NO01G03900, NO01G03900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_019640623.1 (PREDICTED: kelch-like protein 24 [Branchiostoma belcheri]) HSP 1 Score: 107.8 bits (268), Expect = 1.000e-19 Identity = 77/255 (30.20%), Postives = 120/255 (47.06%), Query Frame = 0 Query: 158 VRQQFLRHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVA---NLPHCWAAAK-PHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQ 407 + Q L Y DV +G FP HR +AA AMF S M++SN ++ ++ A ++ ++Y G V +T N + +LE + F L + CC FLA + + LAD C T LY A +L H + ++P+ +ELLS D + T E VF+VA+ W+ R +D + K V+ VR P + + L++ VE P+++ ++ CQ FV+EA RYQ Sbjct: 43 LNDQRLHGRYTDVVVCADGVEFPCHRAVLAASVPYFSAMFGSDMKDSNAEKVEIKQVKASVMGELVQYVYTGRVRITSQNAQALLEAACMFQCASLRDGCCRFLAKNLDPCNCLGVQHLADALSC------TELYTKAREFSLQHFLEVVQHQEILQVPEESFMELLSSDDINTDSEEAVFDVAMAWV---RYDVETRKDSLAK---------VMSVVRLPLVRSEFLLDTVETDPLIRDSKECQEFVVEARRYQ 279
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_010873620.1 (PREDICTED: kelch-like protein 21 [Esox lucius] >XP_019907347.1 PREDICTED: kelch-like protein 21 [Esox lucius]) HSP 1 Score: 107.5 bits (267), Expect = 1.400e-19 Identity = 76/243 (31.28%), Postives = 113/243 (46.50%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y CH L+ +V+ N+ A F RLP LLE +S D L E + +AV W+ + + + +L QVR P + L+ VE P++ + +C R V EA +Q+ Sbjct: 63 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACHDLALSARRFVLKNIVD--LAKGKDFERLPWKRLLEFVSDDALCVDKEETAYQIAVRWV------------KADLQRRMHYWPELLQQVRLPFVRRFYLLAHVESDPLVYLSPSCLRMVSEARSFQS 291
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_019129408.1 (PREDICTED: kelch-like protein 21 [Larimichthys crocea] >XP_010751685.2 PREDICTED: kelch-like protein 21 [Larimichthys crocea] >KKF16747.1 Kelch-like protein 21 [Larimichthys crocea]) HSP 1 Score: 107.1 bits (266), Expect = 1.800e-19 Identity = 78/243 (32.10%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGLT-HGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y C L+ +V+ N+ A F RLP LLE +S D L+ E V+ +A W++ R+ R E+ L QVR P + L+ VE P++ + C R V EA +Q+ Sbjct: 37 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDVLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACRELATSARRFVLKNIME--LAKGMDFERLPWKRLLEFVSDDELSVDKEETVYQIAARWVKADRKRRLHYWPEL------------LQQVRLPFVRRFFLLAHVESDPLVYLSPTCLRMVNEARSFQS 265
BLAST of NO01G03900 vs. NCBI_GenBank
Match: KPP58222.1 (hypothetical protein Z043_123972 [Scleropages formosus]) HSP 1 Score: 107.1 bits (266), Expect = 1.800e-19 Identity = 74/239 (30.96%), Postives = 117/239 (48.95%), Query Frame = 0 Query: 169 DVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGLT-HGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIM-QAEACQRFVLEAYRY 406 DVT VEG+ F HR +AA S AMF + +RE +E RI ++ +A +++L++ Y V +T+ N++ LE + F ++E C +FLA+A+ D +L LAD + PL Y+ H A F LP+ L+ LL D L+ E VF A+ W+ R+R + E + +L +R P + VE+VEG P++ ++ + EA RY Sbjct: 53 DVTLYVEGQEFACHRVVLAAASQYFRAMFCNNLREKHEDRIQIKGVEAETMKILLDYTYTSKVLITKQNVQKTLEAASLFQFLRMVEACSSFLANALLPDNCVGVLRLADAHSLVPLQACVQDYISQAFSH--VALHEEFLELPEEALVNLLKRDDLSVTEEEQVFEAAIRWV----RAR--------ETERLPTLPRLLQHIRLPLLNPWYFVEKVEGDPLVRRSPEAFNLLQEARRY 277
