NO01G03910, NO01G03910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03910 vs. NCBI_GenBank
Match: EWM29331.1 (Winged helix-turn-helix transcription repressor [Nannochloropsis gaditana]) HSP 1 Score: 236.9 bits (603), Expect = 2.000e-58 Identity = 155/210 (73.81%), Postives = 162/210 (77.14%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGASNEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEKMEQDGMDPKKRKVSVDR 291 PLFLRKTYQMLESC +IAAWS KGDSFLIKDPD FAQTVIPQYFSH+NFSSFVRQLNFYGFRKVKQDVRVLQ XXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRG+PQLL+QIRRATHGASNEQEVSHLK+EVGQL SDIDRLTSLV GLM+ KM +G DPKKRKVS DR Sbjct: 81 PLFLRKTYQMLESCSPSIAAWSGKGDSFLIKDPDSFAQTVIPQYFSHNNFSSFVRQLNFYGFRKVKQDVRVLQG-----------------------------XXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGKPQLLAQIRRATHGASNEQEVSHLKTEVGQLXXXXXXXSSDIDRLTSLVQGLMVAKMGSEGADPKKRKVSADR 261
BLAST of NO01G03910 vs. NCBI_GenBank
Match: CBJ25507.1 (Heat Shock transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 137.1 bits (344), Expect = 2.200e-28 Identity = 80/195 (41.03%), Postives = 107/195 (54.87%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATH-GASNE-QEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEK 274 P+FLRKTY+M+ +C AAW+ GD+F+IKDPD FA VIP++F H+ FSSFVRQLNFYGFRKVK ++ V S EF+HD F+R +P LLS+IRRATH G + E QEV L+SEVG L+ ++ +M ID L+ +V+ L+ E+ Sbjct: 23 PIFLRKTYEMINTCEDVHAAWTAAGDTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVEGQDS------------------------------------------------KWWEFKHDLFLRDKPNLLSEIRRATHYGVTPEKQEVDDLRSEVGSLRLQVVDMDGRIDALSRMVDRLLEER 169
BLAST of NO01G03910 vs. NCBI_GenBank
Match: CCA14373.1 (HSFtype DNAbinding putative [Albugo laibachii Nc14]) HSP 1 Score: 125.9 bits (315), Expect = 5.100e-25 Identity = 75/193 (38.86%), Postives = 100/193 (51.81%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGASN---EQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLM 271 PLFL KTY M+ES PK +A WS G SF+IK+P FA ++PQYF H+ FSSFVRQLNFYGFRK K+D IAL EF H+KFIRG+ +L+S IRR T+ S+ + EV LKS V +L+G++ ++ + LT++V L+ Sbjct: 31 PLFLHKTYDMIESAPKHLACWSASGQSFIIKNPREFAVIMLPQYFKHNKFSSFVRQLNFYGFRKYKKD-----EVMIALE---------------------------------------EDEAKHWWEFYHEKFIRGKKELMSDIRRKTYSDSSTPEKHEVEALKSNVNRLQGQVAQLMEQLTGLTNMVKTLI 179
BLAST of NO01G03910 vs. NCBI_GenBank
Match: CCI41103.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 125.2 bits (313), Expect = 8.700e-25 Identity = 78/220 (35.45%), Postives = 111/220 (50.45%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGAS---NEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEKMEQDGMDPKKRKVSVDRAAASAAR 298 PLFL+KTY M+ES PK +A+WS G SF+IK+P FA+ ++PQYF H+ FSSFVRQLNFYGFRK K+D ++ EF H+KFIRG+ QL+S+IRR T+ + + EV LKS V +L+G++ ++ + LT++V L+ +P + K D A S A+ Sbjct: 28 PLFLQKTYDMIESAPKHLASWSASGQSFIIKNPRDFAREMLPQYFKHNKFSSFVRQLNFYGFRKHKKDEVMI--------------------------------------------AVEEDEAKHWWEFYHEKFIRGKKQLMSEIRRKTYSDATPPEKHEVETLKSNVDRLQGQVAQLMEQLTGLTNMVKTLI------SAREPARNKSVSDLQAQSIAQ 197
BLAST of NO01G03910 vs. NCBI_GenBank
Match: XP_002179387.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49210.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 124.8 bits (312), Expect = 1.100e-24 Identity = 73/211 (34.60%), Postives = 114/211 (54.03%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGAS-NEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLM-LEKMEQDGMDPKKRKVSVD 290 P+FL+KTY M+++C +++AWS G +F++KD +RFA VIP++F H+NFSSFVRQLNFYGFRK+K D L++ +FRH+ F RGRP LL +IR++ S ++QEV LK EV L+ ++ M D+++LT++V+ L+ +++ + KK+K+ D Sbjct: 40 PMFLKKTYTMIDTCDSSVSAWSHDGLTFVVKDTERFATDVIPEFFKHNNFSSFVRQLNFYGFRKIKSDPLRLKD-------------------------------------------VESSEESRYWKFRHEFFQRGRPDLLVEIRKSNQQESVDKQEVDSLKCEVSTLRSRLSNMSRDMEKLTNVVSSLVKTQQLNEMESACKKQKLLHD 207
BLAST of NO01G03910 vs. NCBI_GenBank
