NO01G03740, NO01G03740 (gene) Nannochloropsis oceanica

Overview
NameNO01G03740
Unique NameNO01G03740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4871
Alignment locationchr1:998435..1003305 +

Link to JBrowse

Properties
Property NameValue
DescriptionRing finger protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:998435..1003305 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035914Sperma_CUB_dom_sf
IPR001841Znf_RING
Homology
BLAST of NO01G03740 vs. NCBI_GenBank
Match: EWM29312.1 (ring finger protein [Nannochloropsis gaditana])

HSP 1 Score: 405.2 bits (1040), Expect = 3.900e-109
Identity = 247/405 (60.99%), Postives = 297/405 (73.33%), Query Frame = 0
Query:  122 ENRACEDLSDCRSCFRTPGCGFCGGTGQCMPEAHASTCGKGWSNAGVCYTTCPVESVPFHDAAGVIQLGAQAPRPVKYIPGDACTYTIWPLLDTGTTGGNGPTGGNRRTLMIRLQFEYMDLGPGDSLSIFSNGLDGPKILSIGGNGEGVVNRIITSRSSSVVLRLNANGHEGGTGFRVYWRVIENSPLDIYLISAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGRFGLSFGVGARAAGAAGATGRGMARALSAQEKARLPIAPYDPGPGAGXXXXXXXXXXXXXXXXPSSIFQCDMRECCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGGSGGGMGP----RALIDLLRQRM------LVHVRRNPP 517
            ++  C+ +SDC SCF+  GCG+CGGTG+C+ +A A  C KGWS+ G+CYT+CP ++ P H+AAGVIQ GA AP  V YIPG++CT+TIWPL  +G+    G   GNRR++MIRLQFEY+DLGPGD+L+I+SNGLDGPKILSI G+G G+VNR ITSRSSSV+LRL+A G  GGTGFRVYWRVIE+SPLDIYLISAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ++G GA A+  A       ARALS QEKARLPIAPYDPG                     S+++  + RECCICL+DFERTDLVRKLPCGH++HSECVD WFS NSVCPLCK++V DKL       GV G  G GM P    RA + L+++R+      L+H+ R PP
Sbjct:   54 QDAVCDAISDCTSCFQEAGCGYCGGTGRCLAQASADKCSKGWSDTGICYTSCPADAAPLHEAAGVIQFGAMAPEAVHYIPGESCTFTIWPLPGSGSATSPGAGAGNRRSVMIRLQFEYLDLGPGDTLNIYSNGLDGPKILSIAGSGLGIVNRTITSRSSSVILRLHAEGPVGGTGFRVYWRVIESSPLDIYLISAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLW-----AWG-GANASAPA-------ARALSPQEKARLPIAPYDPG--------------------ESNLY--NFRECCICLTDFERTDLVRKLPCGHVYHSECVDCWFSVNSVCPLCKSDVRDKL-------GV-GAEGAGMVPFWRMRAALHLIQRRLLWPAGHLLHLHRPPP 415          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_005854788.1 (atp synthetase alpha chain -like protein [Nannochloropsis gaditana CCMP526] >XP_005854824.1 atp synthetase alpha chain -like protein [Nannochloropsis gaditana CCMP526] >EKU21536.1 atp synthetase alpha chain -like protein [Nannochloropsis gaditana CCMP526] >EKU21577.1 atp synthetase alpha chain -like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 288.5 bits (737), Expect = 5.300e-74
Identity = 177/381 (46.46%), Postives = 210/381 (55.12%), Query Frame = 0
Query:  193 APRPVKYIPGDACTYTIWPLLDTGTTGGNGPTGGNRRTLMIRLQFEYMDLGPGDSLSIFSNGLDGPKILSIGGNGEGVVNRIITSRSSSVVLRLNANGHEGGTGFRVYWRVIENSPLDIYLISAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGRFGLSFGVGAR-----------------------------------------------AAGAAGATGRGMARALSAQEKARLPIAPYDPGPGAGXXXXXXXXXXXXXXXXPSSIFQCDMRECCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGGSGGGMGP----RALIDLLRQRM------LVHVRRNPP 517
            AP  V YIPG++CT+TIWPL  +G+    G   GNRR++MIRLQFEY+DLGPGD+L+I+SNGLDGPKILSI G+G G+VNR ITSRSSSVVLRL+A G  GGTGFRVYWRVIE+SPLDIYLISAI                                     R   S  +                                                  A G A A+    ARALS QEKARLPIAPYDPG                     S+++  + RECCICL+DFERTDLVRKLPCGH++HSECVD WFS NSVCPLCK++V DKL       GV G  G GM P    RA + L+++R+      L+H+ R PP
Sbjct:    2 APGAVHYIPGESCTFTIWPLPGSGSATSPGAGAGNRRSVMIRLQFEYLDLGPGDTLNIYSNGLDGPKILSIAGSGLGIVNRTITSRSSSVVLRLHAEGPVGGTGFRVYWRVIESSPLDIYLISAIIAKVLNGDLSGVDAPDDHGSRSMIGAMESLGRQDMAKRSSDSTPISTHEHIPTYANATYPVTSILTCILXXXXXXXXXXXXXXXXXXXXXXRLLWAWGGANASAPA-ARALSPQEKARLPIAPYDPG--------------------ESNLY--NFRECCICLTDFERTDLVRKLPCGHVYHSECVDCWFSVNSVCPLCKSDVRDKL-------GV-GAEGAGMVPFWRMRAALHLIQRRLLWPAGHLLHLHRPPP 351          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_019447524.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Lupinus angustifolius] >XP_019447525.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Lupinus angustifolius] >XP_019447526.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Lupinus angustifolius] >XP_019447527.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Lupinus angustifolius] >OIW09269.1 hypothetical protein TanjilG_01240 [Lupinus angustifolius])

