NO01G03600, NO01G03600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G03600 vs. NCBI_GenBank
Match: ORX92603.1 (mitochondrial import inner membrane translocase, subunit Tim17/22 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 184.1 bits (466), Expect = 6.400e-43 Identity = 87/151 (57.62%), Postives = 115/151 (76.16%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMPD-PTLP 208 R+PCP+ I++DVGGAF MG++GGGIWH KG++N+P+GER+ G ++SVKARAP++GG FAVWG F++FDC+ +R+KEDPWN+ILSG TGG+LA R G KAA +A +GG++LAMIEG IAIT+ FA E P MP P +P Sbjct: 9 RDPCPWVILNDVGGAFVMGAVGGGIWHSVKGIKNSPRGERISGALTSVKARAPVLGGNFAVWGGLFSTFDCAFKGIRQKEDPWNSILSGTLTGGVLAARGGVKAAATSAAVGGVLLAMIEGLGIAITRMFA------EQNRPVMPQVPDIP 153
BLAST of NO01G03600 vs. NCBI_GenBank
Match: ORX98140.1 (mitochondrial import inner membrane translocase, subunit Tim17/22 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 184.1 bits (466), Expect = 6.400e-43 Identity = 87/151 (57.62%), Postives = 116/151 (76.82%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMPD-PTLP 208 R+PCP+ I++D+GGAF MG++GGGIWH KG++N+PKGER+ G ++SVKARAP++GG FAVWG F++FDC+ +R+KEDPWN+ILSG TGG+LA R G KAA +AV+GG++LAMIEG IA+T+ FA E P MP P +P Sbjct: 9 RDPCPWVILNDIGGAFVMGAVGGGIWHSVKGIKNSPKGERISGALTSVKARAPVLGGNFAVWGGLFSTFDCAFKGIRQKEDPWNSILSGTLTGGVLAARGGFKAAATSAVVGGVLLAMIEGLGIAMTRMFA------EQNRPIMPQVPDIP 153
BLAST of NO01G03600 vs. NCBI_GenBank
Match: PSC76847.1 (mitochondrial import inner membrane translocase subunit TIM17-2-like [Micractinium conductrix]) HSP 1 Score: 183.0 bits (463), Expect = 1.400e-42 Identity = 81/134 (60.45%), Postives = 107/134 (79.85%), Query Frame = 0 Query: 57 GREPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPP 191 GREPCP RI+DDVGGAF MG++GGG+WH KG++N+P G R GGI +++ AP +GG+FAVWG F++FDC++ A+RKKEDPWN+I +GA TGG L +R G K+AGK+AV GG++LAMIEG I +T+ APP Sbjct: 11 GREPCPDRILDDVGGAFGMGAVGGGMWHLLKGMKNSPSGHRFVGGIDAIRREAPRIGGSFAVWGGLFSTFDCTLVALRKKEDPWNSIAAGALTGGFLQLRTGLKSAGKSAVFGGVLLAMIEGVGILLTRVTAPP 144
BLAST of NO01G03600 vs. NCBI_GenBank
Match: OZJ06953.1 (Mitochondrial import inner membrane translocase subunit tim17, partial [Bifiguratus adelaidae]) HSP 1 Score: 181.0 bits (458), Expect = 5.400e-42 Identity = 88/155 (56.77%), Postives = 116/155 (74.84%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMPD-PTLPPTGP 212 R+PCP+ I++D+GGAF MG++GGGIWH KG +N+P+GER G I+++KARAP++GG FAVWG F++FDC++ +R+KEDPWNAILSGA TGG+LA R G KAAG +A +GG +LA+IEG IAIT+F A E P MP P + P P Sbjct: 10 RDPCPWVILNDLGGAFVMGAVGGGIWHSVKGAKNSPRGERAIGAITAMKARAPVLGGNFAVWGGLFSTFDCTLKGLRQKEDPWNAILSGAATGGVLAARGGVKAAGISAAVGGCLLALIEGVGIAITRFMA------ESNRPVMPQLPEIQPPTP 158
BLAST of NO01G03600 vs. NCBI_GenBank
Match: ORX48031.1 (mitochondrial import inner membrane translocase, subunit Tim17/22 [Hesseltinella vesiculosa]) HSP 1 Score: 179.5 bits (454), Expect = 1.600e-41 Identity = 84/145 (57.93%), Postives = 112/145 (77.24%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMP 203 R+PCP+ I++D+GGAF MG++GGGIWH KG +N+P+GERL G +S++KARAP++GG FAVWG F++FDC++ +R+KEDPWN+ILSGA TGG LA R G KAAG +AV+GG +LA+IEG IAI++ T E P MP Sbjct: 9 RDPCPWVILNDLGGAFVMGAVGGGIWHSVKGAKNSPRGERLTGAVSAMKARAPVLGGNFAVWGGMFSTFDCALKGIRQKEDPWNSILSGALTGGCLAARGGAKAAGVSAVVGGGLLALIEGIGIAISRM------TAEQNRPVMP 147
BLAST of NO01G03600 vs. NCBI_GenBank
