NO01G03750, NO01G03750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03750 vs. NCBI_GenBank
Match: EWM29303.1 (emp24 gp25l p24 family protein [Nannochloropsis gaditana]) HSP 1 Score: 303.5 bits (776), Expect = 5.300e-79 Identity = 154/209 (73.68%), Postives = 172/209 (82.30%), Query Frame = 0 Query: 15 LCLILVLLLLLQGYGGAQFYIVVXXXXXXXXXXXXXXQGTLVTVEYENPAYATQNLNLVISLRSGPGTTGSNSKMIQQLQMDEEKGHIKFATVKDGFHSLCIVPSKVTKPTKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 L + L++LLL + A+FY+V+ QGT VTV+Y+ PAYATQ+LNLVISL SGPG G KM+QQ+QM+EEKG KFATVKDGFHSLCIVP VTKPTK+GL+VTYGK A+Y+DLAKEAHIDLLEASIM LNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQV ILLVTGVLQVNNLKQFFKAR+LV Sbjct: 43 LRIFLMMLLLSRNACKAEFYVVIQPSGNEQCFMIEQPQGTPVTVDYDLPAYATQSLNLVISLVSGPGGKGGGGKMVQQVQMNEEKGQFKFATVKDGFHSLCIVPHTVTKPTKVGLEVTYGKSDAYYADLAKEAHIDLLEASIMHLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVGILLVTGVLQVNNLKQFFKARRLV 251
BLAST of NO01G03750 vs. NCBI_GenBank
Match: XP_005854785.1 (emp24 gp25l p24 family protein [Nannochloropsis gaditana CCMP526] >XP_005854822.1 emp24 gp25l p24 family protein [Nannochloropsis gaditana CCMP526] >EKU21534.1 emp24 gp25l p24 family protein [Nannochloropsis gaditana CCMP526] >EKU21574.1 emp24 gp25l p24 family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 302.4 bits (773), Expect = 1.200e-78 Identity = 152/204 (74.51%), Postives = 169/204 (82.84%), Query Frame = 0 Query: 20 VLLLLLQGYGGAQFYIVVXXXXXXXXXXXXXXQGTLVTVEYENPAYATQNLNLVISLRSGPGTTGSNSKMIQQLQMDEEKGHIKFATVKDGFHSLCIVPSKVTKPTKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 ++LLL + A+FY+V+ QGT VTV+Y+ PAYATQ+LNLVISL SGPG G KM+QQ+QM+EEKG KFATVKDGFHSLCIVP VTKPTK+GL+VTYGK A+Y+DLAKEAHIDLLEASIM LNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQV ILLVTGVLQVNNLKQFFKAR+LV Sbjct: 1 MMLLLSRNACKAEFYVVIQPSGNEQCFMIEQPQGTPVTVDYDLPAYATQSLNLVISLVSGPGGKGGGGKMVQQVQMNEEKGQFKFATVKDGFHSLCIVPHTVTKPTKVGLEVTYGKSDAYYADLAKEAHIDLLEASIMHLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVGILLVTGVLQVNNLKQFFKARRLV 204
BLAST of NO01G03750 vs. NCBI_GenBank
Match: XP_009041616.1 (hypothetical protein AURANDRAFT_15190, partial [Aureococcus anophagefferens] >EGB03687.1 hypothetical protein AURANDRAFT_15190, partial [Aureococcus anophagefferens]) HSP 1 Score: 124.4 bits (311), Expect = 4.400e-25 Identity = 60/135 (44.44%), Postives = 89/135 (65.93%), Query Frame = 0 Query: 85 SNSKMIQQLQMDEEKGHIKFATVKDGFHSLCIVP--SKVTKPTKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFF 218 +NS + ++ + KG ATV + H LC+ P +K+ + L+V G +YS++A E H+D L+ +++LN ++ +ILNEADYMK+KEV FH++ ER N AA WWPILQ+AIL++T QV+NLK FF Sbjct: 16 TNSVVFSKI-VSSHKGEESMATVSEANHDLCVKPVTNKLEAEFRFELEVERGHGDKYYSEMASENHMDRLQVEVVKLNDELAEILNEADYMKEKEVKFHKKAERINLAAIWWPILQIAILVLTATFQVHNLKGFF 149