HSP 1 Score: 79.3 bits (194), Expect = 4.800e-11
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEG 486
            CCICL+ +E  D +R+LPC HLFH EC+D W   N++CPLCK+ V++ + +    EG
Sbjct:  342 CCICLAKYENNDELRELPCSHLFHKECIDKWLKINALCPLCKSEVVENVRRSISREG 398          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_015971963.1 (E3 ubiquitin-protein ligase At1g63170 isoform X1 [Arachis duranensis])

HSP 1 Score: 79.0 bits (193), Expect = 6.300e-11
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEG 486
            CCICL+ +E  D +R+LPC HLFH ECVD W   N++CPLCK+ V + L      EG
Sbjct:  377 CCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGENLTGSGAAEG 433          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_020981012.1 (E3 ubiquitin-protein ligase At1g12760 isoform X2 [Arachis duranensis])

HSP 1 Score: 79.0 bits (193), Expect = 6.300e-11
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEG 486
            CCICL+ +E  D +R+LPC HLFH ECVD W   N++CPLCK+ V + L      EG
Sbjct:  335 CCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGENLTGSGAAEG 391          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_010533709.1 (PREDICTED: E3 ubiquitin-protein ligase At1g12760 [Tarenaya hassleriana])

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-10
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  428 ECCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLN 479
            ECCICLS +E  D +R+LPCGH FH  CVD W   NS CPLCK N+L   N
Sbjct:  344 ECCICLSAYEDGDELRELPCGHHFHCACVDKWLFINSTCPLCKFNILKSSN 394          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: OIW03071.1 (hypothetical protein TanjilG_19351 [Lupinus angustifolius])

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-10
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQ 480
            CCICL+ +E  D +R+LPC HLFH ECVD W   N++CPLCK+ V +K  +
Sbjct:  389 CCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGEKFRR 439          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_019457797.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Lupinus angustifolius] >XP_019457798.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Lupinus angustifolius] >XP_019457799.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Lupinus angustifolius] >XP_019457800.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Lupinus angustifolius] >XP_019457801.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Lupinus angustifolius] >XP_019457802.1 PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Lupinus angustifolius])

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-10
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQ 480
            CCICL+ +E  D +R+LPC HLFH ECVD W   N++CPLCK+ V +K  +
Sbjct:  343 CCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGEKFRR 393          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_013461907.1 (E3 ubiquitin-protein ligase At1g12760 [Medicago truncatula] >KEH35942.1 zinc finger, C3HC4 type (RING finger) protein, putative [Medicago truncatula])

