NO01G03820, NO01G03820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03820 vs. NCBI_GenBank
Match: EXX52167.1 (Mus81p [Rhizophagus irregularis DAOM 197198w] >GBC51639.1 Crossover junction endonuclease MUS81 [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 92.8 bits (229), Expect = 5.400e-15 Identity = 84/328 (25.61%), Postives = 151/328 (46.04%), Query Frame = 0 Query: 530 WEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVR--PPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAG---QRQSLGRVAALNIYKMY 850 +EV+L+LD RE I+ L Q G++ +R L+LGD++WV +VL Y+ ERK + DL +SIKDGR++EQK R+ G + + YL+E L ++ A+++AM +TQ+++G + RT ++DQ+I L+RM + K + N I G ++ ++++L + + +S Y + K+ L+++ F+ L I +S K+ IV +YPTPH L A + +E + + V G +R+++G + +Y+++ Sbjct: 319 FEVILILDNREVKLKKDRDYIQDTLQQKGLKISVRNLELGDVIWV-------------------------------------ARKYNSFTQEEIVLDYIIERKRMDDLVSSIKDGRFREQKFRLSRSG--IGQIIYLIED--YNLKEVAEFGIDAIKSAMTSTQVLNGFFLKRTGAIDQSIDYLVRMTNML---KKLYENKTIYSIPDGAIYRANFLD-LKQNLATIYTNRTFHVSFASYSDLNSKSK-SLTLKDTFIKFLMTIRGLSAEKAAEIVKIYPTPHHLFDAFDFLDNEEEKKKML-MNVGGNMIRRKNIGSALSEKVYQIW 599
BLAST of NO01G03820 vs. NCBI_GenBank
Match: PKC03593.1 (hypothetical protein RhiirA5_363089 [Rhizophagus irregularis] >PKK61362.1 hypothetical protein RhiirC2_760766 [Rhizophagus irregularis] >POG55179.1 hypothetical protein GLOIN_2v1739788 [Rhizophagus irregularis DAOM 181602=DAOM 197198] >POG55181.1 hypothetical protein GLOIN_2v1739767 [Rhizophagus irregularis DAOM 181602=DAOM 197198] >POG81943.1 hypothetical protein GLOIN_2v1503856 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 92.8 bits (229), Expect = 5.400e-15 Identity = 84/328 (25.61%), Postives = 151/328 (46.04%), Query Frame = 0 Query: 530 WEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVR--PPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAG---QRQSLGRVAALNIYKMY 850 +EV+L+LD RE I+ L Q G++ +R L+LGD++WV +VL Y+ ERK + DL +SIKDGR++EQK R+ G + + YL+E L ++ A+++AM +TQ+++G + RT ++DQ+I L+RM + K + N I G ++ ++++L + + +S Y + K+ L+++ F+ L I +S K+ IV +YPTPH L A + +E + + V G +R+++G + +Y+++ Sbjct: 297 FEVILILDNREVKLKKDRDYIQDTLQQKGLKISVRNLELGDVIWV-------------------------------------ARKYNSFTQEEIVLDYIIERKRMDDLVSSIKDGRFREQKFRLSRSG--IGQIIYLIED--YNLKEVAEFGIDAIKSAMTSTQVLNGFFLKRTGAIDQSIDYLVRMTNML---KKLYENKTIYSIPDGAIYRANFLD-LKQNLATIYTNRTFHVSFASYSDLNSKSK-SLTLKDTFIKFLMTIRGLSAEKAAEIVKIYPTPHHLFDAFDFLDNEEEKKKML-MNVGGNMIRRKNIGSALSEKVYQIW 577
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_008608829.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC37896.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 92.4 bits (228), Expect = 7.100e-15 Identity = 70/201 (34.83%), Postives = 93/201 (46.27%), Query Frame = 0 Query: 528 EEWEVVLLLDRRE--HDKNPSI-ERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNV 726 +EWEVVLLLD RE NPS+ ER L++AGV CE+R L LGDM+W+ VL + ERK V DLA SI D RY EQK R+ G + YL+EG+ + IV AL TA+ TQ+++ V S D+T++ L +H V+E+ T V Sbjct: 274 DEWEVVLLLDHREMVSRSNPSVFERKLLEAGVTCEVRGLHLGDMIWI--------------------------------ARRHRPTFGGRPITEEFVLDVVVERKAVTDLAMSIIDKRYTEQKQRLADTG--LRYVVYLLEGSL-AVETIVSATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRELSTVYKV 439
BLAST of NO01G03820 vs. NCBI_GenBank
