NO01G03820, NO01G03820 (gene) Nannochloropsis oceanica

Overview
NameNO01G03820
Unique NameNO01G03820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2902
Alignment locationchr1:1025210..1028111 -

Link to JBrowse

Properties
Property NameValue
DescriptionCrossover junction endonuclease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1025210..1028111 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0004519endonuclease activity
GO:0004518nuclease activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like
IPR027421DNA_pol_X_lyase_dom
IPR006166ERCC4_domain
Vocabulary: Biological Process
TermDefinition
GO:0090305nucleic acid phosphodiester bond hydrolysis
Homology
BLAST of NO01G03820 vs. NCBI_GenBank
Match: EWM29322.1 (crossover junction endonuclease [Nannochloropsis gaditana])

HSP 1 Score: 357.1 bits (915), Expect = 1.500e-94
Identity = 269/782 (34.40%), Postives = 324/782 (41.43%), Query Frame = 0
Query:   84 MAGDAVSVKAWNARLVAYINTLENEATRRGSQLRYAYKNVAKALANFPTRITTAKEAQQIKGVGPTIGRQLENFVNNKLLPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGKGCSEKELG-SQGSLNEMMEDLLVASQLSASFPDMEETHPAENKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWGLATSTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPMTLARLHRLCKHFEGSQVEEWEVVLLLDRREHDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVAC--------------RGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMYR 851
            M  DA S+K WN RLVAY+ TLE  A RRGSQLRY YK+VAKALA  PTR+TTA+EA+Q+KGVGPTIGRQLENF+ N L  E                            +D K  S  E   S   L+EMMEDLLVASQ S    + E  +P E+                                                                                                 I G  T                                                                                                                                                                      GP + + L RL + F G++ EEWEVV LLDR EH+ NPSIE  L+QAG+ CE+RVL+L D++WV                                                ++LRYM ERKTV DLA+SIKDGRY+EQKGRMLGVG+E+DR+FYLVEG  EQLND +RP ALRTA+ +TQ++HG+PVL+T SLDQTI+LL RMHTRI  E   FL  AC                   G  +     EY++KH    PLP SRII L EYQ  C+KT G+LSV+ MF  QLCAI+KVSEAKSKA+V+ Y TP  LA AM+ ++E+EAVAALA LPV GQRQS+GRVAA NIY +YR
Sbjct:    1 MEEDASSIKVWNNRLVAYVKTLELGAARRGSQLRYTYKSVAKALAKHPTRVTTAEEARQLKGVGPTIGRQLENFIVNTLHAE--------------AHAPKSPLPSDRAKADDKAVSVDEASFSVAYLDEMMEDLLVASQTSTCSANTEAQYPLED-----PNREMGTNPDTWSSRVDAPGCQSTDLSDANLLVVSDDESHECEGHGREEEGGKNKENLNVFPGAIERSAPWSSHEARRIHVVDVSDGESDGAIGGTCTG-----------------------------------------------------------------------------LDEGEEGEGGRATGGEGKDVHEVIGTGGERQASGSSSPRVPDGKGRKRKFFSRPEWQGGVEVEGVMGKGCQDVVGGRWWEESKVADVQGPSSRSLLDRLEETFGGTRPEEWEVVALLDRVEHENNPSIEATLLQAGICCEVRVLRLADVLWV-----ARRRAEGRLGGDGGGRAAPGIAVEPGNAGSMREGGHPKEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDAIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRISHEFAHFLQAACGHNRLNSEGDFLPATESFDGVAQSERLSEYLQKHSKTFPLPASRIIPLAEYQHLCRKTVGNLSVRAMFTAQLCAIDKVSEAKSKAVVNAYSTPSRLALAMQSITEEEAVAALAVLPVPGQRQSVGRVAATNIYHVYR 681          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: CBN78791.1 (ERCC4 domain containing protein [Ectocarpus siliculosus])