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-10
Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGGSG 492
            CCIC++++E  D +R+LPC HLFH ECVD W   N++CPLCK+ + + + +  + E  +   G
Sbjct:  317 CCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEIGENVTEPVIEENANQQRG 379          
BLAST of NO01G03740 vs. NCBI_GenBank
Match: XP_016162370.1 (E3 ubiquitin-protein ligase At1g63170 isoform X1 [Arachis ipaensis] >XP_020960803.1 E3 ubiquitin-protein ligase At1g63170 isoform X1 [Arachis ipaensis])

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-10
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0
Query:  429 CCICLSDFERTDLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEG 486
            CCICL+ +E  D +R+LPC HLFH +CVD W   N++CPLCK+ V + L      EG
Sbjct:  377 CCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGENLTGSGAAEG 433          
The following BLAST results are available for this feature:
BLAST of NO01G03740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29312.13.900e-10960.99ring finger protein [Nannochloropsis gaditana][more]
XP_005854788.15.300e-7446.46atp synthetase alpha chain -like protein [Nannochl... [more]
XP_019447524.14.800e-1149.12PREDICTED: E3 ubiquitin-protein ligase At1g63170 [... [more]
XP_015971963.16.300e-1152.63E3 ubiquitin-protein ligase At1g63170 isoform X1 [... [more]
XP_020981012.16.300e-1152.63E3 ubiquitin-protein ligase At1g12760 isoform X2 [... [more]
XP_010533709.11.100e-1060.78PREDICTED: E3 ubiquitin-protein ligase At1g12760 [... [more]
OIW03071.11.100e-1054.90hypothetical protein TanjilG_19351 [Lupinus angust... [more]
XP_019457797.11.100e-1054.90PREDICTED: E3 ubiquitin-protein ligase At1g63170-l... [more]
XP_013461907.11.400e-1042.86E3 ubiquitin-protein ligase At1g12760 [Medicago tr... [more]
XP_016162370.11.400e-1050.88E3 ubiquitin-protein ligase At1g63170 isoform X1 [... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007926NSK007926Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03740.1NO01G03740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G03740.2NO01G03740.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577164gene_384Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100152g8gene1323Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03740.1NO01G03740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G03740.2NO01G03740.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03740 ID=NO01G03740|Name=NO01G03740|organism=Nannochloropsis oceanica|type=gene|length=4871bp
