NO01G03820, NO01G03820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03820 vs. NCBI_GenBank
Match: EWM29322.1 (crossover junction endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 357.1 bits (915), Expect = 1.500e-94 Identity = 269/782 (34.40%), Postives = 324/782 (41.43%), Query Frame = 0 Query: 84 MAGDAVSVKAWNARLVAYINTLENEATRRGSQLRYAYKNVAKALANFPTRITTAKEAQQIKGVGPTIGRQLENFVNNKLLPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGKGCSEKELG-SQGSLNEMMEDLLVASQLSASFPDMEETHPAENKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWGLATSTVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPMTLARLHRLCKHFEGSQVEEWEVVLLLDRREHDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVAC--------------RGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMYR 851 M DA S+K WN RLVAY+ TLE A RRGSQLRY YK+VAKALA PTR+TTA+EA+Q+KGVGPTIGRQLENF+ N L E +D K S E S L+EMMEDLLVASQ S + E +P E+ I G T GP + + L RL + F G++ EEWEVV LLDR EH+ NPSIE L+QAG+ CE+RVL+L D++WV ++LRYM ERKTV DLA+SIKDGRY+EQKGRMLGVG+E+DR+FYLVEG EQLND +RP ALRTA+ +TQ++HG+PVL+T SLDQTI+LL RMHTRI E FL AC G + EY++KH PLP SRII L EYQ C+KT G+LSV+ MF QLCAI+KVSEAKSKA+V+ Y TP LA AM+ ++E+EAVAALA LPV GQRQS+GRVAA NIY +YR Sbjct: 1 MEEDASSIKVWNNRLVAYVKTLELGAARRGSQLRYTYKSVAKALAKHPTRVTTAEEARQLKGVGPTIGRQLENFIVNTLHAE--------------AHAPKSPLPSDRAKADDKAVSVDEASFSVAYLDEMMEDLLVASQTSTCSANTEAQYPLED-----PNREMGTNPDTWSSRVDAPGCQSTDLSDANLLVVSDDESHECEGHGREEEGGKNKENLNVFPGAIERSAPWSSHEARRIHVVDVSDGESDGAIGGTCTG-----------------------------------------------------------------------------LDEGEEGEGGRATGGEGKDVHEVIGTGGERQASGSSSPRVPDGKGRKRKFFSRPEWQGGVEVEGVMGKGCQDVVGGRWWEESKVADVQGPSSRSLLDRLEETFGGTRPEEWEVVALLDRVEHENNPSIEATLLQAGICCEVRVLRLADVLWV-----ARRRAEGRLGGDGGGRAAPGIAVEPGNAGSMREGGHPKEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDAIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRISHEFAHFLQAACGHNRLNSEGDFLPATESFDGVAQSERLSEYLQKHSKTFPLPASRIIPLAEYQHLCRKTVGNLSVRAMFTAQLCAIDKVSEAKSKAVVNAYSTPSRLALAMQSITEEEAVAALAVLPVPGQRQSVGRVAATNIYHVYR 681
BLAST of NO01G03820 vs. NCBI_GenBank
Match: CBN78791.1 (ERCC4 domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 117.9 bits (294), Expect = 1.600e-22 Identity = 91/297 (30.64%), Postives = 133/297 (44.78%), Query Frame = 0 Query: 527 VEEWEVVLLLDRREHDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVA 824 + +WE L++D REH+ S++ L+Q G+RCE R L LGDM+W+ V+L Y+ ERKT DLA+SI DGRY+EQK R+ G + R YLVEG + P ALRTA+ ++Q GL V++ SL T+ L R H I + L +CR G G GG E P ++ GEY + C K AG +V+ + + S A+++AIV + +P L A+ + + +A Sbjct: 253 IGQWEAWLIVDNREHE-FMSVQSSLLQKGIRCETRQLPLGDMLWI--------------------------------------ARRGDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSG--LRRRIYLVEGNLNHQEQLA-PAALRTALVSSQACGGLAVVQCDSLRGTVDFLARTHRHIA----SLLEQSCRR-GAGLWPVGGSRECSGAGAMLRP-----AMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAANGDGLA 497