HSP 1 Score: 117.9 bits (294), Expect = 1.600e-22
Identity = 91/297 (30.64%), Postives = 133/297 (44.78%), Query Frame = 0
Query:  527 VEEWEVVLLLDRREHDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVA 824
            + +WE  L++D REH+   S++  L+Q G+RCE R L LGDM+W+                                                V+L Y+ ERKT  DLA+SI DGRY+EQK R+   G  + R  YLVEG       +  P ALRTA+ ++Q   GL V++  SL  T+  L R H  I     + L  +CR  G G    GG  E         P      ++ GEY + C K AG  +V+ +    +      S A+++AIV  + +P  L  A+   +  + +A
Sbjct:  253 IGQWEAWLIVDNREHE-FMSVQSSLLQKGIRCETRQLPLGDMLWI--------------------------------------ARRGDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSG--LRRRIYLVEGNLNHQEQLA-PAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIA----SLLEQSCRR-GAGLWPVGGSRECSGAGAMLRP-----AMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAANGDGLA 497          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: GBG23952.1 (Crossover junction endonuclease MUS81 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 106.7 bits (265), Expect = 3.600e-19
Identity = 100/335 (29.85%), Postives = 139/335 (41.49%), Query Frame = 0
Query:  523 EGSQVEEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDL-SVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALA----KAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMY 850
            E  +  EWE+VLL+D RE    DK    +  L + GV  E RVL LGD MW+                                                 VL Y+ ERK V DL  SIKDGRY EQK R+   G  + R  YLVEG       I++P ALRTAMA TQ+  G  V+   ++ +T+  L RMH R+++       VA       G        Y   H                         G L SV  +F  QL  I   S  ++ AI+  YPTP +L     + ++ + E+   +    + + GQ Q+LG VA+ N++ ++
Sbjct:  293 EADRPHEWELVLLIDMREGSGRDKT-IFQSKLFEHGVNIEKRVLSLGDAMWI------------------------------------VRRKLMDGKTEEYVLDYIIERKEVSDLGTSIKDGRYSEQKYRLQRCG--LSRVIYLVEGE-PSHQSILKPQALRTAMAETQVRDGFTVMHVLNVMETVEYLSRMH-RLIESS----TVATSQNKWSGPARDSWRRYENFH--------------------AANVKGKLRSVNEIFGAQLKQIKGFSGMRAAAILEKYPTPRSLLELFDEGLKNVPEEYKQSFFQNMEIPGQLQNLGPVASTNLFHVF 562          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_008608828.1 (hypothetical protein SDRG_04914 [Saprolegnia diclina VS20] >EQC37895.1 hypothetical protein SDRG_04914 [Saprolegnia diclina VS20])

HSP 1 Score: 99.0 bits (245), Expect = 7.600e-17
Identity = 84/281 (29.89%), Postives = 125/281 (44.48%), Query Frame = 0
Query:  528 EEWEVVLLLDRRE--HDKNPSI-ERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPT 806
            +EWEVVLLLD RE     NPS+ ER L++AGV CE+R L LGDM+W+                                                 VL  + ERK V DLA SI D RY EQK R+   G  +    YL+EG+   +  IV   AL TA+  TQ+++   V    S D+T++ L  +H   V+E+ T   V  R          GR     ++     L P+   S G + E  +K A   + + ++ + L  +  +S  +++ + + +PT