TTCCCCCTGCTCTGTGTCTATTGTTACTTCATTATTTCACGCTTCGAACA
ACGCGTTGCGAACAAATCGGAGTCTTTTTTTGAATCCCCCCCCCACTCCT
CCCTCCTCTTTTAATTTATCAACCGCCGTCTTCTTCCCCGCCGTCGTCGC
TCTTCGTCTTCGTCCTCCTTCACTCGCAACAACCCCTCCTCTTCCTCCTC
CTCTTCCCACCCCCTTCTCACCCTCCCTCCCCTCTTCATACTCCCCTCCC
AAATACTCGCAAACATGTCCTCGTCTCCACGACTGTACCCATCACTCCCG
CCTTCGAAAATTTTATCCAATCCCTCTAGCTCGTCTTCCTCTTCCAAAAA
GTCCATCGACATCGCCTCCTCCTCCTCTTCCTCCTCCCCCTCCTCCCCCA
TGCCCAACTTCAACCCCAAACCCTCCTTCCGCCGCCTCTTCCTATTCTCC
TCCTCCTTTTTCAGCTTGTTTCCCAAAAAAGCCTTAAAGGGAACCTTATC
TATGTAGGGATACTCTCCCACCCACGCCCCCGCGGCCGGCACAAACAAAT
CCGACACCCCCAGCAATTCCTCAAACTCCGGCGTCTCACTCAACACCAAA
CCCTCGCATCGCATCCCCGGCCTCACCCTCTTATAACTAGGCAACACAGG
AGCATACACCCTCAATTTACGCCCTTCTTCGTCCTCCACACACATGACCA
TTGCCTCCGGTCTATTATATTCCTCTGCCTGGGTTATCCTGCCTACCCTC
ACCACCTTCCCACTAAACAGCGCCCCGAACACTCCCTCATCCCGCGGATG
CCGTGCAAAATAACCCCCCCTAAAACTTAGATTCCGGCGATATGCTGCCA
GGCCCGGCGCCAGGATCCAATAAAACAAAAATACCGTTCCCAAAATCGTG
GCTGCTGGTAGCCCTATCAGGAAGGTCAAGAACCAGCTGATCCACAACCC
GAAGAAGGTGGACGAGGCCGCTTCATAAATCTTTCCGAATTTATCGCTTT
CCGTGATACCCCAGTAGTACTTCCATTGGTCGCCCGTGAATTGTGAGGGG
AGGAGACGACGGAGGGTGCGGTCCCGGAGGACGGTCAACCCGCAAGTGAT
GGCGCCACATGTACGACCGTGGAAATGGCGATTGCGCAGGTGGAGGGTGG
CGCTGTGCCCGTTGCACGGGAGGGAGGGGGCAAGTCCAAAGGCGAGAGGA
GAGCTGGTGGCTCGGCGATGACGGGGAGAGAAAAAGTGAGCGGGAGAAGA
GGAAGAGTATGGAGATGGCGGGTTGTGAAACGGGAGTTGTTGCTGCGGGA
GGGGCTGGGGGGTGAAAAAGGATAGGGAAAGGGAAAGAGATGGTGAGTGT
GAGCTGTGGGCTAAAAAGGAAAGGGGTGGACATAAGAATGAGATACCAGA
TTCATCAAGATGGGGTCTGCCGAACTGATTCCTCAGGACGACCAGGGCAT
GATGGAGTGAGGCGGGAGGACAGGCAAGATCACAGCCACAAGCGACCACA
GCAAACAGGAAACCTGCAAAGGGTTGCTGCATCAAAGTGAGGCTAATTTG
GACTTACCATGAGGCTACTGCTGCAGCAAGGAGTCGCAAGCGGCATAATG
GATGATGATAATGCTGAGGGCGGCATCATTACTTTGACTAGAACAGGCCT
TGTAGACCCCGCCGGAGATGACTACCACTTGTGCCCTGCGACGGTTGTCC
GTGTTCTCTTTTAATTGTCTTAGTTGGCGTAAGTGTAGATTTATGCGTAG
GTTAGGGGTCAAAAGTATTGCTCTACTTGTTTTTTTAAAGTTCAAGAAAG
CTCAAGCTCATCGGGGTCAAGATGACGTACAAAGCACTCGCCCATCTTCT
ACTTTTACCCTCAAGATAACATATCCTACAAATCCTGCAGGCCAAGGCAT
AAGGGACACTAGATTGAACCTGTTTGCTGTGTGCTTTTGTTGAGACCCTC
TTAGGCCTGTGCCTCCCATCCAGCCACCGCGGCTGCTCCCTAACAGAACA
ACTGGAGCCTGAAAAATAGAACTGATAATGTACACATGCCAACACCTCAT
CAATGCATGACCACCTCATCATTATTGTCGCGTGTTCCTGTAAAACAGTG
CCGCAAAGGCTGTCTGCATTCTCGATTGTTGCACGAAGGCAAAGAGCATG
CGCAGATAACTTGTGAGGAGGTCAATTTCCGTGCATGTGCTCGCCTTGAT
TACACCGCACATGCGCGCTCTTCGAATGGATTTTGCGTGCCATACCGCTG
TGCGCATAGCGGCCTATCATCTTGGCGGTCAGTGTGGCGCGGGGCGATGA
CCTTGTGGCTTTCATCTGATGCCCGGTCACGTACCCCATTCGAGCCGCCT
ACTTTCAACCCTCATCCCACCACAGACACCCACTCCCACACACTCCTCCA
CCCCGACAGGCCATGGTATTAACACCAAGGTATTAAAACTAACAATAGGG
