NO01G03900, NO01G03900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03900 vs. NCBI_GenBank
Match: EWM29327.1 (kelch-like protein 26 [Nannochloropsis gaditana]) HSP 1 Score: 540.8 bits (1392), Expect = 4.800e-150 Identity = 301/462 (65.15%), Postives = 339/462 (73.38%), Query Frame = 0 Query: 1 MLKTLASASSVPFASTLGSASQQLWQQGLFRSNTLRMRLRPLRAIVTFVLIVMALESRRQQR--RLSGILITLLASLQRSLESWQERLARLKRRSGGGYGALWAGRGGGKPFSGVFFWGGTGDEDXXXXXXXXXXXXXXXXXXXXVMLGDRGRARCSWMVRQQFLRHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGLTHGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQAEACQRFVLEAYRYQAVVPFPQQHCQLYQQQQQAQEEGESKWRPQQLHLPQQELLQKYALEMGVRARPR 461 M K AS+++ A + A QQ Q+GL +LR RL + I+TF+L+ +ALESRRQ R RLS IL L +QR + WQERL RL+ + G LWA G K FS VFFWGG DED V+LGDRGRARCSWMVRQQFLR AYCDV+FVVEG+ FPAHRCWVAAFS+PLCAMFNSGMRES ES I LRDTDAGAF+LMLNFIYGGPVEL QDNIE VLELSVRF+VGML+EQCCNFLASAVAVDTACAILILAD+YDC PL RDTLL++VA+LP CWAAAK H ARLP+ LLLE+LSHDGL HGE++ F AVYWLEEWRR+RPVEQDE EKEEE LVE VLGQVRFP+MPA LL EEVE HPIMQAEACQRF+LEAYRYQA+ Q QL + Q +G RP+ Q L+ KYA MGVRARPR Sbjct: 29 MFKVFASSTTGSSAKAISVAHQQFVQRGLSSLKSLRKRLVLVNVILTFLLLALALESRRQGRRHRLSRILWNLYLKVQRFIWPWQERLVRLQGLNAGS-RLLWASTGKCKAFSCVFFWGGAEDEDGGLKASLSTGDGDGGQCTRKVVLGDRGRARCSWMVRQQFLRRAYCDVSFVVEGKTFPAHRCWVAAFSLPLCAMFNSGMRESQESCILLRDTDAGAFELMLNFIYGGPVELNQDNIESVLELSVRFAVGMLMEQCCNFLASAVAVDTACAILILADRYDCRPLRRDTLLFLVAHLPQCWAAAKGHVARLPRHLLLEVLSHDGLDHGEIVAFRAAVYWLEEWRRTRPVEQDEAEKEEEEALVEEVLGQVRFPYMPAALLAEEVECHPIMQAEACQRFILEAYRYQAI----SQRGQLARPVQLGAGDG---GRPRFEGQRSQGLVHKYAEGMGVRARPR 482
BLAST of NO01G03900 vs. NCBI_GenBank
Match: CBJ25968.1 (similar to Kelch-like 2, Mayven (Drosophila) [Ectocarpus siliculosus]) HSP 1 Score: 180.6 bits (457), Expect = 1.300e-41 Identity = 106/269 (39.41%), Postives = 147/269 (54.65%), Query Frame = 0 Query: 146 LGDRGRARCSWMVRQQFLRHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLP-HCWAAAKPHFARLPQALLLELLSHDGLT---HGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQAEACQRFVLEAYRYQAVVP 411 LG RGR + A CDVT V G+ F AH+C +AA S PL AMF +E +E I L D + +F L+L+F Y VE+T +N+E +L+LS R+ V +L CC FLA + + TAC++L +AD+YDCH L R L Y + P C ++ F L AL++E+L D L GE+ VF A+ WLE ++ R + VL VRF + A+ L + VE HP+MQ+ A + FV AYRYQA+ P Sbjct: 135 LGARGRRAAFERFGELRRVGACCDVTLAVGGKHFKAHKCVLAAQSSPLRAMFEGSFKEGSEDVIALLDVEPSSFSLLLDFFYDRRVEVTDENVEALLDLSARYGVSLLRRHCCAFLAGSASPATACSLLSVADRYDCHRLRRVILAYTLERFPTTCRDSSSDGFRHLSAALVVEVLKDDRLAAGQEGELAVFWAAISWLE-------------AEQSRRRNADEVLSHVRFGLVSAKALADAVEAHPLMQSAAGKAFVHGAYRYQALPP 390
BLAST of NO01G03900 vs. NCBI_GenBank
Match: CBN74994.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.0 bits (297), Expect = 4.500e-23 Identity = 76/252 (30.16%), Postives = 123/252 (48.81%), Query Frame = 0 Query: 158 VRQQFLRHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDG-LTHGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQAEACQRFVLEAYRYQAV 409 +R+ + + CD+T VEG F AH+ +A L + S MRES + I L D + F+++L+++Y P+ + + +L L+ R+ V L +Q C+ L++ + D AC++ LAD + CH L + +V + A + L + L E+LS D L E +VF+ A WL S P R VLG VRFP M A LL + ++ H + CQ+ + EA+ + A+ Sbjct: 122 IRELYEKEQLCDITLSVEGEEFRAHKAVLACSKSFLGTLMMSNMRESTQDVIELEDISSRQFKILLDYMYNKPISVPSSQMMDLLSLANRYQVEGLKDQMCDALSTHLTHDNACSVFALADSHQCHTLKTEAFSKIVQHF--ALATRSDGWTALTKDQLSEVLSSDQVLDCDESVVFDAASRWL--LLDSSP---------SRRRFAPEVLGMVRFPLMDAGLLSDVIKDHEATKGPECQKLIAEAWEHHAL 360