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_022532822.1 (kelch-like protein 21 [Astyanax mexicanus] >XP_022532823.1 kelch-like protein 21 [Astyanax mexicanus]) HSP 1 Score: 107.1 bits (266), Expect = 1.800e-19 Identity = 76/243 (31.28%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EG+ F HR +AA S AMF +RES R+ L + A L+++F Y G V +T DN++ +L+ + F + E CC FL + V I A+ Y C L+ +V+ N+ A F RLP LLE +S DGL E + +AV W+ + + + +L QVR P M L+ VE P++ + AC R V EA +Q+ Sbjct: 37 FFDVTLCAEGKEFHCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSAELLGLLVDFCYTGRVTVTHDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACRELAASARRFVLKNIVE--LAKGMDFERLPWKRLLEFVSDDGLCVDKEETAYQIAVRWV------------KADLQRRLHYWPELLQQVRLPFMRRFFLLAHVESDPLVYLSPACLRLVSEARSFQS 265
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_018974012.1 (PREDICTED: kelch-like protein 6 [Cyprinus carpio]) HSP 1 Score: 106.7 bits (265), Expect = 2.300e-19 Identity = 67/230 (29.13%), Postives = 110/230 (47.83%), Query Frame = 0 Query: 163 LRHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ 392 L + DV+ +V+G++F HR +AA S AMF + +RE +E I ++ +A +++L + Y V +T+DN++ +LE + F +++ C ++LA A+ D IL LAD + L Y++ N A LP +L+ LL HD L E VF+V W+ + +E + VL VR P + VE VEG P+++ Sbjct: 60 LEDSLIDVSLLVQGQSFQCHRVVLAAASHYFRAMFCNDLREKHEENINIKGINADTMRILLEYTYTSKVIITKDNVQRMLEAASLFQFPRIVDACASYLAEALHPDNCVGILHLADVHSLESLKAQVYTYIIQNFSQ--VADHDEILELPADVLVSLLQHDDLGVTEEEQVFDVVTRWV------------RAQHDERIAQLPRVLTHVRLPLLDPWYFVERVEGDPLIR 275
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_019644974.1 (PREDICTED: kelch-like protein 26 [Branchiostoma belcheri]) HSP 1 Score: 106.3 bits (264), Expect = 3.000e-19 Identity = 79/255 (30.98%), Postives = 128/255 (50.20%), Query Frame = 0 Query: 168 CDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGLTHG--EMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEA--VLGQVRFPHMPARLLVEEVEGHPIMQAE-ACQRFVLEAYRYQAVVPFPQQHCQ 418 CDVT V + + F AHR +A+ S AMF SGMRES+E+ + L+ A Q +L+F Y + L+ ++ V+ + V +I FL + + VD AI +A YD ++ +++ + + F LP + +LL D L HG E+ +F++A+ WL + + AR+ A V+ +RFP M LV++V+ IM ++ AC+RF+LEA+ YQ +P+ Q Q Sbjct: 33 CDVTLVADDQGFQAHRAVLASCSDYFKAMFTSGMRESSETHVELKGVSANGLQHVLDFAYTSRLGLSLQIVQDVIGAASHLQVLPIIVIVEKFLMAEINVDNCLAIGQIAANYDLSSVTNQVNNFILLHFKQ--VSQIDDFLSLPHERIADLLGSDWL-HGCSEVEIFHIALRWL---------------RHDPARMAHASQVMEHIRFPLMSPGDLVDQVQSVDIMDSDSACRRFLLEAFNYQ-TLPYRQHELQ 268
