NO01G03600, NO01G03600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G03600 vs. NCBI_GenBank
Match: EWM29279.1 (Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 [Nannochloropsis gaditana]) HSP 1 Score: 324.7 bits (831), Expect = 3.000e-85 Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0 Query: 55 MEGREPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAMPDPTLPPTGPGMLSGF 218 MEGREPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAA+RKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAP ASTPEMG PA+PDPTLPPTGPGMLS F Sbjct: 1 MEGREPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAIRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPSASTPEMGAPALPDPTLPPTGPGMLSSF 163
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_009034781.1 (hypothetical protein AURANDRAFT_7941, partial [Aureococcus anophagefferens] >EGB10066.1 hypothetical protein AURANDRAFT_7941, partial [Aureococcus anophagefferens]) HSP 1 Score: 194.5 bits (493), Expect = 4.700e-46 Identity = 89/131 (67.94%), Postives = 106/131 (80.92%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFA 189 REPCPYRI+DD+GGA+ MG++GG IWH+ KG RNAPK + G I VK RAP+VGG FAVWG FA FDCS+ AVR KEDPWN+IL+GA TGG+LA RAGPKAAGKNA++GG++LA+IEG I ITK A Sbjct: 1 REPCPYRILDDIGGAYAMGAVGGSIWHFVKGWRNAPKNQGFSGAIEQVKVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA 131
BLAST of NO01G03600 vs. NCBI_GenBank
Match: OEU16142.1 (Tim17-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 194.5 bits (493), Expect = 4.700e-46 Identity = 89/137 (64.96%), Postives = 110/137 (80.29%), Query Frame = 0 Query: 55 MEGREPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPA 192 M REPCP+R+VDDVGGAFCMG+IGGG+WH KG R AP G R G +S+V ARAP++GG FAVWG FA FDCS+ A+R+KEDPWN+I+SGA TGG+LA+RAGP+AA A+IGG++LA+IEG I TK APP+ Sbjct: 7 MADREPCPWRVVDDVGGAFCMGNIGGGMWHSIKGARMAPAGARFAGSLSAVSARAPVLGGQFAVWGGLFACFDCSLTALRQKEDPWNSIVSGAATGGVLAVRAGPQAAASAALIGGVLLALIEGMGIMFTKMTAPPS 143
BLAST of NO01G03600 vs. NCBI_GenBank
Match: GAX25638.1 (hypothetical protein FisN_15Lu013 [Fistulifera solaris]) HSP 1 Score: 191.0 bits (484), Expect = 5.200e-45 Identity = 95/158 (60.13%), Postives = 118/158 (74.68%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPEMGGPAM-PDPTLPPTGPGML 215 REPCPYRI+DD+GGAFCMG IGGGIWH KG R AP G R+ G +S+V AR+P++GG FAVWG FA DC++ AVR+KEDPWN+I+SGA TGG+LA RAGP+AA AV+GG++LA+IEG I I++ AP T E AM D T PPT G++ Sbjct: 9 REPCPYRIIDDIGGAFCMGCIGGGIWHSVKGARLAPAGARMAGSMSAVIARSPVLGGQFAVWGGLFACCDCTLTAVRQKEDPWNSIISGAATGGILAARAGPRAAASAAVVGGVLLALIEGMGIMISRALAPAPPTAEDYERAMQQDVTAPPTMGGLM 166
BLAST of NO01G03600 vs. NCBI_GenBank
Match: OQR95370.1 (mitochondrial protein translocase, MPT family [Thraustotheca clavata]) HSP 1 Score: 185.3 bits (469), Expect = 2.900e-43 Identity = 83/133 (62.41%), Postives = 106/133 (79.70%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPP 191 REPCPYRI++D+GGAF MG++GGGI+H KG RN+P GER RG + +VKAR+PL+ G FA+WG F+SFDCS+AA+R+KEDPWN+I +GA TGG LAIR+GP+ A AVIGG +LA+IEG I + K PP Sbjct: 3 REPCPYRIIEDMGGAFGMGAVGGGIFHSIKGARNSPPGERFRGALYAVKARSPLLAGQFAIWGCLFSSFDCSLAAIRQKEDPWNSICAGALTGGALAIRSGPRVAATQAVIGGALLALIEGLGIMLGKMLTPP 135