CAAGCACACCTGCACCCGCACCCATTACCACCGCAAGGGGCCATGGTCTT
GATATCAAGGAGAAAAGGGCGCAGCGAAGGCTCCCTCCCGTTGCTGCTGC
TGGTGCTGTTGCTCATAGTGCACAACCTCGGTCAAGTCCTAGGATCGGCG
GTGGTCACCACCAGTGCCACTCTCACCACCACCTTCCCTGATCACATCGA
CCTGGCCTATGACATTGATCAACGCCTTCTCGAAAACCGTGCTTGCGAAG
ATCTGAGTGACTGCAGAAGCTGCTTTCGGACACCCGGCTGTGGATTCTGC
GGTGGCACCGGACAATGCATGCCTGAAGCCCATGCAAGCACCTGTGGAAA
AGGGTGGAGCAACGCTGGGGTGTGCTATACGACCTGCCCAGTGGAATCTG
TCCCTTTTCACGACGCTGCTGGTGTGATTCAGCTGGGTGCCCAAGCGCCA
CGGCCGGTTAAGTACATTCCGGGGGATGCGTGCACGTATACAATTTGGCC
ATTACTGGACACTGGGACAACAGGCGGTAATGGTCCCACGGGGGGGAATC
GACGAACGTTGATGATTCGTTTGCAgtaagtttgaagccataagggtttg
ggcacagggtgaagagggacgaagagagacatgcctcaagctttcttctt
ctttcattcttttcaatagGTTCGAGTACATGGATCTGGGGCCTGGTGAT
AGCCTCAGCATATTTTCCAATGGGCTCGACGGACCGAAGATCCTGTCGAT
TGGCGGGAATGGGGAGGGGGTTGTGAATAGGATTATAACGAGTCGCTCGA
GCTCAGTGGTGCTGCGGCTGAACGCGAATGGCCATGAAGGAGGGACTGGC
TTTCGGGTTTATTGGCGGGTAATTGAAAATTCGCCCTTGGACATTTATTT
GATCTCTGCGATCATAGgtgagctgggttgcaggggtggatgggagggtg
ggagggagggagggtgagagggagggagggagggagtgtgagaaggaagg
agggaggctttgcattggttctttctttttctacgtcgtggaatcacgct
ctcagattcgtaccctcccttcctttctctcattttctttccagTTACCT
CCATCCTAACCTGCATCCTCTGCTCGTGCTGTTGCAACAACTGCGTGGCG
ATGATGGTGGGGCAGCACCACGACGATGGCGTTGGGGGAGGGGGCATGGG
CCGCTTCGGATTGTCTTTTGGAGTAGGCGCTCGTGCTGCTGGTGCTGCTG
GTGCAACAGGTCGTGGGATGGCACGCGCCCTCTCCGCGCAGGAAAAAGCA
CGCTTGCCCATAGCGCCATATGACCCGGGGCCGGGGGCCGGGGGGGAGGA
AGGGAAGGAGGGTGGGAAGGAGGGAGGGCTTGAGAATGGACCGTCCTCGA
TTTTTCAGTGTGACATGAGGGAGTGTTGCATTTGTCTGAGTGACTTCGAG
AGGACGGATTTGGTGAGAAAATTGCCATGTGGGCATCTGTTTCATTCAGA
Ggtaggcatggagaaaggagggagggagggagagaagggatttggcactt
attatgactcactctctcactcaatctttgcttctcaccttccttctcta
cctccctacctccttcccaataatgtagtaattcacggcttccatcaacg
cttgtcttctctgaagaccaacgtcgctcacttcctccccccccacctcc
ttccctcccttcctcccgcccttcctcccgcccttcctcccaaccacagT
GCGTGGATAGCTGGTTCTCTTTCAACTCTGTCTGCCCCTTATGCAAAGCC
AACGTTCTCGACAAGCTCAATCAATATCCTCTTCCAGAAGGGGTGGATGG
AGGGAGTGGAGGAGGAATGGGTCCGCGGGCGCTTATCGACCTCCTCCGTC
AGCGCATGCTAGTGCACGTTCGGCGTAACCCCCCTCGTGCTCGGACTTAT
CCAGCTGCTGCCGCTGCTGCTCCTGCTGCTCCTGTGCTTGCTGCTGGAGG
AGGGGTAGGAGGAGAGAGGGAGGAGGAAGGGAGGGAGGATGGGTTGGGTG
GAGGAGGGTGGTTGCGTTGGTGGGGCTCCAGGCGATATGCTCCATCATCA
ACGGCAGGAGGAGGGGGAGGAGGAGAGGGGGAAGAAAGAGAAGGGGAGCA
GGAGGAGGAGGAATTGGAGGAGGAAACGGAGGAGGAGGAGCATGTGATGG
TTTTCCAGCTTTCGCCCGAGAGGCGAGGAGGAGGAGGAGGAGAAGGAGAA
GGAGGAGGAGGAGGAGGAGGAGGAGACGGAGGAGGAGGAGATGTAGAGCT
TGGAGAAATGGAGGGAGAGATGGAGGAGGGGCAGGAGAGGAGGAATGAAA
ATGTGATGGCAATGGCCCAATAAGACGAAGCGGAGGTGGAGGAGGAAGAG
GAGGAGGAGGAGGAGGAGGAG
back to top