BLAST of NO01G03750 vs. NCBI_GenBank
Match: XP_004355795.1 (emp24/gp25L/p24 family protein [Cavenderia fasciculata] >EGG17311.1 emp24/gp25L/p24 family protein [Cavenderia fasciculata]) HSP 1 Score: 101.7 bits (252), Expect = 3.100e-18 Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 0 Query: 100 GHIKFATVKDGFHSLCIV--PSKVTKP---TKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 G F T G + +C+ PSK P T++ LD+ G Y ++AK H++ LE S+ RLN ++ QI E Y K +EV+F E TNS WW +LQ+ IL++TG+ Q+ +LK FFKA+KLV Sbjct: 79 GRFAFQTAMGGEYKICVSTNPSKWFGPQVKTRLHLDIQVGANANDYEEIAKVEHLNNLEISVKRLNDRVTQIRKEQSYQKGREVVFRNTSESTNSRVMWWSVLQLIILVLTGMWQMRHLKSFFKAKKLV 207
BLAST of NO01G03750 vs. NCBI_GenBank
Match: XP_020431828.1 (emp24/gp25L/p24 family protein [Heterostelium album PN500] >EFA79707.1 emp24/gp25L/p24 family protein [Heterostelium album PN500]) HSP 1 Score: 95.1 bits (235), Expect = 2.900e-16 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 100 GHIKFATVKDGFHSLCIVPSK-----VTKPTKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 G F T+ G + +CI + T T++ LD+ G Y ++AK ++ LE S+ RLN ++ Q+ E Y K +E+ F E TNS WW ILQV +L +TG+ Q+ +LK FFKA+KLV Sbjct: 88 GRFAFQTLIGGEYKICISTNSSKWFGPTIKTRLHLDIQVGANANDYEEIAKVEQLNNLEISVKRLNDRVTQVRKEQSYQKAREITFRNTSESTNSRVMWWAILQVVVLCLTGMWQMRHLKSFFKAKKLV 216
BLAST of NO01G03750 vs. NCBI_GenBank
Match: XP_641887.1 (hypothetical protein DDB_G0278969 [Dictyostelium discoideum AX4] >BAD05162.1 emp24/gp25L/p24 family protein [Dictyostelium discoideum] >EAL67906.1 hypothetical protein DDB_G0278969 [Dictyostelium discoideum AX4]) HSP 1 Score: 94.7 bits (234), Expect = 3.800e-16 Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 100 GHIKFATVKDGFHSLCIV--PSKVTKP---TKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 G F+T G H +C SK P T++ L++ G Y ++AK H+ +E S+ RLN ++ QI E Y K +E++F E TN+ WW I+Q+ +L++TGV Q+ +LK FFKA+KLV Sbjct: 86 GRFAFSTQVGGEHKICFSTNTSKWFGPSVKTRLHLEIEGGAGANDYEEIAKVEHLTGIEISLRRLNDRVNQIRKEQSYQKGREIVFRNTSESTNARVMWWSIIQLVVLVLTGVWQMKHLKSFFKAKKLV 214
BLAST of NO01G03750 vs. NCBI_GenBank
Match: KYR03165.1 (emp24/gp25L/p24 family protein [Tieghemostelium lacteum]) HSP 1 Score: 93.6 bits (231), Expect = 8.400e-16 Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 100 GHIKFATVKDGFHSLCIVPSK-----VTKPTKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 G F T G H +C + + T++ LD+ G Y D+AK ++ +E SI RLN ++ QI E Y + +E F E TNS WW +LQV +L+ TGV Q+ +LK FFKA+KLV Sbjct: 86 GRFSFTTQIGGEHKICFSTNTSRWFGPSVKTRLHLDLETGAGANDYEDIAKVEQLNSMEISIRRLNDRVNQIRKEQSYQRGREQTFRNTSESTNSRVMWWSLLQVVVLVATGVWQMRHLKSFFKAKKLV 214