Sbjct:  274 DEWEVVLLLDHREMVSRSNPSVFERKLLEAGVTCEVRGLHLGDMIWI--------------------------------ARRHRPTFGGRPITEEFVLDVVVERKAVTDLAMSIIDKRYTEQKQRLADTG--LRYVVYLLEGSL-AVETIVSATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRELSTVYKV--RNAAPPAAASVGRPPASLRNF--TQLIPTNWQSFGAFNETFRKKAAPTTGE-LYQMMLMQVPGISAGRARELGAAHPT 514          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: ORY04066.1 (putative DNA repair protein Mus81 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 97.4 bits (241), Expect = 2.200e-16
Identity = 91/329 (27.66%), Postives = 150/329 (45.59%), Query Frame = 0
Query:  530 WEVVLLLDRREHDKNPS---IERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGT-FEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKT--FLNVACRGIGGGGGEEGGRVEY--MEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPV-AGQRQSLGRVAALNIYKMY 850
            +E+V++LD RE  +      I++ L + GV    R L+LGD++WV                                                + L Y+ ERK + DL ASIKDGR+KEQK R+   G    +  YLVEG   +         A++TA+++TQ++ G  + +T S+D++I+ L RM TR +Q M T   L+V    +         +  Y  + +HL  L       I+ G Y +   K +G LS+Q +F+  L     ++  K+  I   YPTP +L  A   +  +EA   + K    A +R+++G   +  +Y+++
Sbjct:  286 FEIVMILDNREVAQKSDRGYIQKELERRGVPVHTRNLELGDVLWV------------------------------------ARQLNCGGSEEEIFLGYVVERKRMDDLVASIKDGRFKEQKFRLKNCG--ASQIVYLVEGNEADGTRAFGGSTAIQTAISSTQVVDGFFLKKTDSVDESINYLSRM-TRQLQSMYTESVLHVIPDSL-------VNKATYLALREHLAGLEPGKEFHITYGSYCQLNSK-SGSLSLQDLFIKMLVTTRGITAEKAYEIAKRYPTPKSLFDAYDSLDSEEAKKHMLKDNARAVRRKNIGAALSERLYRVW 567          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: OAO18109.1 (MUS81, Subunit of structure-specific Mms4p-Mus81p endonuclease [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 96.7 bits (239), Expect = 3.800e-16
Identity = 88/306 (28.76%), Postives = 132/306 (43.14%), Query Frame = 0
Query:  525 SQVEEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAK 828
            ++ E WEV+LLLD RE         ++  L+QAGV C++R L LGDM WV                                                V+L  + ERK V DLA SI DGR+ EQ+ R+L  G  V R  YLVEG      D++ P +L+TA+  T +  G+ V ++ S+D T+  L  +   +  E++ F            G+E           C   L P R ++   +QE+  KT G   ++ ++  QL  I + + AK+  I   YPT   L +A   +  ++    L K
Sbjct:  172 AEAEAWEVLLLLDNREVRTKKDRDFLKNQLVQAGVECDVRNLSLGDMQWV---------------------------------------LRRPRDGVEVMLNVLVERKNVRDLAMSIMDGRFNEQQFRLLRCG--VRRVVYLVEGALRS-QDVMPPDSLQTAIMMTVVHRGIYVYQSTSIDDTVVFLKELTDVVKGEVERFF---------ATGDE----------TC---LHPQR-MAYEAFQEQFAKTKGS-KLKHLWCKQLRQIPRCTVAKTLIIAKQYPTMATLLRAYERLGTEKEKEDLLK 411          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_008867324.1 (hypothetical protein H310_04658 [Aphanomyces invadans] >ETW04368.1 hypothetical protein H310_04658 [Aphanomyces invadans])

HSP 1 Score: 95.9 bits (237), Expect = 6.400e-16
Identity = 66/197 (33.50%), Postives = 85/197 (43.15%), Query Frame = 0
Query:  530 WEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFL 724
            WE+VLLLD RE          ER L++A V CE+R L +GDM+W+                                                 VL  + ERK V DLA+SI D RY EQK R+   G  +    YLVEG+FE  +  +R   L+TAM  TQ+ H   V    S D+T+  L  +H  IV    T L
