NO01G03560, NO01G03560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03560 vs. NCBI_GenBank
Match: EWM29297.1 (trna guanosine-2 -o-methyltransferase trm13 [Nannochloropsis gaditana]) HSP 1 Score: 536.2 bits (1380), Expect = 1.300e-148 Identity = 297/564 (52.66%), Postives = 359/564 (63.65%), Query Frame = 0 Query: 48 PKPDRCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAFPQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTK---TRKEDKVEE--KAEEGATTALADIDKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVPSLTSSRG-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHND--------LSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILAWSSRAGEGEERKLRDGE 592 PK DRC+FFLKRK+R+CTVPRLP S WCGNHQHL AG+ ++ A RSKTQEKRGGQRR+PCPLD HTVYEREL+AHL+VCNVK+E + LE +PFYR NSG+ R P L V+E A+ A+ R L +K+ HPRG+ +EQ+ GPVA KILA++ + N TSE+KARH++QQASL+SHL+RRGLL RSTCVE+GAGRGTLG AVH AFP+ARV+LVER+GV+ KADAP+RRTGEG F RYRLDIRDLWI GLPL T PLVFMGKHVCGVATDLSLRA+A +++ + +K E E+ + EGAT D + + + K VG+VIATCCYHVC Y+DYVG+E WEN+L L R +FEVAQ+SACWV SLTS+RG A +D LSR++KI+IG ACKRLIDYGRL +LRASGLEAEC++YCEPDVSPENSCILAW+ E E R+ E Sbjct: 33 PKQDRCAFFLKRKLRFCTVPRLPTSKWCGNHQHLEAGY-ENCAAAARSKTQEKRGGQRRVPCPLDSNHTVYERELSAHLRVCNVKREQKFLEDKPFYRRSINSGSLRR------PGLNPQPLDVDEVPAILARIRGLQHQKQSHPRGEEVEQITSGPVAEKILATMVAKNWTSESKARHLVQQASLISHLHRRGLLGARSTCVELGAGRGTLGHAVHQAFPEARVVLVERAGVRLKADAPYRRTGEGGVFARYRLDIRDLWINGLPLGP--------------GGLTSPLVFMGKHVCGVATDLSLRAVADYVRDFEGSKEEGAAGEGPCEQAPRLGEGATIVGQDEMGSPRAQNASKGKRRARVGLVIATCCYHVCRYEDYVGVEAWENDLGLGREEFEVAQRSACWVSSLTSARGHRYKPRLREEGKAGRESYADSCEEEETGAEGEGGVEDDRGVRGQREETVRRTSGDAGGEQVGGRRQAEMDDAYTSLGKGLSRDQKIQIGRACKRLIDYGRLAYLRASGLEAECLLYCEPDVSPENSCILAWTP-INEEEAENFRNVE 574
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_005856020.1 (coiled-coil domain containing 76, partial [Nannochloropsis gaditana CCMP526] >XP_005856065.1 coiled-coil domain containing 76, partial [Nannochloropsis gaditana CCMP526] >EKU20296.1 coiled-coil domain containing 76, partial [Nannochloropsis gaditana CCMP526] >EKU20338.1 coiled-coil domain containing 76, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 246.1 bits (627), Expect = 2.700e-61 Identity = 124/197 (62.94%), Postives = 152/197 (77.16%), Query Frame = 0 Query: 118 YERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAFPQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPL 315 YEREL+AHL+VCNVK+E + LE +PFYR NSG+ R P L V+E A+ A+ R L +K+ HPRG+ +EQ+ GPVA KILA++ + N TSE+KARH++QQASL+SHL+RRGLL RSTCVE+GAGRGTLG AVH AFP+ARV+LVER+GV+ KADAP+RRTGEG F RYRLDIRDLWI GLPL Sbjct: 1 YERELSAHLRVCNVKREQKFLEDKPFYRRSINSGSLRR------PGLNPQPLDVDEVPAILARIRGLQHQKQSHPRGEEVEQITSGPVAEKILATMVAKNWTSESKARHLVQQASLISHLHRRGLLGARSTCVELGAGRGTLGHAVHQAFPEARVVLVERAGVRLKADAPYRRTGEGGVFARYRLDIRDLWINGLPL 191