Match: PSN46179.1 (Crossover junction endonuclease MUS81 [Blattella germanica]) HSP 1 Score: 92.4 bits (228), Expect = 7.100e-15 Identity = 83/328 (25.30%), Postives = 136/328 (41.46%), Query Frame = 0 Query: 530 WEVVLLLDRREHDKNP--------SIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMY 850 ++++LL+D++E P +I R L G + ELR L++GD W+ +VL ++ ERK + DLA SI+DGRY EQK R+ G + YLVE + + + P+L A TQI+ V +T ++ +T+ L M +++ V C E C + ++ E+ K L Q+MF+ QL +N +S AK++AIV+ YPTP L A +E+ LA + ++ +G V + +IY++Y Sbjct: 239 FDIILLVDKQETVGGPLPKLVQEDAIVRELTVTGTQFELRHLKVGDYTWI---------------------------------------CRDRRTNKEMVLPFIVERKRMDDLAKSIRDGRYHEQKFRLKQCG--IQNLIYLVESHGDNTHTTLPLPSLEQAAVNTQIVDRFSVKKTSNVHETVLYLATMTRLLIKFYSKKTIVKC--------------ERENLPPCLITDDLMSLMMFAEFNNSSSKRK-VLGTQSMFIKQLVQLNGMSVAKAQAIVNSYPTPRVLMAAYQEVGA-AGEKLLATIRYGPMKRMIGPVISKSIYQLY 509
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_012213415.1 (hypothetical protein SPRG_18588 [Saprolegnia parasitica CBS 223.65] >KDO15876.1 hypothetical protein SPRG_18588 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 91.7 bits (226), Expect = 1.200e-14 Identity = 89/323 (27.55%), Postives = 139/323 (43.03%), Query Frame = 0 Query: 528 EEWEVVLLLDRRE--HDKNPSI-ERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYK 848 +EWE+VLLLD RE N S+ ER L++AGV CE+R L LGDMMW+ VL + ERK V DLA SI D RY EQK R+ G + YL+EG+ + I+ AL TA+ TQ+++ V S D+T++ L +H V+ V R GR+ + L P+ S GE+ E +K A + + ++ + L + +S +++ + + +PT +L + E A +LP + ++GR N+++ Sbjct: 83 DEWEIVLLLDHREMVSRSNKSVFERKLLEAGVTCEVRGLHLGDMMWI--------------------------------ARRHRPTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAG--LRYVVYLLEGSL-AVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKV--RNAAPPTAASIGRLPACLRDF--TQLIPTTWQSFGEFNETFRKKAAPTTGE-LYQMMLMQVPGISATRARDLGAAHPTFLSLWQ--------ETQKAAPQLP--SRVNAVGRAVVTNLFR 355
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_012202810.1 (hypothetical protein SPRG_08175 [Saprolegnia parasitica CBS 223.65] >KDO26372.1 hypothetical protein SPRG_08175 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 90.1 bits (222), Expect = 3.500e-14 Identity = 88/323 (27.24%), Postives = 136/323 (42.11%), Query Frame = 0 Query: 528 EEWEVVLLLDRREHDKNPS---IERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYK 848 +EWE+VLLLD RE S ER L++AGV CE+R L LGDMMW+ VL + ERK V DLA SI D RY EQK R+ G + YL+EG+ + I+ AL TA+ TQ+++ V S D+T++ L +H V+ V R GR + L P+ S GE+ E +K A + + ++ + L + +S +++ + + +PT +L + E A +LP + ++GR N+++ Sbjct: 274 DEWEIVLLLDHREMVSRSSKSVFERKLLEAGVTCEVRGLHLGDMMWI--------------------------------ARRHRPTFGGRPIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAG--LRYVVYLLEGSL-AVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKV--RNAAPPVAASIGRPPACLRDF--TQLIPTTWQSFGEFNETFRKKAAPTTGE-LYQMMLMQVPGISATRARDLGAAHPTFLSLWQ--------ETQKAAPQLP--SRVNAVGRAVVTNLFR 546
BLAST of NO01G03820 vs. NCBI_GenBank
Match: SBS88773.1 (crossover junction endonuclease MUS81, putative [Plasmodium malariae]) HSP 1 Score: 89.4 bits (220), Expect = 6.000e-14 Identity = 66/224 (29.46%), Postives = 113/224 (50.45%), Query Frame = 0 Query: 621 VLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVE---GTFEQLNDIVRPP--ALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGR 840 VL+++ ERKT+ DL+ASI DGRY EQK R++ +E+ YL+E +F+ + + P L A +TQ+++G +L + ++ T LL MH +I+Q +K + ++ G EY+ H L L SL ++ K + + V+ +F QL IN ++ I+S++PTP L +A+ + + D +A K R +G+ Sbjct: 1145 VLKWIVERKTLNDLSASIVDGRYDEQKYRLMR-SREIYHIIYLIENSNNSFKNYMNSTKVPYEMLTNAQHSTQLVNGFSILNSENMKHTFFLLCEMHIQIIQNIKEYCHI-------------GENEYI-LHSDKLSLYLKNNASLWDHWNNESKKSKNNIVKEVFGKQLRLINMCGSEATELILSLWPTPFKLYEALNKYTYDGILAEKIKRIYLKNRDIIGK 1353