Sbjct:  265 WEIVLLLDHREMISRTNRSVFERKLLEANVACEVRSLNIGDMIWI----------------------------------ARSPTRLLNGKPEEYVLEVVVERKNVSDLASSIMDKRYTEQKARLKQTG--LRYVIYLVEGSFESQSTCIRSGGLQTAMTRTQVQHNFLVYHGTSHDETVGFLASLHRHIVHAFHTTL 425          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: OBZ86660.1 (Crossover junction endonuclease MUS81 [Choanephora cucurbitarum])

HSP 1 Score: 93.2 bits (230), Expect = 4.200e-15
Identity = 83/307 (27.04%), Postives = 136/307 (44.30%), Query Frame = 0
Query:  528 EEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLL---RMHTRIVQEMKTFL---NVACR----GIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEA 822
            +++E+VL++D RE     K    E+ L   GV C  R L LGD +W+                                                + L Y+ ERK + DL +SIKDGR+ EQK R+   G E  +  Y+VE    +  +     A++TAM++TQII G+ + RT S+D TI  L+   R+  RI +  + ++   ++  R    G+ G      G + Y              +I+   Y +   K  G  S+  ++L  L  I  V+  ++ +++ +YPTP +L +A R +S D+A
Sbjct:  696 DQYEIVLVIDSREIQMKGKRDYFEQTLTAKGVSCITRSLDLGDAIWI--------------------------------------ARSKSNPPQELFLDYIVERKRLDDLVSSIKDGRFTEQKLRLKRSGAE--KLIYVVEEYNREEAERFGAQAIQTAMSSTQIIDGIFLKRTSSIDDTIDYLVSITRLIERIYRNTRLYIIPSHLITRQNYLGLKGACPRRQGEIAY--------------VITYTLYNQLNAKN-GSASLHEVYLRMLMTIRGVNAERALSLMKIYPTPRSLLEAFRGLSPDKA 947          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: PKY54845.1 (hypothetical protein RhiirA4_502602 [Rhizophagus irregularis])

HSP 1 Score: 93.2 bits (230), Expect = 4.200e-15
Identity = 84/328 (25.61%), Postives = 151/328 (46.04%), Query Frame = 0
Query:  530 WEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVR--PPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAG---QRQSLGRVAALNIYKMY 850
            +EV+L+LD RE         I+  L Q G++  +R L+LGD++WV                                                +VL Y+ ERK + DL +SIKDGR++EQK R+   G  + +  YL+E     L ++      A+++AM +TQ+++G  + RT ++DQ+I  L+RM   +    K + N     I  G       ++ ++++L  +    +  +S   Y +   K+   L+++  F+  L  I  +S  K+  IV +YPTPH L  A   +  +E    +  + V G   +R+++G   +  +Y+++
Sbjct:  317 FEVILILDNREVKLKKDRDYIQDTLQQKGLKISVRNLELGDVIWV-------------------------------------ARKYNSFTQEEIVLDYIIERKRMDDLVSSIKDGRFREQKFRLSRSG--IGQIIYLIED--YNLKEVAEFGIDAIKSAMTSTQVLNGFFLKRTGAIDQSIDYLVRMTNML---KKLYENKTIYSIPDGAIYRANFLD-LKQNLATIYTSRTFHVSFASYSDLNSKSK-SLTLKDTFIKFLMTIRGLSAEKAAEIVKIYPTPHHLFDAFDFLDNEEEKKKML-MNVGGNMIRRKNIGSALSEKVYQIW 597          
BLAST of NO01G03820 vs. NCBI_GenBank
Match: EPB82577.1 (hypothetical protein HMPREF1544_10661 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 92.8 bits (229), Expect = 5.400e-15
Identity = 78/297 (26.26%), Postives = 132/297 (44.44%), Query Frame = 0
Query:  528 EEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEA 822
            EE+E++L+LD RE          +  L   GV C  R + LGD++W+                                                + L Y+ ERK + DL +SIKDGR+ EQK R+   G   ++  Y+VE    +  +    PA++TAM++TQII G+ + RT ++D+T+  L+   T++V+ M  + N     I G        ++  + +        + ++S   + +   K  G  SV  ++L  L  I  V+  ++ +++ VYPTP +L  A R    +EA
