IGIDFS----FENKNFAMAENLEKNS----LAFSTKSGLKIIDFLPGEAQMPQWGDFVIINYVLYKNSS--QKIEKISDTYQKNTPFLFIHGGGQTIKGLEEAVHSMKKGGKRRVVIPQELGYNVPGLGPIPPENSKRKKL---LSQEELENKSSNIILDIELVDI 212
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_005708790.1 (immunophilin isoform 1 [Galdieria sulphuraria] >EME32270.1 immunophilin isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 116.3 bits (290), Expect = 1.300e-22 Identity = 61/169 (36.09%), Postives = 89/169 (52.66%), Query Frame = 0 Query: 14 PSAFAATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLTFD 183 P+ A + S+ FKT G Y D R G G SP WG + +I Y Y +L F TY K P+ +HGNG+ I+GL+EG+ +M++GG RR+V+P L Y+ GLGP+PP+ R+ L L++ + DVEL+ ++ D + YY D D Sbjct: 81 PNNLLAQKVSESSEKSLTVFKTSGGTEYVDFRVGSGDSPAWGDMVVIHYVIYTVEG--GQLRKFYSTYDDKQPFAFRHGNGQTIKGLEEGIDSMKVGGRRRMVIPGSLAYSVAGLGPIPPSTSVRRKLADSLKQGNV------LSLDVELLKIWKDPVGMEYYSDFVPD 241
BLAST of NO01G03920 vs. NCBI_GenBank
Match: XP_005708791.1 (immunophilin isoform 2 [Galdieria sulphuraria] >EME32271.1 immunophilin isoform 2 [Galdieria sulphuraria]) HSP 1 Score: 113.6 bits (283), Expect = 8.200e-22 Identity = 62/178 (34.83%), Postives = 93/178 (52.25%), Query Frame = 0 Query: 14 PSAFAATNSVQDSDLPPVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETN--------DPMGEIV-YDVELVSLYDDEADLGYYDDLTFD 183 P+ A + S+ FKT G Y D R G G SP WG + +I Y Y +L F TY K P+ +HGNG+ I+GL+EG+ +M++GG RR+V+P L Y+ GLGP+PP+ R+ L L++ + +G ++ DVEL+ ++ D + YY D D Sbjct: 81 PNNLLAQKVSESSEKSLTVFKTSGGTEYVDFRVGSGDSPAWGDMVVIHYVIYTVEG--GQLRKFYSTYDDKQPFAFRHGNGQTIKGLEEGIDSMKVGGRRRMVIPGSLAYSVAGLGPIPPSTSVRRKLADSLKQGKRAIQCDTFYLKQIGNVLSLDVELLKIWKDPVGMEYYSDFVPD 256
BLAST of NO01G03920 vs. NCBI_GenBank
Match: AFP65359.1 (fkbp-like protein (nucleomorph) [Chroomonas mesostigmatica CCMP1168]) HSP 1 Score: 112.8 bits (281), Expect = 1.400e-21 Identity = 63/174 (36.21%), Postives = 100/174 (57.47%), Query Frame = 0 Query: 16 AFAATNSVQDSDLP-PVAFKTKSGLRYYDVRKGEGASPKWGQVAIIQYEGYIRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGLHTMRLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELEKAETNDPMGEIVYDVELVSLYDDEADLGYYDDLTFDSQYLQD 189 +F + + D DL AF TKSGL+ + +GEG +P+WG + +I Y Y +P L D T+ R P+L HG G+VIRG++E +H M++GG RR+++ E GY LGP+PP ++RK L E K E + IV+D+ELV + + LG + + ++ +++ Sbjct: 64 SFPGFSVIADDDLKNKKAFSTKSGLKILEFTEGEGKAPEWGNLLVINYVIY-ELTP-KGLDQIDSTFGRNQPFLFAHGGGQVIRGIEETVHDMKMGGKRRVILSEETGYVNPTLGPVPPLNYQRKKLF-EKNKNEFLENKKLIVFDIELVDIKKNIHTLGNFSNFFLNNTEIRN 234 The following BLAST results are available for this feature:
BLAST of NO01G03920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03920 ID=NO01G03920|Name=NO01G03920|organism=Nannochloropsis oceanica|type=gene|length=699bpback to top protein sequence of NO01G03920.1 >NO01G03920.1-protein ID=NO01G03920.1-protein|Name=NO01G03920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
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