Match: PKA60626.1 (Mitochondrial import inner membrane translocase subunit TIM17-2 [Apostasia shenzhenica]) HSP 1 Score: 179.5 bits (454), Expect = 1.600e-41 Identity = 84/160 (52.50%), Postives = 116/160 (72.50%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMPDPTLPPTGPGMLSGF 218 REPCP RI+DDVGGAF MG++GG +H+ KG+ N+P GERL GG+ +V+ AP VGG+FAVWG F++FDC++ VR+KEDPWN+I++GA TGG L++R GP AAG++A+ GG++LA+IEGA I + + F+ P + P M P + G L GF Sbjct: 8 REPCPDRILDDVGGAFGMGAVGGSAFHFLKGLYNSPNGERLAGGVQAVRMNAPRVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLSMRQGPAAAGRSAIFGGILLALIEGAGIMLNRVFSAPQNLPPMDDPNIAAAAGVGGATGSLPGF 167
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_008876544.1 (hypothetical protein H310_11596 [Aphanomyces invadans] >ETV94953.1 hypothetical protein H310_11596 [Aphanomyces invadans]) HSP 1 Score: 179.1 bits (453), Expect = 2.000e-41 Identity = 86/154 (55.84%), Postives = 114/154 (74.03%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPAS--TPEMGGPAMPDPTLPPT 210 REPCP+RI++D+G AF MG++GGGI+H KG RN+P GER+RG + +VKAR+P++ G FA+WG F+S+DCS+AAVR+KEDPWN+IL+GA TGG LA+R+GP+AA AVIGG +LA+IEG I + K PP T E G PP+ Sbjct: 3 REPCPWRILEDMGSAFGMGAVGGGIFHSIKGARNSPPGERIRGAVFAVKARSPMLAGQFAIWGCLFSSYDCSLAAVRQKEDPWNSILAGAATGGTLAMRSGPRAALTQAVIGGTLLALIEGLGILLGKMVTPPPQEFTDEHGIDTSEQQLAPPS 156
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_009830886.1 (hypothetical protein H257_07147 [Aphanomyces astaci] >ETV79950.1 hypothetical protein H257_07147 [Aphanomyces astaci]) HSP 1 Score: 178.7 bits (452), Expect = 2.700e-41 Identity = 85/154 (55.19%), Postives = 114/154 (74.03%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPAS--TPEMGGPAMPDPTLPPT 210 REPCP+RI++D+G AF MG++GGGI+H KG RN+P GER+RG + +VKAR+P++ G FA+WG F+S+DCS+AA+R+KEDPWN+IL+GA TGG LA+R+GP+AA AVIGG +LA+IEG I + K PP T E G PP+ Sbjct: 3 REPCPWRILEDMGSAFGMGAVGGGIFHSIKGARNSPPGERVRGAVFAVKARSPMLAGQFAIWGCLFSSYDCSLAAIRQKEDPWNSILAGAATGGTLAMRSGPRAALTQAVIGGTLLALIEGLGILLGKMVTPPPQEFTDEHGVDTSEQQLAPPS 156
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_018292759.1 (NADH dehydrogenase 1 alpha subcomplex subunit 11 NDUFA11 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD74719.1 NADH dehydrogenase 1 alpha subcomplex subunit 11 NDUFA11 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 178.7 bits (452), Expect = 2.700e-41 Identity = 84/145 (57.93%), Postives = 112/145 (77.24%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMP 203 R+PCP+ I++D+GGAF MG++GGGIWH KG +N+P+GERL G ++++KARAP++GG FAVWG F++FDC + +R+KEDPWN+ILSGA TGG+LA R G KAA +AV+GG +LA+IEG IAIT+F T E P MP Sbjct: 10 RDPCPWVILNDLGGAFVMGAVGGGIWHSVKGAKNSPRGERLVGAVTAMKARAPVLGGNFAVWGGLFSTFDCGLKGIRQKEDPWNSILSGAFTGGVLAARGGAKAATVSAVVGGSLLAVIEGVGIAITRF------TAESNRPVMP 148
BLAST of NO01G03600 vs. NCBI_GenBank
Match: GAY02822.1 (Hypothetical protein PINS_010656 [Pythium insidiosum]) HSP 1 Score: 178.7 bits (452), Expect = 2.700e-41 Identity = 84/153 (54.90%), Postives = 110/153 (71.90%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFA--PPASTPEMGGPAMPDPTLPP 209 REPCP+RIV+D GG F +G++ G W+ FKG RN+P G+R RG I + K R P++ G FAVWGL F+SFDCS A+R+KEDPWN+IL+GA TGG LAIRAGP+AA A+IGG++LA IEG I + +FA P + +MG P + + L P Sbjct: 283 REPCPFRIVEDAGGGFMLGAVFGAGWYTFKGARNSPAGQRFRGAIYNAKMRTPVLAGGFAVWGLLFSSFDCSFEALRRKEDPWNSILAGAATGGTLAIRAGPRAAASQALIGGVLLAAIEGVGIMVNDYFASNPMGAPEDMGNPELDEQKLAP 435 The following BLAST results are available for this feature:
BLAST of NO01G03600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03600 ID=NO01G03600|Name=NO01G03600|organism=Nannochloropsis oceanica|type=gene|length=2290bpback to top protein sequence of NO01G03600.1 >NO01G03600.1-protein ID=NO01G03600.1-protein|Name=NO01G03600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
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