Sbjct:  744 EEYEILLVLDSREIQMKQNRTYFQDSLAAKGVSCITRSMDLGDVIWI------------------------------------ARPIGSTNQAEELFLDYILERKRLDDLVSSIKDGRFIEQKTRLRRTG--ANKVIYVVENYNREEAERFGMPAIQTAMSSTQIIDGIFLKRTNTIDETVDYLVSA-TKLVKRM--YQNHTLHAIPGHLITRQSYLDLKQAYNKKAGDKEAYLVSYPLFSQLNSKN-GSTSVHEVYLRMLMTIRGVNAERALSLMKVYPTPKSLLMAFRSKPPEEA 998          
The following BLAST results are available for this feature:
BLAST of NO01G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29322.11.500e-9434.40crossover junction endonuclease [Nannochloropsis g... [more]
CBN78791.11.600e-2230.64ERCC4 domain containing protein [Ectocarpus silicu... [more]
GBG23952.13.600e-1929.85Crossover junction endonuclease MUS81 [Aurantiochy... [more]
XP_008608828.17.600e-1729.89hypothetical protein SDRG_04914 [Saprolegnia dicli... [more]
ORY04066.12.200e-1627.66putative DNA repair protein Mus81 [Basidiobolus me... [more]
OAO18109.13.800e-1628.76MUS81, Subunit of structure-specific Mms4p-Mus81p ... [more]
XP_008867324.16.400e-1633.50hypothetical protein H310_04658 [Aphanomyces invad... [more]
OBZ86660.14.200e-1527.04Crossover junction endonuclease MUS81 [Choanephora... [more]
PKY54845.14.200e-1525.61hypothetical protein RhiirA4_502602 [Rhizophagus i... [more]
EPB82577.15.400e-1526.26hypothetical protein HMPREF1544_10661 [Mucor circi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007915NSK007915Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03820.1NO01G03820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577194gene_392Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100136g17gene1312Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03820.1NO01G03820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03820 ID=NO01G03820|Name=NO01G03820|organism=Nannochloropsis oceanica|type=gene|length=2902bp
GTTTCGATCGCAGCTGCGTCTTGGTTTTTGGTCTCCCCCCTCTCCCTATT
CGAGGGTTGCCTTGAATTTTTCTCGATGCTCCCTCTATTGCATGTAGAAT
ACTTGGTGTAAGGCTCAGATTTGCGCGCAAAGACTTGCTTTGGGGCTGGA
GTTGTGCCGACGATGGGCCGGCGATGCCTACGCCTTGCGGCAACCGCAAC
GTTCGTCACTGGCTGGTACAACCTTTTCCTTACTTTATCAGGCAAATAAC
CAAAGACCCGGCAATACGGTTCGACGCACACTATCTGCTTTATTCCTTCA
TGCAGCTTGCTTATCTCTTTCTCTCCCACTGTCCTGCCCCTGGCACGTGC
AGGCCACCAAGCAAGAGAATTGGTGATGGCGCGCAACGACTGCTAGACCC
AGCAACGGCCATCCTCGACGCAATGGCAGGGGACGCAGTGTCCGTCAAGG
CATGGAATGCACGGCTGGTGGCTTACATCAATACCTTGGAAAATGAGGCG
ACTCGGCGAGgtatctatgtcttggcgggggctgtgatcaggtagctcct
ttccaaatgtatacaaacaccccttccgcatgttccgtgctccttacctt
ccagGCTCTCAACTCCGCTACGCGTACAAGAATGTCGCCAAGGCCCTTGC
AAATTTTCCGACACGCATTACCACAGCCAAAGAAGCCCAGCAAATCAAAG
GTGTGGGCCCTACAATCGGCAGGCAACTTGAGAACTTCGTCAACAACAAA
CTTCTGCCCGAGCAGCAACCAATACAACAAGACAAAACAGCAGCAGTAGT
AGCAGCAGCAGTAGCAGCGGCAGCAGAAGAAGATGATGAAACTGATAGTG
ACGGGAAAGGGTGCTCAGAAAAAGAGTTAGGGTCACAGGGCAGTCTTAAC
GAGATGATGGAAGACCTTTTAGTGGCCTCGCAGTTAAGCGCCTCTTTTCC
AGACATGGAGGAGACTCATCCGGCCGAGAACAAGGCCAGCAGCACCTTCA
GTACCACGAGCATCATCAGTACCACCAGTGTCAGCAGCGGCAGCAACAGC
AGCAACGGCAACAGCAACAACAGCACCAGCACTAGTATTGATAGTAGCAG