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_005707451.1 (mitochondrial protein translocase, MPT family [Galdieria sulphuraria] >EME30931.1 mitochondrial protein translocase, MPT family [Galdieria sulphuraria]) HSP 1 Score: 184.9 bits (468), Expect = 3.700e-43 Identity = 82/138 (59.42%), Postives = 110/138 (79.71%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPPASTPE 196 REPCP+RI+DD+GGA+ MGSIGG +WH+FKG RN+PKG RLRG + +VK R+P++GG FAVWG F++FDC++A +R KEDPWNAI+SGA TGG+LA R+G A ++A IGG++LA+IEG I +T+ A +PE Sbjct: 8 REPCPHRILDDIGGAYAMGSIGGALWHFFKGARNSPKGARLRGAVDAVKLRSPVLGGNFAVWGGLFSTFDCALAGIRHKEDPWNAIMSGAITGGVLAARSGVGGATRSAAIGGILLALIEGMGILLTRMTADLGPSPE 145
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_005711142.1 (unnamed protein product [Chondrus crispus] >CDF40848.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 184.9 bits (468), Expect = 3.700e-43 Identity = 83/129 (64.34%), Postives = 107/129 (82.95%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKF 187 REPCP+RI+DDVGGAF MG+IGG IWH+ KG RN+P+G R G I +VK RAP +GG+FAVWG F++FDCS+ +R KEDPWN+I SGA TGG+LA R+G +AAGK+A +GG++LA+IEG SIAIT++ Sbjct: 14 REPCPHRIIDDVGGAFGMGAIGGSIWHFLKGARNSPQGARFIGAIDAVKVRAPALGGSFAVWGGLFSTFDCSLQGIRGKEDPWNSIASGALTGGVLASRSGMRAAGKSAAVGGVLLALIEGISIAITRY 142
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_008608320.1 (hypothetical protein SDRG_04423 [Saprolegnia diclina VS20] >EQC37993.1 hypothetical protein SDRG_04423 [Saprolegnia diclina VS20]) HSP 1 Score: 184.9 bits (468), Expect = 3.700e-43 Identity = 83/133 (62.41%), Postives = 106/133 (79.70%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPP 191 REPCPYRI++D+GGAF MG++GGGI+H KG RN+P GER RG + +VKAR+PL+ G FA+WG F+SFDCS+AA+R+KEDPWN+I +GA TGG LAIR+GP+ A AVIGG +LA+IEG I + K PP Sbjct: 3 REPCPYRIIEDMGGAFGMGAVGGGIFHSIKGARNSPPGERFRGAVYAVKARSPLLAGQFAIWGCLFSSFDCSLAAIRQKEDPWNSICAGALTGGALAIRSGPRVAFTQAVIGGALLALIEGLGIMVGKMLTPP 135
BLAST of NO01G03600 vs. NCBI_GenBank
Match: XP_012207404.1 (hypothetical protein SPRG_12347 [Saprolegnia parasitica CBS 223.65] >KDO21846.1 hypothetical protein SPRG_12347 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 184.5 bits (467), Expect = 4.900e-43 Identity = 83/133 (62.41%), Postives = 106/133 (79.70%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPP 191 REPCPYRI++D+GGAF MG++GGGI+H KG RN+P GER RG + +VKAR+PL+ G FA+WG F+SFDCS+AA+R+KEDPWN+I +GA TGG LAIR+GP+ A AVIGG +LA+IEG I + K PP Sbjct: 3 REPCPYRIIEDMGGAFGMGAVGGGIFHSVKGARNSPPGERFRGAVYAVKARSPLLAGQFAIWGCLFSSFDCSLAAIRQKEDPWNSICAGALTGGALAIRSGPRVAFTQAVIGGALLALIEGLGIMVGKMLTPP 135
BLAST of NO01G03600 vs. NCBI_GenBank
Match: OQR91351.1 (mitochondrial protein translocase, MPT family [Achlya hypogyna]) HSP 1 Score: 184.1 bits (466), Expect = 6.400e-43 Identity = 83/133 (62.41%), Postives = 106/133 (79.70%), Query Frame = 0 Query: 58 REPCPYRIVDDVGGAFCMGSIGGGIWHYFKGVRNAPKGERLRGGISSVKARAPLVGGAFAVWGLCFASFDCSIAAVRKKEDPWNAILSGACTGGLLAIRAGPKAAGKNAVIGGLVLAMIEGASIAITKFFAPP 191 REPCPYRI++D+GGAF MG++GGGI+H KG RN+P GER RG + +VKAR+PL+ G FA+WG F+SFDCS+AA+R+KEDPWN+I +GA TGG LAIR+GP+ A AVIGG +LA+IEG I + K PP Sbjct: 3 REPCPYRIIEDMGGAFGMGAVGGGIFHSIKGARNSPPGERFRGAVYAVKARSPLLAGQFAIWGCLFSSFDCSLAAIRQKEDPWNSISAGALTGGALAIRSGPRVAVTQAVIGGALLALIEGLGIMLGKMLTPP 135 The following BLAST results are available for this feature:
BLAST of NO01G03600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03600 ID=NO01G03600|Name=NO01G03600|organism=Nannochloropsis oceanica|type=gene|length=2290bpback to top protein sequence of NO01G03600.1 >NO01G03600.1-protein ID=NO01G03600.1-protein|Name=NO01G03600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bpback to top Synonyms
Publications
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