BLAST of NO01G03900 vs. NCBI_GenBank
Match: KPP63588.1 (kelch-like protein 21-like [Scleropages formosus]) HSP 1 Score: 112.1 bits (279), Expect = 5.500e-21 Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR FP HR +AA S AMF +RES R+ L + L+++F Y G V + QDN++ +L+ + F + E CC FL + V I A+ Y CH L+ + + N+ A F RLP LLE LS DGL E + +AV W++ + R E+ L QVR P + L+ VE P++ + AC R V EA +Q+ Sbjct: 37 FFDVTLCAEGREFPCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSGELLGLLVDFCYTGRVTVAQDNVDLLLKAADLFQFPSVKEACCAFLEQRLDVSNCLEIQEFAEAYACHDLADSARRFALRNIAE--LAKGKEFERLPWKRLLEFLSDDGLCVDKEEAAYQLAVRWVKADPQRRLHHWPEL------------LQQVRLPFVRRFFLLAHVESDPLVYLSPACLRLVSEARAFQS 265
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_018615917.1 (PREDICTED: kelch-like protein 21 [Scleropages formosus] >XP_018615918.1 PREDICTED: kelch-like protein 21 [Scleropages formosus] >XP_018615919.1 PREDICTED: kelch-like protein 21 [Scleropages formosus]) HSP 1 Score: 112.1 bits (279), Expect = 5.500e-21 Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR FP HR +AA S AMF +RES R+ L + L+++F Y G V + QDN++ +L+ + F + E CC FL + V I A+ Y CH L+ + + N+ A F RLP LLE LS DGL E + +AV W++ + R E+ L QVR P + L+ VE P++ + AC R V EA +Q+ Sbjct: 37 FFDVTLCAEGREFPCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSGELLGLLVDFCYTGRVTVAQDNVDLLLKAADLFQFPSVKEACCAFLEQRLDVSNCLEIQEFAEAYACHDLADSARRFALRNIAE--LAKGKEFERLPWKRLLEFLSDDGLCVDKEEAAYQLAVRWVKADPQRRLHHWPEL------------LQQVRLPFVRRFFLLAHVESDPLVYLSPACLRLVSEARAFQS 265
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_016365603.1 (PREDICTED: kelch-like protein 6 isoform X1 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 109.4 bits (272), Expect = 3.600e-20 Identity = 68/230 (29.57%), Postives = 111/230 (48.26%), Query Frame = 0 Query: 163 LRHAYCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ 392 L + DV+ +V+G++F HR +AA S AMF + +RE +E I ++ DA +++L + Y V +T+DN++ +LE + F +++ C ++LA A+ D IL LAD + L Y++ N A LP +L+ LL HD L E VF+V W+ +++E + VL VR P + VE VEG P+++ Sbjct: 60 LEDSLIDVSLLVQGQSFQCHRVVLAAASHYFRAMFCTDLREKHEENINIKGIDADTMRILLEYTYTSKVIITKDNVQRMLEAASLFQFPRIVDACASYLAEALHPDNCVGILHLADVHSLESLKAQVYTYIIQNFSQ--VADHDEILELPADVLVSLLQHDDLGVTEEEQVFDVVTRWV------------RAQQDERIAQLPRVLTHVRLPLLDPWYFVERVEGDPLIR 275
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_006641983.1 (PREDICTED: kelch-like protein 21 [Lepisosteus oculatus] >XP_015192542.1 PREDICTED: kelch-like protein 21 [Lepisosteus oculatus] >XP_015192543.1 PREDICTED: kelch-like protein 21 [Lepisosteus oculatus] >XP_015192544.1 PREDICTED: kelch-like protein 21 [Lepisosteus oculatus] >XP_015192545.1 PREDICTED: kelch-like protein 21 [Lepisosteus oculatus]) HSP 1 Score: 109.0 bits (271), Expect = 4.700e-20 Identity = 79/243 (32.51%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR FP HR +AA S AMF +RES + L + A L+L+F Y G V ++QDN++ +L+ + F + E CC FL + V I A+ Y C L+ + + N+ A FARLP LLEL+S DGL E + +A W++ + R E+ L QVR P + L+ VE P++ + AC R V EA +Q+ Sbjct: 37 FFDVTLRAEGREFPCHRAVLAAASNYFKAMFAGTLRESAMDCVELHEVSAELLGLLLDFCYTGRVTVSQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACRGLAESARRFALRNVAE--LAGGKDFARLPWKRLLELVSDDGLCVDKEETAYQIAARWVKADPQRRLHRWPEL------------LQQVRLPFVRRFYLLAHVESDPLVYLSPACLRLVSEARAFQS 265
BLAST of NO01G03900 vs. NCBI_GenBank
Match: CDQ74866.1 (unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 109.0 bits (271), Expect = 4.700e-20 Identity = 77/243 (31.69%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y CH L+ +V+ N+ A F RLP LLE +S D L E V+ +AV W+ + + + +L QVR P + L+ VE P++ + +C R V EA +Q+ Sbjct: 48 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACHDLAVSARRFVLKNIVD--LAKGKDFKRLPWKRLLEFVSDDALCVDKEETVYQIAVRWV------------KADLQRRLHYWPTLLEQVRLPFVRRFYLLAHVESDPLVYLSPSCLRMVSEARSFQS 276
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_020362413.1 (kelch-like protein 21 [Oncorhynchus kisutch] >XP_020362414.1 kelch-like protein 21 [Oncorhynchus kisutch]) HSP 1 Score: 109.0 bits (271), Expect = 4.700e-20 Identity = 77/243 (31.69%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y CH L+ +V+ N+ A F RLP LLE +S D L E V+ +AV W+ + + + +L QVR P + L+ VE P++ + +C R V EA +Q+ Sbjct: 48 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACHDLAVSARRFVLKNIVD--LAKGKDFKRLPWKRLLEFVSDDALCVDKEETVYQIAVRWV------------KADLQRRLHYWPTLLEQVRLPFVRRFYLLAHVESDPLVYLSPSCLRMVSEARSFQS 276
BLAST of NO01G03900 vs. NCBI_GenBank
Match: XP_021472309.1 (kelch-like protein 21 [Oncorhynchus mykiss] >XP_024231944.1 kelch-like protein 21 [Oncorhynchus tshawytscha]) HSP 1 Score: 109.0 bits (271), Expect = 4.700e-20 Identity = 77/243 (31.69%), Postives = 114/243 (46.91%), Query Frame = 0 Query: 167 YCDVTFVVEGRAFPAHRCWVAAFSMPLCAMFNSGMRESNESRITLRDTDAGAFQLMLNFIYGGPVELTQDNIECVLELSVRFSVGMLIEQCCNFLASAVAVDTACAILILADKYDCHPLSRDTLLYVVANLPHCWAAAKPHFARLPQALLLELLSHDGL-THGEMMVFNVAVYWLEEWRRSRPVEQDEIEKEEEARLVEAVLGQVRFPHMPARLLVEEVEGHPIMQ-AEACQRFVLEAYRYQA 408 + DVT EGR F HR +AA S AMF +RES R+ L + A L+++F Y G V +TQDN++ +L+ + F + E CC FL + V I A+ Y CH L+ +V+ N+ A F RLP LLE +S D L E V+ +AV W+ + + + +L QVR P + L+ VE P++ + +C R V EA +Q+ Sbjct: 48 FFDVTLCAEGREFHCHRTVLAAASTYFRAMFAGTLRESAMDRVVLHEVSAELLGLLVDFCYTGRVTVTQDNVDLLLKTADLFQFPSVKEACCAFLEQRLDVSNCLEIQDFAEAYACHDLAVSARRFVLKNIVD--LAKGKDFKRLPWKRLLEFVSDDALCVDKEETVYQIAVRWV------------KADLQRRLHYWPTLLEQVRLPFVRRFYLLAHVESDPLVYLSPSCLRMVSEARSFQS 276 The following BLAST results are available for this feature:
BLAST of NO01G03900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03900 ID=NO01G03900|Name=NO01G03900|organism=Nannochloropsis oceanica|type=gene|length=5356bpback to top protein sequence of NO01G03900.1 >NO01G03900.1-protein ID=NO01G03900.1-protein|Name=NO01G03900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bpback to top Synonyms
Publications
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