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_022096832.1 (kelch-like protein diablo [Acanthaster planci]) HSP 1 Score: 106.3 bits (264), Expect = 3.000e-19 Identity = 77/257 (29.96%), Postives = 119/257 (46.30%), Query Frame = 0 Query: 164 RHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEV-EGHPIMQAEACQRFVLEAYRYQAVVPFPQQHCQL 419 R CDVT VV+GR+ AHR +AA S AMF S +RE NE +TL+D D A Q ++NF Y V +T+DN++ VL+ + + +I CC FL + + I A+++ C L + + N C A + F L L++L+ D L E V+ + ++++ +EE V + VR P + L V E + + E C+ F EA RY A +P H ++ Sbjct: 66 RRELCDVTLVVQGRSILAHRLVLAACSPYFNAMFTSELRECNEKTVTLQDMDHVAIQEIVNFAYSAKVSVTEDNVQSVLKAACLLQIEPVIGLCCEFLKTQLHPSNCLGIRGFAERHGCFELQQAADAFAQQNF--CQVAQQEEFLHLGVEDLIDLIRRDALNVPKEEDVYEGVMRYVDQ------------NREERIPRVGEIFEHVRLPLLSWEFLHSRVKEDNVVTTDEKCKSFFDEARRYHASQFYPGLHWEV 308
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_007570823.1 (PREDICTED: kelch-like protein 21 [Poecilia formosa] >XP_007570829.1 PREDICTED: kelch-like protein 21 [Poecilia formosa] >XP_014872273.1 PREDICTED: kelch-like protein 21 [Poecilia latipinna] >XP_014872274.1 PREDICTED: kelch-like protein 21 [Poecilia latipinna] >XP_014872282.1 PREDICTED: kelch-like protein 21 [Poecilia latipinna] >XP_014872283.1 PREDICTED: kelch-like protein 21 [Poecilia latipinna] >XP_016536550.1 PREDICTED: kelch-like protein 21 [Poecilia formosa] >XP_016536552.1 PREDICTED: kelch-like protein 21 [Poecilia formosa]) HSP 1 Score: 105.9 bits (263), Expect = 4.000e-19 Identity = 76/243 (31.28%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y C L+ +V+ N+ A F RLP LLE +S D L E V+ +AV W+ + + + +L QVR P + L+ VE P++ + C R V EA +Q+ Sbjct: 37 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFTGTLRESVMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACRELATSARRFVLKNIME--LAKGTDFERLPWKRLLEFVSDDELCVDKEETVYQIAVRWV------------KADLQRRLHYWPELLQQVRLPFVRRFFLLAHVESDPLVYLSPTCLRMVNEARSFQS 265
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_008412760.1 (PREDICTED: kelch-like protein 21 [Poecilia reticulata] >XP_008412761.1 PREDICTED: kelch-like protein 21 [Poecilia reticulata]) HSP 1 Score: 105.9 bits (263), Expect = 4.000e-19 Identity = 76/243 (31.28%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y C L+ +V+ N+ A F RLP LLE +S D L E V+ +AV W+ + + + +L QVR P + L+ VE P++ + C R V EA +Q+ Sbjct: 37 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFTGTLRESVMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACRELATSARRFVLKNIME--LAKGTDFERLPWKRLLEFVSDDELCVDKEETVYQIAVRWV------------KADLQRRLHYWPELLQQVRLPFVRRFFLLAHVESDPLVYLSPTCLRMVNEARSFQS 265 The following BLAST results are available for this feature:
BLAST of NO01G03900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03900 ID=NO01G03900|Name=NO01G03900|organism=Nannochloropsis oceanica|type=gene|length=5356bpback to top protein sequence of NO01G03900.1 >NO01G03900.1-protein ID=NO01G03900.1-protein|Name=NO01G03900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bpback to top Synonyms
Publications
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