BLAST of NO01G03820 vs. NCBI_GenBank
Match: GBG23952.1 (Crossover junction endonuclease MUS81 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 106.7 bits (265), Expect = 3.600e-19 Identity = 100/335 (29.85%), Postives = 139/335 (41.49%), Query Frame = 0 Query: 523 EGSQVEEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDL-SVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALA----KAMREMSEDEAVAALAKLPVAGQRQSLGRVAALNIYKMY 850 E + EWE+VLL+D RE DK + L + GV E RVL LGD MW+ VL Y+ ERK V DL SIKDGRY EQK R+ G + R YLVEG I++P ALRTAMA TQ+ G V+ ++ +T+ L RMH R+++ VA G Y H G L SV +F QL I S ++ AI+ YPTP +L + ++ + E+ + + + GQ Q+LG VA+ N++ ++ Sbjct: 293 EADRPHEWELVLLIDMREGSGRDKT-IFQSKLFEHGVNIEKRVLSLGDAMWI------------------------------------VRRKLMDGKTEEYVLDYIIERKEVSDLGTSIKDGRYSEQKYRLQRCG--LSRVIYLVEGE-PSHQSILKPQALRTAMAETQVRDGFTVMHVLNVMETVEYLSRMH-RLIESS----TVATSQNKWSGPARDSWRRYENFH--------------------AANVKGKLRSVNEIFGAQLKQIKGFSGMRAAAILEKYPTPRSLLELFDEGLKNVPEEYKQSFFQNMEIPGQLQNLGPVASTNLFHVF 562
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_008608828.1 (hypothetical protein SDRG_04914 [Saprolegnia diclina VS20] >EQC37895.1 hypothetical protein SDRG_04914 [Saprolegnia diclina VS20]) HSP 1 Score: 99.0 bits (245), Expect = 7.600e-17 Identity = 84/281 (29.89%), Postives = 125/281 (44.48%), Query Frame = 0 Query: 528 EEWEVVLLLDRRE--HDKNPSI-ERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPT 806 +EWEVVLLLD RE NPS+ ER L++AGV CE+R L LGDM+W+ VL + ERK V DLA SI D RY EQK R+ G + YL+EG+ + IV AL TA+ TQ+++ V S D+T++ L +H V+E+ T V R GR ++ L P+ S G + E +K A + + ++ + L + +S +++ + + +PT Sbjct: 274 DEWEVVLLLDHREMVSRSNPSVFERKLLEAGVTCEVRGLHLGDMIWI--------------------------------ARRHRPTFGGRPITEEFVLDVVVERKAVTDLAMSIIDKRYTEQKQRLADTG--LRYVVYLLEGSL-AVETIVSATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRELSTVYKV--RNAAPPAAASVGRPPASLRNF--TQLIPTNWQSFGAFNETFRKKAAPTTGE-LYQMMLMQVPGISAGRARELGAAHPT 514
BLAST of NO01G03820 vs. NCBI_GenBank
Match: ORY04066.1 (putative DNA repair protein Mus81 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 97.4 bits (241), Expect = 2.200e-16 Identity = 91/329 (27.66%), Postives = 150/329 (45.59%), Query Frame = 0 Query: 530 WEVVLLLDRREHDKNPS---IERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGT-FEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKT--FLNVACRGIGGGGGEEGGRVEY--MEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPV-AGQRQSLGRVAALNIYKMY 850 +E+V++LD RE + I++ L + GV R L+LGD++WV + L Y+ ERK + DL ASIKDGR+KEQK R+ G + YLVEG + A++TA+++TQ++ G + +T S+D++I+ L RM TR +Q M T L+V + + Y + +HL L I+ G Y + K +G LS+Q +F+ L ++ K+ I YPTP +L A + +EA + K A +R+++G + +Y+++ Sbjct: 286 FEIVMILDNREVAQKSDRGYIQKELERRGVPVHTRNLELGDVLWV------------------------------------ARQLNCGGSEEEIFLGYVVERKRMDDLVASIKDGRFKEQKFRLKNCG--ASQIVYLVEGNEADGTRAFGGSTAIQTAISSTQVVDGFFLKKTDSVDESINYLSRM-TRQLQSMYTESVLHVIPDSL-------VNKATYLALREHLAGLEPGKEFHITYGSYCQLNSK-SGSLSLQDLFIKMLVTTRGITAEKAYEIAKRYPTPKSLFDAYDSLDSEEAKKHMLKDNARAVRRKNIGAALSERLYRVW 567