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_012195702.1 (hypothetical protein SPRG_19285 [Saprolegnia parasitica CBS 223.65] >KDO33675.1 hypothetical protein SPRG_19285 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 189.1 bits (479), Expect = 3.900e-44 Identity = 150/542 (27.68%), Postives = 225/542 (41.51%), Query Frame = 0 Query: 52 RCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRA-------------------THASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAFPQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADIDKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVPSLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHNDLSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILA 575 +C F L+RK RYC V R+ S++CGNH G + +K +++ ++ R+PC LDP HTVY +L HL VCN KE ++ P++ NSG+ A +H +P +A +++ A+ + G + + +K TK+L E+ S RH+ QQAS++ H+ R+ LL+ T +E+GAGR L A+ +P + +L++R+G + KAD + S R ++DIR L + G+ A PLV + KH+CGVATDLSLRA+A T L + +AN G+ IA CC+H C++DDYV T+ EL + ADF+V + W + G SRE++ +G KR+ID GR+ +LRA G+ AE V YCE S EN +LA Sbjct: 48 QCMFKLERKARYCNVARVAGSLYCGNHIERDEGVVSNKSKKFKAEMRQ------RVPCTLDPSHTVYLYDLKKHLVVCNKLKEAEAMQALPYFSRNINSGSHAAAPQDNTDVSVDEPDNETEENSHEAPSAARQASIFQILAKMDYTAFAAKVEAAYAKAVGSIPTETLKHDACTKLLVEKEATG-ASHGALRHIQQQASIIGHMERKSLLHKSFTYMELGAGRAMLSLALTQLYPASPFILIDRAGTRGKAD---QYIATESTCTRAKIDIRHLNLAGMK-----------------EATETPLVCLSKHLCGVATDLSLRALA--------------------------TTLPPV-QANAMSPHLH-------GLAIALCCHHACSWDDYVN-PTYLEELGFSAADFKVLVSLSGWATCGMGTEGDAVETVLGW--------------------------------------------------------SREKRTALGRKSKRVIDMGRVLYLRAHGMHAELVHYCEETDSLENCLLLA 471
BLAST of NO01G03560 vs. NCBI_GenBank
Match: OQR96828.1 (tRNA guanosine-2'-O-methyltransferase [Thraustotheca clavata]) HSP 1 Score: 188.3 bits (477), Expect = 6.700e-44 Identity = 151/542 (27.86%), Postives = 228/542 (42.07%), Query Frame = 0 Query: 52 RCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGD----------VIEQLIKGPVATKILASIESNNVTSEAKA--------RHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAFPQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADIDKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVPSLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHNDLSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILAW 576 RC F L+RK R+C V R+P S +CGNH L G + + K +++ ++R+PC LDP HTVY +L HL +CN K+ +++ P+Y + NSG++ P A ++ EE A AS + + D +LI G + TK L + + +E +A RH+ QQAS++ H+ + LL+ T +E+GAGR L A+ +P + +L++R+G + KAD + S R ++DIR L + G+ A PLV + KH+CGVATDLSLRA+ ATT + DK K G IA CC+H CN+DDY+ + + ++ T +F++ + W ++ G RE++ +G CKRLID GR+ +LR G+ AE V YCE S EN +LAW Sbjct: 29 RCMFKLERKARFCNVARVPGSQYCGNHIDLDTGVESNKTKKFKAEM------RKRVPCTLDPTHTVYLFDLKKHLVICNKLKDAEAMKQLPYYSLNINSGSSTE----KPEEAEETSGKDEENEHSQPTAARQASVFQTLSKMDYNVFAVRLEKAYNELI-GSIPTKTLNHEACSKLLTEKQATGAAHGALRHIQQQASILGHMEEKKLLHPSYTYMELGAGRAMLSLALTQLYPASPFILIDRAGTRGKAD---QYIATESKCTRAKIDIRHLNLSGMQ-----------------EAVNTPLVCLSKHLCGVATDLSLRAL-------------------------ATTLPPNEDKKMSPHLK---------GFAIALCCHHACNWDDYINPD-YFLKMGFTAVEFKLLISLSGWATCGMATEGDAVETVLGW--------------------------------------------------------GREKRTTLGRICKRLIDMGRVHYLRDRGMHAELVHYCEQSESLENCLLLAW 448