BLAST of NO01G03750 vs. NCBI_GenBank
Match: XP_012748052.1 (hypothetical protein SAMD00019534_122220, partial [Acytostelium subglobosum LB1] >GAM29046.1 hypothetical protein SAMD00019534_122220, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 91.3 bits (225), Expect = 4.200e-15 Identity = 46/129 (35.66%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 100 GHIKFATVKDGFHSLCIV--PSKVTKP---TKIGLDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 G F T+ G + +C+ SK P T++ D+ G Y ++AK H++ LE ++ RLN ++ QI E Y K +E+ F E TN+ WW +LQ+ +L++TG+ Q+ +LK FF+A+KLV Sbjct: 87 GRFAFQTLMGGEYKVCVSTNSSKWFGPSIKTRLHFDILVGANANDYEEIAKADHLNQLEIALKRLNDRVTQIRKEQSYQKAREMTFRNTSESTNNRVTWWAVLQLVVLVLTGLWQMRHLKSFFRAKKLV 215
BLAST of NO01G03750 vs. NCBI_GenBank
Match: GAX94925.1 (CMGC/CDK/CRK7 protein kinase, variant [Pythium insidiosum]) HSP 1 Score: 90.5 bits (223), Expect = 7.100e-15 Identity = 51/171 (29.82%), Postives = 93/171 (54.39%), Query Frame = 0 Query: 59 EYENPAYATQNLNLVISLRSGPGTTGSNSKMIQQLQMDEEKGHIKFATVKDGFHSLCI----VPSKVTKPTKIG--LDVTYGKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFKARKLV 224 EYE+P + L V+++ + G +K++++ ++ KG + + + ++G H +C+ + + TK+ L + G K Y DLA++ H+D L+ +++L ++ I DY+K K L + E NS A W I+Q+ +LL+T QV +L+QFF +KLV Sbjct: 383 EYESPD-TSDTLRTVVAVYAPSGDPAKPNKLMKK-EVTTSKGAVPYTSTQNGEHWVCVSLDSAEYAMPQGTKMRFVLRIAMGPSKKEYQDLARKGHMDDLQLEVLKLRDRVSAIQRNQDYIKTKRQLLQTRIESNNSKAMWVSIVQIGMLLITAFFQVQHLRQFFHKKKLV 551
BLAST of NO01G03750 vs. NCBI_GenBank
Match: EJK75352.1 (hypothetical protein THAOC_02924 [Thalassiosira oceanica]) HSP 1 Score: 84.3 bits (207), Expect = 5.100e-13 Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 84 GSNSKMIQQLQMDEEKGHIKFATVKDGFHSLCI--VPSKVTKPTKIGLDVTY---------------GKPKAFYSDLAKEAHIDLLEASIMRLNAQMGQILNEADYMKDKEVLFHQQCERTNSAARWWPILQVAILLVTGVLQVNNLKQFFK 219 G+N + Q ++++KG I++ T DG S+C+ + + PT I L VT G S + H +E ++ L ++ IL +ADY K+ EV FH+Q N A++WWPI+Q+ +LL+TG Q N++ FF+ Sbjct: 99 GANQAKVVQ-DLNQKKGSIEYVTQVDGKVSICVQSLTASAVSPTPISLRVTESPAGEDSLEAGLKTDGAKLDSQSQRNAKEHFSQMEKTLSSLISKTDMILRQADYAKELEVEFHEQSIAMNKASQWWPIVQLCVLLITGFTQANHMVAFFR 249 The following BLAST results are available for this feature:
BLAST of NO01G03750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03750 ID=NO01G03750|Name=NO01G03750|organism=Nannochloropsis oceanica|type=gene|length=913bpback to top protein sequence of NO01G03750.1 >NO01G03750.1-protein ID=NO01G03750.1-protein|Name=NO01G03750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
|