Match: CBN75374.1 (Heat Shock transcription factor [Ectocarpus siliculosus]) HSP 1 Score: 124.0 bits (310), Expect = 1.900e-24 Identity = 79/206 (38.35%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKA----IAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATH--GASNEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEKMEQDGMD 281 P+FLRKT++M+ +C K+ +A WS G++F++K PD F+ VIP++F HS FSSFVRQLNFYGFRKVK N S A EF+HD F R + LL+ +RRATH A+++QEV HL+SEV +L+ I M I +LTSLV L +E G D Sbjct: 24 PIFLRKTFEMVSACSKSDGENLACWSPTGETFIVKHPDAFSSVVIPKFFKHSKFSSFVRQLNFYGFRKVK------SNASGA------------------------------------------GVNSKWWEFKHDLFHRDKSHLLADMRRATHYGVAADKQEVEHLRSEVTRLRSHIDAMGDKIGQLTSLVESLSVEGHTGSGGD 181
BLAST of NO01G03910 vs. NCBI_GenBank
Match: OQS00155.1 (HSF-type DNA-binding [Thraustotheca clavata]) HSP 1 Score: 120.6 bits (301), Expect = 2.100e-23 Identity = 69/193 (35.75%), Postives = 109/193 (56.48%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGASN---EQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLM 271 P+FL+KTY M E+ P ++AAW+ G + +IKDP+ FA++V+P+YF H+NF+S+VRQLNFYGFRK K+D V+ XXXX EF H++F+R +P+L++QIRR T+ S+ +++V LKS+V + +++++ I LT++V+ LM Sbjct: 13 PIFLQKTYTMFENSPDSVAAWANNGTTIVIKDPEEFARSVLPKYFKHNNFASYVRQLNFYGFRKYKKDDIVI---------------------------------------------XXXXKTKHWWEFYHEQFLRAKPELMAQIRRKTYSESDSTEKEDVEVLKSQVVSFQNQLEQLTGQITNLTAVVSALM 160
BLAST of NO01G03910 vs. NCBI_GenBank
Match: XP_002186120.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65590.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 120.2 bits (300), Expect = 2.800e-23 Identity = 70/208 (33.65%), Postives = 104/208 (50.00%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRKVKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGAS-NEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEKMEQDGMDPKKRKVS 288 P+FLRKT+ M++SC +AAWS G +F++KD ++FA VIP++F H+NFSSFVRQLNFYGFRK+K D +++ +FRH+KF RGRP LL +IR++ H S +++EV HL +LT +V G +++ + +D KKRK++ Sbjct: 67 PIFLRKTFTMIDSCDPYVAAWSDDGYTFVVKDTEKFASEVIPEFFKHNNFSSFVRQLNFYGFRKIKSDPLRIKDAE-------------------------------------------TNEESRFWKFRHEKFQRGRPDLLGEIRKSNHNESADKREVEHLXXXXXXXXXXXXXXXXXXXQLTGVV-GTLMKNCQLHDIDSKKRKIT 230
BLAST of NO01G03910 vs. NCBI_GenBank
Match: CCI41162.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 118.6 bits (296), Expect = 8.100e-23 Identity = 69/207 (33.33%), Postives = 102/207 (49.28%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRK-VKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHG---ASNEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEKMEQDGMDPKK 284 P+FL+KTY M+ESCP IA WS SF+IKDP A ++P+YF H+NFSSFVRQLNFYGFRK K+++ +++ +F H+ F+RGRP+ L +I+R T+ A + EV LK+ V +++ ++ + I LTSLV L+ E+ + P + Sbjct: 26 PIFLQKTYNMIESCPNEIACWSTSDRSFIIKDPRELAARILPRYFKHNNFSSFVRQLNFYGFRKRKKEEIEIVKTDE----------------------------------------------PKNWWQFYHEYFVRGRPEWLCRIKRKTYSESVAPEKHEVETLKNTVDRMQKQVVNLMGQITDLTSLVKVLIEERNRSPALAPSQ 186
BLAST of NO01G03910 vs. NCBI_GenBank
Match: CCA19789.1 (HSFtype DNAbinding putative [Albugo laibachii Nc14] >CCA24399.1 HSFtype DNAbinding putative [Albugo laibachii Nc14]) HSP 1 Score: 118.2 bits (295), Expect = 1.100e-22 Identity = 69/197 (35.03%), Postives = 98/197 (49.75%), Query Frame = 0 Query: 81 PLFLRKTYQMLESCPKAIAAWSVKGDSFLIKDPDRFAQTVIPQYFSHSNFSSFVRQLNFYGFRK-VKQDVRVLQNGSIALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFRHDKFIRGRPQLLSQIRRATHGAS---NEQEVSHLKSEVGQLKGKIQEMCSDIDRLTSLVNGLMLEK 274 P+FL+KTY M+ESCP IA WS SF+IK+P A ++P+YF H+NFSSFVRQLNFYGFRK K+++ +++ + +F H+ F+RGRP LL +I+R T+ S EV LK V +++ ++ + I LTSLV L+ EK Sbjct: 26 PIFLQKTYNMIESCPSEIACWSATDRSFIIKNPRELAAHILPRYFKHNNFSSFVRQLNFYGFRKRKKEEIEIIKQDEL----------------------------------------------KNWWQFYHEYFVRGRPDLLCRIKRKTYSESTVPENHEVETLKKTVDRMQSQVVNLMGQISDLTSLVKVLIDEK 176 The following BLAST results are available for this feature:
BLAST of NO01G03910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03910 ID=NO01G03910|Name=NO01G03910|organism=Nannochloropsis oceanica|type=gene|length=3092bpback to top protein sequence of NO01G03910.1 >NO01G03910.1-protein ID=NO01G03910.1-protein|Name=NO01G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=746bpback to top Synonyms
Publications
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