NO01G03840, NO01G03840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03840 vs. NCBI_GenBank
Match: KXZ46647.1 (hypothetical protein GPECTOR_42RPS14 [Gonium pectorale]) HSP 1 Score: 246.9 bits (629), Expect = 5.200e-62 Identity = 122/150 (81.33%), Postives = 135/150 (90.00%), Query Frame = 0 Query: 48 KRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 K+G + ++LGP EGEHVFGVAHIFASFNDTFVHVTDLSGRET+SRVTGGMKVKADRDE+SPYAAMLAAQDVA KCKELGITA+HIK+RATGGN+TK+PGPGAQ ALRALAR+G+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 4 KKGKGEEDKPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 153
BLAST of NO01G03840 vs. NCBI_GenBank
Match: XP_021861490.1 (40S ribosomal protein S14 [Spinacia oleracea]) HSP 1 Score: 246.9 bits (629), Expect = 5.200e-62 Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 0 Query: 49 RGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 R T+ T+ LGP EGEHVFGVAHIFASFNDTF+HVTDLSGRETL R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 3 RNRKTREPKEETITLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
BLAST of NO01G03840 vs. NCBI_GenBank
Match: GAY33070.1 (hypothetical protein CUMW_005470, partial [Citrus unshiu]) HSP 1 Score: 246.9 bits (629), Expect = 5.200e-62 Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 0 Query: 31 PTNPQVFR-----LSHSSSKMAKRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 P VFR LS SS+ M++R T+ + LGP +GEHVFGVAHIFASFNDTF+HVTDLSGRETL R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 32 PAAASVFRGFCDQLSVSSAAMSRR--KTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 201
BLAST of NO01G03840 vs. NCBI_GenBank
Match: EMS67175.1 (40S ribosomal protein S14 [Triticum urartu]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 126/164 (76.83%), Postives = 138/164 (84.15%), Query Frame = 0 Query: 34 PQVFRLSHSSSKMAKRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 P V + H S K T+ + LGP EGEHVFGVAHIFASFNDTF+HVTDLSGRETL R+TGGMKVKADRDE+SPYAAMLA+QDVAV+CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTPVPTDSTRRK GRRGRRL Sbjct: 19 PPVQCIGHRKSGRKK----TREPKEENVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAVRCKELGITALHIKLRATGGNKTKTPGPGAQAALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 178
BLAST of NO01G03840 vs. NCBI_GenBank
Match: XP_010683691.1 (PREDICTED: 40S ribosomal protein S14-2 [Beta vulgaris subsp. vulgaris] >KMT06755.1 hypothetical protein BVRB_7g159150 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = 0 Query: 53 TKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 TK T+ LGP EGEHVFGVAHIFASFNDTF+HVTDLSGRETL R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 6 TKEPKEETVTLGPTVKEGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
BLAST of NO01G03840 vs. NCBI_GenBank
Match: XP_006631947.2 (PREDICTED: 40S ribosomal protein S14 [Lepisosteus oculatus]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 123/155 (79.35%), Postives = 141/155 (90.97%), Query Frame = 0 Query: 43 SSKMAKRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 SS+MA R G K ++ ++LGP+ AEGE+VFGV HIFASFNDTFVHVTDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA +CKELGITA+HIK+RATGGN+TK+PGPGAQ ALRALARSG+KIGRIEDVTP+P+DSTRRK GRRGRRL Sbjct: 8 SSEMAPRKGKEKKEEQ-VISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 161
BLAST of NO01G03840 vs. NCBI_GenBank
Match: XP_020260383.1 (40S ribosomal protein S14-3 [Asparagus officinalis] >ONK71299.1 uncharacterized protein A4U43_C04F7040 [Asparagus officinalis]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 124/152 (81.58%), Postives = 136/152 (89.47%), Query Frame = 0 Query: 46 MAKRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 M+KR +D+ T LGP EGEHVFGVAHIFASFNDTF+HVTDLSGRETL R+TGGMKVKADRDE+SPYAAMLAAQDVA +CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 1 MSKRKTREPKEDNVT--LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
BLAST of NO01G03840 vs. NCBI_GenBank
Match: XP_021765192.1 (40S ribosomal protein S14-2 [Chenopodium quinoa] >XP_021766528.1 40S ribosomal protein S14-2 [Chenopodium quinoa]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 124/152 (81.58%), Postives = 136/152 (89.47%), Query Frame = 0 Query: 46 MAKRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 M+KR TK T+ LGP EGEHVFGVAHIFASFNDTF+HVTDLSGRETL R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 1 MSKR--KTKEPKVETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
BLAST of NO01G03840 vs. NCBI_GenBank
Match: GAX73198.1 (hypothetical protein CEUSTIGMA_g651.t1 [Chlamydomonas eustigma]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 121/137 (88.32%), Postives = 130/137 (94.89%), Query Frame = 0 Query: 61 LNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 + LGP EGEHVFGVAHIFASFNDTFVHVTDLSGRET+SRVTGGMKVKADRDE+SPYAAMLAAQDVA KCKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALAR+G+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 14 VTLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARTGIKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
BLAST of NO01G03840 vs. NCBI_GenBank
Match: PPR89531.1 (hypothetical protein GOBAR_AA31162 [Gossypium barbadense]) HSP 1 Score: 246.5 bits (628), Expect = 6.900e-62 Identity = 125/162 (77.16%), Postives = 139/162 (85.80%), Query Frame = 0 Query: 36 VFRLSHSSSKMAKRGGATKLDDSTTLNLGPKAAEGEHVFGVAHIFASFNDTFVHVTDLSGRETLSRVTGGMKVKADRDEASPYAAMLAAQDVAVKCKELGITAVHIKMRATGGNKTKSPGPGAQHALRALARSGLKIGRIEDVTPVPTDSTRRKSGRRGRRL 198 VF LS S + R + + T NLGP EGEHVFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ +CKELGITA+HIK+RATGGNKTK+PGPGAQ ALRALARSG+KIGRIEDVTP+PTDSTRRK GRRGRRL Sbjct: 26 VFELSFSFPESMSRRKVREPKEENT-NLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 186 The following BLAST results are available for this feature:
BLAST of NO01G03840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03840 ID=NO01G03840|Name=NO01G03840|organism=Nannochloropsis oceanica|type=gene|length=1443bpback to top protein sequence of NO01G03840.1 >NO01G03840.1-protein ID=NO01G03840.1-protein|Name=NO01G03840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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