BLAST of NO01G03820 vs. NCBI_GenBank
Match: OAO18109.1 (MUS81, Subunit of structure-specific Mms4p-Mus81p endonuclease [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 96.7 bits (239), Expect = 3.800e-16 Identity = 88/306 (28.76%), Postives = 132/306 (43.14%), Query Frame = 0 Query: 525 SQVEEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAK 828 ++ E WEV+LLLD RE ++ L+QAGV C++R L LGDM WV V+L + ERK V DLA SI DGR+ EQ+ R+L G V R YLVEG D++ P +L+TA+ T + G+ V ++ S+D T+ L + + E++ F G+E C L P R ++ +QE+ KT G ++ ++ QL I + + AK+ I YPT L +A + ++ L K Sbjct: 172 AEAEAWEVLLLLDNREVRTKKDRDFLKNQLVQAGVECDVRNLSLGDMQWV---------------------------------------LRRPRDGVEVMLNVLVERKNVRDLAMSIMDGRFNEQQFRLLRCG--VRRVVYLVEGALRS-QDVMPPDSLQTAIMMTVVHRGIYVYQSTSIDDTVVFLKELTDVVKGEVERFF---------ATGDE----------TC---LHPQR-MAYEAFQEQFAKTKGS-KLKHLWCKQLRQIPRCTVAKTLIIAKQYPTMATLLRAYERLGTEKEKEDLLK 411
BLAST of NO01G03820 vs. NCBI_GenBank
Match: XP_008867324.1 (hypothetical protein H310_04658 [Aphanomyces invadans] >ETW04368.1 hypothetical protein H310_04658 [Aphanomyces invadans]) HSP 1 Score: 95.9 bits (237), Expect = 6.400e-16 Identity = 66/197 (33.50%), Postives = 85/197 (43.15%), Query Frame = 0 Query: 530 WEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFL 724 WE+VLLLD RE ER L++A V CE+R L +GDM+W+ VL + ERK V DLA+SI D RY EQK R+ G + YLVEG+FE + +R L+TAM TQ+ H V S D+T+ L +H IV T L Sbjct: 265 WEIVLLLDHREMISRTNRSVFERKLLEANVACEVRSLNIGDMIWI----------------------------------ARSPTRLLNGKPEEYVLEVVVERKNVSDLASSIMDKRYTEQKARLKQTG--LRYVIYLVEGSFESQSTCIRSGGLQTAMTRTQVQHNFLVYHGTSHDETVGFLASLHRHIVHAFHTTL 425
BLAST of NO01G03820 vs. NCBI_GenBank
Match: OBZ86660.1 (Crossover junction endonuclease MUS81 [Choanephora cucurbitarum]) HSP 1 Score: 93.2 bits (230), Expect = 4.200e-15 Identity = 83/307 (27.04%), Postives = 136/307 (44.30%), Query Frame = 0 Query: 528 EEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLL---RMHTRIVQEMKTFL---NVACR----GIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEA 822 +++E+VL++D RE K E+ L GV C R L LGD +W+ + L Y+ ERK + DL +SIKDGR+ EQK R+ G E + Y+VE + + A++TAM++TQII G+ + RT S+D TI L+ R+ RI + + ++ ++ R G+ G G + Y +I+ Y + K G S+ ++L L I V+ ++ +++ +YPTP +L +A R +S D+A Sbjct: 696 DQYEIVLVIDSREIQMKGKRDYFEQTLTAKGVSCITRSLDLGDAIWI--------------------------------------ARSKSNPPQELFLDYIVERKRLDDLVSSIKDGRFTEQKLRLKRSGAE--KLIYVVEEYNREEAERFGAQAIQTAMSSTQIIDGIFLKRTSSIDDTIDYLVSITRLIERIYRNTRLYIIPSHLITRQNYLGLKGACPRRQGEIAY--------------VITYTLYNQLNAKN-GSASLHEVYLRMLMTIRGVNAERALSLMKIYPTPRSLLEAFRGLSPDKA 947