CAGTGGGAGCAGTACAAGAAGGAGGAGGAGGCTGGATGCGGAACTCTCGC
GTGGGGCTGCGCTCAAGGCTGCTTCTCTCTTGGTGGATGACAAGACAATT
TTCCTGTCGAGCGATGACGATGAGAAAGAGGAAGGGGAAGAAGAGGAGCA
GGAAAGAGAGGACAAGGAGAATATATGGGGCCTCGCAACAAGCACTGTGA
ATGAAACGCCTTCGACATGGCAGCAGCAGCAGCAGCAGCAACAGCAACAG
CAGCAAGGTCTGTCGTCTTCGGTGGTAATGGAGATCATTGACTTGAGCGA
GGACGAGGACAATGACAACGAGCAGGAGGAGTATGAGCAGGAAGGCTATC
AGCGTTCTGGCAGGAATGAATGTGGCGATGGTGACAATAACAATTCAGTG
CTGGTGCTGACGAGCGACAGCGAGGAGGAGGAGGGTGACGTGGAAGCGGA
GGAGGGAGCGAAGGACAGAATCAACGACGATCGCAGCACAACCAGACCCC
CTCCTCCACCATCACTGCCTCTTGTCCCTCCCTCTTCCCCCTCCAGGGGC
AAAGGTCGCAAGCGCAAGCTCCTCTCCCCTCCCAAAGCCTACATACAACT
AGAACTTGGTTTCGGTGGGGGAAAAGTCGCAGCCGCTCTAGCCGATGAGG
GGCAGGAAGAGGAGGAAGAGGAAGAGGAGGACCTGGACGGGCCCATGACG
TTAGCGAGGCTGCATCGCTTGTGTAAGCATTTCGAAGGGAGTCAGGTCGA
GGAATGGGAAGTGGTTCTGTTGCTTGATCGAAGGGAGCATGATAAAAATC
CGAGCATCGAGAGGGGGCTGATCCAGGCGGGGGTAAGGTGCGAGCTTCGT
GTGCTGCAGTTGGGTGATATGATGTGGGTGGTACGGAGACGACAAGTGAG
CAGCGGCAGCAGCAGTAGTAGTAGTGGTGGTAGTAGTAGCAGCAGCAGCG
GCGGCAGTGGTGATGGTGGTGGAACCAGAAGTAAGCAGCAGGAGAAGGCA
AAGAAGAAAATGGAGAACCAGGAGGTGGTTCTCCGGTATATGTGCGAACG
CAAGACCGTTGGAGATCTCGCTGCCAGCATTAAAGATGGGAGGTATAAGG
AACAGAAAGGGCGTATGTTGGGGGTTGGAAAGGAAGTAGATCGGTCTTTT
TATCTGGTGGAGGGGACATTTGAGCAGTTGAATGATATTGTTCGTCCGCC
CGCTTTACGGACGGCCATGGCTACGACGCAGATCATACACGGGCTGCCTG
TGTTGAGGACGCCGAGCTTGGATCAGACGATTTCGTTGTTGCTCCGGATG
CATACTAGGATTGTGCAGGAGATGAAGACATTCTTGAACGTGGCTTGTAG
AGGAATAGGCGGAGGGGGAGGGGAAGAGGGAGGGCGAGTGGAATATATGG
AGAAGCATTTATGTGCCTTGCCGTTGCCGCCTTCGAGGATAATTTCCTTA
GGGGAGTACCAGGAGAGGTGTAAGAAGACGGCAGGGGACTTGAGCGTGCA
AACCATGTTTTTGGTTCAATTATGTGCCATAAATAAGGTTAGTGAGGCGA
AGAGTAAGGCTATCGTGAGTGTTTATCCAACCCCGCATGCATTGGCTAAG
GCGATGAGAGAGATGAGTGAAGACGAGGCGGTTGCGGCGTTGGCCAAGTT
ACCCGTGGCGGGACAAAGGCAGTCGCTGGGGAGGGTGGCGGCTTTGAATA
TATATAAGATGTATCGGTAGTGGGGGATTAGATTGTGGATGGACGAAGAT
GGGTGGTAAAAAGGGGTGGCAGATATGAAGCACGGCAACATAAGTCTTGC
AT
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protein sequence of NO01G03820.1

>NO01G03820.1-protein ID=NO01G03820.1-protein|Name=NO01G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=851bp
MPTPCGNRNVRHWLVQPFPYFIRQITKDPAIRFDAHYLLYSFMQLAYLFL
SHCPAPGTCRPPSKRIGDGAQRLLDPATAILDAMAGDAVSVKAWNARLVA
YINTLENEATRRGSQLRYAYKNVAKALANFPTRITTAKEAQQIKGVGPTI
GRQLENFVNNKLLPEQQPIQQDKTAAVVAAAVAAAAEEDDETDSDGKGCS
EKELGSQGSLNEMMEDLLVASQLSASFPDMEETHPAENKASSTFSTTSII
STTSVSSGSNSSNGNSNNSTSTSIDSSSSGSSTRRRRRLDAELSRGAALK
AASLLVDDKTIFLSSDDDEKEEGEEEEQEREDKENIWGLATSTVNETPST
WQQQQQQQQQQQQGLSSSVVMEIIDLSEDEDNDNEQEEYEQEGYQRSGRN
ECGDGDNNNSVLVLTSDSEEEEGDVEAEEGAKDRINDDRSTTRPPPPPSL
PLVPPSSPSRGKGRKRKLLSPPKAYIQLELGFGGGKVAAALADEGQEEEE
EEEEDLDGPMTLARLHRLCKHFEGSQVEEWEVVLLLDRREHDKNPSIERG
LIQAGVRCELRVLQLGDMMWVVRRRQVSSGSSSSSSGGSSSSSSGGSGDG
GGTRSKQQEKAKKKMENQEVVLRYMCERKTVGDLAASIKDGRYKEQKGRM
LGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPS
LDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCA
LPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIV
SVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMYR
*
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Synonyms
Publications