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_008615902.1 (hypothetical protein SDRG_11634 [Saprolegnia diclina VS20] >EQC30576.1 hypothetical protein SDRG_11634 [Saprolegnia diclina VS20]) HSP 1 Score: 188.0 bits (476), Expect = 8.800e-44 Identity = 149/542 (27.49%), Postives = 226/542 (41.70%), Query Frame = 0 Query: 52 RCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRA-------------------THASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAFPQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADIDKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVPSLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHNDLSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILA 575 +C F L+RK RYC V R+ S++CGNH G + +K +++ ++ R+PC LDP HTVY +L HL VCN KE ++ P++ NSGA +H +P +A +++ A+ + G + + +K TK+L E+ S RH+ QQAS++ H+ R+ LL+ T +E+GAGR L A+ +P + +L++R+G + KAD + S R ++DIR L + G+ A PLV + KH+CGVATDLSLRA+A T L + + + D++ G+ IA CC+H C++DDYV T+ EL + ADF+V + W + G SRE++ +G KR+ID GR+ +LRA G+ AE V YCE S EN +LA Sbjct: 46 QCMFKLERKARYCNVARVAGSLYCGNHIERDEGFVSNKSKKFKAEMRQ------RVPCTLDPSHTVYLYDLKKHLVVCNKLKEAEAMQALPYFSRNINSGAHAATPQESTEPSVDEPENETEDNSHQAPSAARQASILQILAKMDYNAFAAKIEAAYAKAIGSIPTETLKHDGCTKLLLEKEATG-ASHGALRHIQQQASIIGHMERKSLLHPSFTYMELGAGRAMLSLALTQLYPASPFILIDRAGTRGKAD---QYIATESKCTRAKIDIRHLNLAGMK-----------------EATETPLVCLSKHLCGVATDLSLRALA--------------------------TTLPPV-------QANAMSPDLH-GLAIALCCHHACSWDDYVN-PTYLKELGFSAADFKVLVSLSGWATCGMGTEGDAVETVLGW--------------------------------------------------------SREKRTALGRKSKRVIDMGRVLYLRAHGMHAELVHYCEQTESLENCLLLA 469
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_021380827.1 (tRNA:m(4)X modification enzyme TRM13 homolog [Lonchura striata domestica] >OWK64517.1 tRNA:m(4)X modification enzyme TRM13 [Lonchura striata domestica]) HSP 1 Score: 186.8 bits (473), Expect = 2.000e-43 Identity = 151/544 (27.76%), Postives = 239/544 (43.93%), Query Frame = 0 Query: 44 PLYAPKPDRCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAF---PQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADI--DKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVP---SLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHND-----LSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILA 575 P P P RC+ F+ RK R+C + P +CG H H +E++ ++R+PCPLDPKHTVYE +L HLK CN +++ + P Y V + S +S+L++EE + L K + ++ H + ++ + L S+ E+ +H+ QQAS++ ++ + LL VE GAGRG L V +A + +LVER+ +FK D +R S FER ++DI+ L + +P+ + + P+V +GKH+CG ATDL+LR + + T + + EE A + A ++ K+ G E+++ V G+VIA CC+H C++ YVG E +++ L +F Q+ + W T+S+ AS +D LS EE+ EIG CKRLID+GR+++L+ G +A Y EP VS EN + A Sbjct: 4 