BLAST of NO01G03820 vs. NCBI_GenBank
Match: PKY54845.1 (hypothetical protein RhiirA4_502602 [Rhizophagus irregularis]) HSP 1 Score: 93.2 bits (230), Expect = 4.200e-15 Identity = 84/328 (25.61%), Postives = 151/328 (46.04%), Query Frame = 0 Query: 530 WEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVR--PPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEAVAALAKLPVAG---QRQSLGRVAALNIYKMY 850 +EV+L+LD RE I+ L Q G++ +R L+LGD++WV +VL Y+ ERK + DL +SIKDGR++EQK R+ G + + YL+E L ++ A+++AM +TQ+++G + RT ++DQ+I L+RM + K + N I G ++ ++++L + + +S Y + K+ L+++ F+ L I +S K+ IV +YPTPH L A + +E + + V G +R+++G + +Y+++ Sbjct: 317 FEVILILDNREVKLKKDRDYIQDTLQQKGLKISVRNLELGDVIWV-------------------------------------ARKYNSFTQEEIVLDYIIERKRMDDLVSSIKDGRFREQKFRLSRSG--IGQIIYLIED--YNLKEVAEFGIDAIKSAMTSTQVLNGFFLKRTGAIDQSIDYLVRMTNML---KKLYENKTIYSIPDGAIYRANFLD-LKQNLATIYTSRTFHVSFASYSDLNSKSK-SLTLKDTFIKFLMTIRGLSAEKAAEIVKIYPTPHHLFDAFDFLDNEEEKKKML-MNVGGNMIRRKNIGSALSEKVYQIW 597
BLAST of NO01G03820 vs. NCBI_GenBank
Match: EPB82577.1 (hypothetical protein HMPREF1544_10661 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 92.8 bits (229), Expect = 5.400e-15 Identity = 78/297 (26.26%), Postives = 132/297 (44.44%), Query Frame = 0 Query: 528 EEWEVVLLLDRRE---HDKNPSIERGLIQAGVRCELRVLQLGDMMWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLRYMCERKTVGDLAASIKDGRYKEQKGRMLGVGKEVDRSFYLVEGTFEQLNDIVRPPALRTAMATTQIIHGLPVLRTPSLDQTISLLLRMHTRIVQEMKTFLNVACRGIGGGGGEEGGRVEYMEKHLCALPLPPSRIISLGEYQERCKKTAGDLSVQTMFLVQLCAINKVSEAKSKAIVSVYPTPHALAKAMREMSEDEA 822 EE+E++L+LD RE + L GV C R + LGD++W+ + L Y+ ERK + DL +SIKDGR+ EQK R+ G ++ Y+VE + + PA++TAM++TQII G+ + RT ++D+T+ L+ T++V+ M + N I G ++ + + + ++S + + K G SV ++L L I V+ ++ +++ VYPTP +L A R +EA Sbjct: 744 EEYEILLVLDSREIQMKQNRTYFQDSLAAKGVSCITRSMDLGDVIWI------------------------------------ARPIGSTNQAEELFLDYILERKRLDDLVSSIKDGRFIEQKTRLRRTG--ANKVIYVVENYNREEAERFGMPAIQTAMSSTQIIDGIFLKRTNTIDETVDYLVSA-TKLVKRM--YQNHTLHAIPGHLITRQSYLDLKQAYNKKAGDKEAYLVSYPLFSQLNSKN-GSTSVHEVYLRMLMTIRGVNAERALSLMKVYPTPKSLLMAFRSKPPEEA 998 The following BLAST results are available for this feature:
BLAST of NO01G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03820 ID=NO01G03820|Name=NO01G03820|organism=Nannochloropsis oceanica|type=gene|length=2902bpback to top protein sequence of NO01G03820.1 >NO01G03820.1-protein ID=NO01G03820.1-protein|Name=NO01G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=851bpback to top Synonyms
Publications
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