protein sequence of NO01G03740.1

>NO01G03740.1-protein ID=NO01G03740.1-protein|Name=NO01G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MPGHVPHSSRLLSTLIPPQTPTPTHSSTPTGHGINTKVLKLTIGQAHLHP
HPLPPQGAMVLISRRKGRSEGSLPLLLLVLLLIVHNLGQVLGSAVVTTSA
TLTTTFPDHIDLAYDIDQRLLENRACEDLSDCRSCFRTPGCGFCGGTGQC
MPEAHASTCGKGWSNAGVCYTTCPVESVPFHDAAGVIQLGAQAPRPVKYI
PGDACTYTIWPLLDTGTTGGNGPTGGNRRTLMIRLQFEYMDLGPGDSLSI
FSNGLDGPKILSIGGNGEGVVNRIITSRSSSVVLRLNANGHEGGTGFRVY
WRVIENSPLDIYLISAIIVTSILTCILCSCCCNNCVAMMVGQHHDDGVGG
GGMGRFGLSFGVGARAAGAAGATGRGMARALSAQEKARLPIAPYDPGPGA
GGEEGKEGGKEGGLENGPSSIFQCDMRECCICLSDFERTDLVRKLPCGHL
FHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGGSGGGMGPRALI
DLLRQRMLVHVRRNPPRARTYPAAAAAAPAAPVLAAGGGVGGEREEEGRE
DGLGGGGWLRWWGSRRYAPSSTAGGGGGGEGEEREGEQEEEELEEETEEE
EHVMVFQLSPERRGGGGGEGEGGGGGGGGDGGGGDVELGEMEGEMEEGQE
RRNENVMAMAQ*
back to top

protein sequence of NO01G03740.2

>NO01G03740.2-protein ID=NO01G03740.2-protein|Name=NO01G03740.2|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MDLGPGDSLSIFSNGLDGPKILSIGGNGEGVVNRIITSRSSSVVLRLNAN
GHEGGTGFRVYWRVIENSPLDIYLISAIIVTSILTCILCSCCCNNCVAMM
VGQHHDDGVGGGGMGRFGLSFGVGARAAGAAGATGRGMARALSAQEKARL
PIAPYDPGPGAGGEEGKEGGKEGGLENGPSSIFQCDMRECCICLSDFERT
DLVRKLPCGHLFHSECVDSWFSFNSVCPLCKANVLDKLNQYPLPEGVDGG
SGGGMGPRALIDLLRQRMLVHVRRNPPRARTYPAAAAAAPAAPVLAAGGG
VGGEREEEGREDGLGGGGWLRWWGSRRYAPSSTAGGGGGGEGEEREGEQE
EEELEEETEEEEHVMVFQLSPERRGGGGGEGEGGGGGGGGDGGGGDVELG
EMEGEMEEGQERRNENVMAMAQ*
back to top
Synonyms
Publications