BLAST of NO01G03820 vs. NCBI_GenBank
Match: SCO94079.1 (crossover junction endonuclease MUS81, putative [Plasmodium malariae]) HSP 1 Score: 89.4 bits (220), Expect = 6.000e-14 Identity = 66/224 (29.46%), Postives = 113/224 (50.45%), Query Frame = 0 Query: 621 VLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVE---GTFEQLNDIVRPP--ALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGR 840 VL+++ ERKT+ DL+ASI DGRY EQK R++ +E+ YL+E +F+ + + P L A +TQ+++G +L + ++ T LL MH +I+Q +K + ++ G EY+ H L L SL ++ K + + V+ +F QL IN ++ I+S++PTP L +A+ + + D +A K R +G+ Sbjct: 1145 VLKWIVERKTLNDLSASIVDGRYDEQKYRLMR-SREIYHIIYLIENSNNSFKNYMNSTKVPYEMLTNAQHSTQLVNGFSILNSENMKHTFFLLCEMHIQIIQNIKEYCHI-------------GENEYI-LHSDKLSLYLKNNASLWDHWNNESKKSKNNIVKEVFGKQLRLINMCGSEATELILSLWPTPFKLYEALNKYTYDGILAEKIKRIYLKNRDIIGK 1353
BLAST of NO01G03820 vs. NCBI_GenBank
Match: OEU14539.1 (hypothetical protein FRACYDRAFT_241086 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 89.4 bits (220), Expect = 6.000e-14 Identity = 122/336 (36.31%), Postives = 184/336 (54.76%), Query Frame = 0 Query: 530 WEVVLLLDRREHDKNPSIERGLIQAGVRCELRVLQLGDMMWV--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEM------KTFLN-VACRGIGGGGGEEGGRVEYMEKHLCAL-----PLPP---SRIISLGEYQERCK--KTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIY 847 W+++LL+D REH K+ + Q G+ CE R L +GDM W+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++ + ERK V DLA+S+ RY EQ+ R+ G + + +LVEG ++ L+ AM T++ G +++T L T+S+L +H+RIVQ KT N +A GGG + GR + L + P+PP R I+ E + + + + G S++ + L L I +S K A+ + YPT ++L ++ ++ + + + + R ++G +A +Y Sbjct: 221 WKIILLIDGREH-KSKQVVSSCKQVGIPCEERHLAIGDMAWIARCVLPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIEILVGTIIERKDVADLASSLYGTRYAEQRLRLSQCG--LPQVLFLVEGDLHSCSN-CPAETLQMAMMETRVNLGFQIVQTKHLTDTVSVLKTLHSRIVQRTFPEAFGKTSKNSMALPTFGGGNRRDRGRGDRRASSLLEMSFDTPPVPPFGTKRFITYPELKAKVEIDRERGTRSIRAITLAMLKQIPTLSHKKCTAMSNAYPTMNSLLDSLSYHNDGDPKTLIRNIEIENGR-TIGPNSASEVY 551
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_022828309.1 (crossover junction endonuclease MUS81 [Spodoptera litura]) HSP 1 Score: 89.4 bits (220), Expect = 6.000e-14 Identity = 72/232 (31.03%), Postives = 115/232 (49.57%), Query Frame = 0 Query: 620 VVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRP-PALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRI-VQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMY 850 +VL Y+ ERK + DLAASIKDGR+ EQK R+ G + YLVE +++ + P P+L A+ T++ G V T SL+Q++ L M R+ ++ K L GGEE + M+ +P + + EY + L+V+ F+ L + VS K+ AI + YPTPH+L A + + E LA L Q +++G + ++Y ++ Sbjct: 388 LVLPYVVERKRMDDLAASIKDGRFHEQKFRLRRCG--LKNVIYLVE-KYDKNKGLGLPLPSLLQALTNTRVQDGFKVRSTNSLNQSVRFLAMMTKRLTIRYGKMTLR--------NGGEECDDSDDMK-----FIIPQAVKLMTFEYFNKSSAKTKPLTVKDTFIKLLLQLKGVSVEKALAITNRYPTPHSLIVAYYKCDQQEGEILLASLKYGDQTRNIGPALSKSVYHLF 603 The following BLAST results are available for this feature:
BLAST of NO01G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03820 ID=NO01G03820|Name=NO01G03820|organism=Nannochloropsis oceanica|type=gene|length=2902bpback to top protein sequence of NO01G03820.1 >NO01G03820.1-protein ID=NO01G03820.1-protein|Name=NO01G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=851bpback to top Synonyms
Publications
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