PGAGPGPGRCAHFVLRKRRFCRMIPAPGRRFCGEHGH-----------------EEEQNDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPK-----PVYFVQDINAGLKDVVEISEKQVPLSSLSLEELQNLIIKLKKASNGLEVHLKEQILSH--------QALQEALSDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDIALENVENVQFLLVERATTRFKVDGKHKR--RDSIFERLQVDIQHLCLNKVPI---------------LEKKKLPVVGIGKHLCGAATDLALRCL------VESYTTSCDGEDEEPAPKRCRAAQTEVAPHKSAGNESTTEVRKPV-AGIVIALCCHHKCDWTHYVGREFFKS-TGLGPVEFHYFQRMSSWATCGMQETTSK------------------------------------VSASEDGEDQTNDTEEHEHTLSRTASGSDTLQGILSVEERKEIGCLCKRLIDHGRIEYLQQQGYKAAMQYYTEPAVSLENVLLTA 456
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_009086749.2 (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Serinus canaria]) HSP 1 Score: 183.0 bits (463), Expect = 2.800e-42 Identity = 149/541 (27.54%), Postives = 237/541 (43.81%), Query Frame = 0 Query: 47 APKPDRCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAF---PQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADI--DKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVP---SLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHND-----LSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILA 575 AP+P RC+ F+ RK R+C + P +CG H H +E++ ++R+PCPLDPKHTVYE +L HLK CN +++ + P Y V + A +S+L++EE + L + + + H + ++ + L S+ E+ +H+ QQAS++ ++ + LL VE GAGRG L + +A + +LVER+ +FK D +R S FER ++DI+ L + +P+ + + P+V +GKH+CG ATDL+LR + + T + K EE A + ++ K+ G E + V G+VIA CC+H C++ YVG E +++ + L +F Q+ + W T+S+ AS +D LS EE+ EIG CKRLID+GR+++L+ G +A Y EP VS EN + A Sbjct: 13 APEPGRCAHFVLRKKRFCKMIPAPGRRFCGEHGH-----------------EEEQNDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPK-----PVYFVQDINAGLKDAAEIPEKQVPLSSLSIEELQNLITRLKKATNGLELHLKEQILSH--------QALQEALSDPKNGESAFKHLKQQASILGNMEKLHLLGPGKCFVEFGAGRGKLSHWLDIALENVESVQFLLVERATTRFKVDGKHKR--RDSIFERLQVDIQHLCLNKVPI---------------LEKKKLPVVGIGKHLCGAATDLALRCL------VESYTTCCDGKDEEPAPKRCRAVQTEVAPHKSAGNESITEDHKPV-AGIVIALCCHHKCDWTHYVGREFFKS-VGLGPVEFHYFQRMSSWATCGMQETTSKA------------------------------------STSEDSGDQTNDTEEHEHTLSRTASGSDTLQGILSVEERKEIGCLCKRLIDHGRIEYLQQRGYKAALQYYTEPAVSLENVLLTA 462
BLAST of NO01G03560 vs. NCBI_GenBank
Match: OQR90398.1 (tRNA guanosine-2'-O-methyltransferase [Achlya hypogyna]) HSP 1 Score: 182.6 bits (462), Expect = 3.700e-42 Identity = 150/552 (27.17%), Postives = 225/552 (40.76%), Query Frame = 0 Query: 52 RCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSG--AAGRATHASPPSATVS--------------------------TLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAFPQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADIDKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVPSLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHNDLSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILAW 576 +C F L +K RYC V R+ S++CGNH +D+ + + K ++R+PC LDP HTVY +L HL +CN KE + P+Y NSG A + A+P T + TLT + A A+ + + GD+ + + K+L ++ A RH+ QQAS++ H+ +GLL+ +T +E+GAGR L A+ +P + +LV+RSG + KAD + S R ++DIR L + G+ A P+V + KH+CGVATDLSLRA+A L GA + G+ IA CC+H CN++DY+ ++ +L T A+F+V + W + G SRE++ +G CKRLID GR+++LR+ G+EA V YCE S EN +LAW Sbjct: 29 QCMFMLVKKGRYCNVGRVAGSLYCGNH------IVEDEGVVSNKSKKFKAELRQRVPCTLDPSHTVYAFDLKKHLIICNKLKEAEATKALPYYAFNINSGNNATDSPSEAAPADETAAEGDNDNDLEDGRHNQPSAARQANVFQTLTTMDHNAFAARIEAVFA----RVVGDIPTRTLNHEACAKLLTDKQATGAAHGA-LRHIQQQASILGHMEAKGLLHPSNTYMELGAGRAMLSLALTQLYPASPFILVDRSGTRGKAD---QYIAPESKCTRAKIDIRHLNLAGMQ-----------------EAVNTPVVALSKHLCGVATDLSLRALATTL---------------PPTTPGALSPHLR-------------------GLAIALCCHHACNWEDYI-HPSFLTDLGFTPAEFKVLVSLSGWATCGMGTEGDAVETVLGW--------------------------------------------------------SREKRTALGRQCKRLIDMGRVEYLRSRGMEAHLVHYCEQAESLENCLLLAW 458
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_007901106.1 (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog [Callorhinchus milii]) HSP 1 Score: 181.4 bits (459), Expect = 8.200e-42 Identity = 149/534 (27.90%), Postives = 223/534 (41.76%), Query Frame = 0 Query: 47 APKPDRCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAF---PQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADIDKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWV---PSLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHNDLSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILA 575 AP RCS+F+ +K RYC + CG H+ T S+ Q K R+ CPLDPKHTV E +L HLK CN +++ + + +YR N G A S + L+ EE + K R S + + + L + ++ ++H+ QQASLV +L R GLL + VE GAGRG L V A P +LVER+ +FK D + +GS F R ++DI+ L + +PL +S +T P+V +GKH+CG ATDLSLR + + + KED E A + + + +K E+ +G+ +A CC+H C + YVG E + ++ L R DF++ Q+ + W S + SR L+ E+ +G CKRLID+GR+++L+ G A Y P +SPEN + A Sbjct: 12 APLSGRCSYFVVKKRRYCRMVTARGHRLCGEHR-------------TESENQGK-----RIRCPLDPKHTVDEDKLEKHLKKCNSREKPKPV----YYRHNVNGGPED-AEENSKQQVPLCDLSKEEIEIMITKLRKATS--------GLNSTITDRTLTHTALREALDDPKNGDSASKHLKQQASLVGNLERLGLLGSNRCFVEFGAGRGKLSHWVARALQGVPNVHFLLVERASTRFKVDG--KHQNQGSMFGRLQIDIQHLSLDKVPLLTS---------------ETLPVVGIGKHLCGAATDLSLRCLVERYRV-------KEDNDTEPATKRLKADPTETQQQQRDPDK-EVNSSPTLGIAVALCCHHKCEWKHYVGKEFFSSQ-GLDREDFQIFQRMSSWATCEKSCSLSRAASAEPPQEHGWGESSQCAAEVLEM----------------------------------------LTVRERESLGLLCKRLIDHGRIEYLQQRGFMATLQYYTSPCISPENVLLTA 448
BLAST of NO01G03560 vs. NCBI_GenBank
Match: XP_005482098.2 (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog [Zonotrichia albicollis]) HSP 1 Score: 181.4 bits (459), Expect = 8.200e-42 Identity = 156/533 (29.27%), Postives = 244/533 (45.78%), Query Frame = 0 Query: 48 PKPDRCSFFLKRKMRYCTVPRLPDSVWCGNHQHLAAGHDDDDAKPTRSKTQEKRGGQRRLPCPLDPKHTVYERELNAHLKVCNVKKEMRGLERQPFYRVGANSGAAGRATHASPPSATVSTLTVEEARALFAKARHLASEKRPHPRGDVIEQLIKGPVATKILASIESNNVTSEAKARHVIQQASLVSHLNRRGLLYNRSTCVEMGAGRGTLGQAVHLAF---PQARVMLVERSGVKFKADAPFRRTGEGSYFERYRLDIRDLWIKGLPLSSSSPSSFXXXXXXXVAAQTPPLVFMGKHVCGVATDLSLRAIAKFLQAADKTKTRKEDKVEEKAEEGATTALADI--DKANGTREKQEIKEDVNVGVVIATCCYHVCNYDDYVGMETWENELKLTRADFEVAQKSACWVP-SLTSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASHNDLSREEKIEIGWACKRLIDYGRLQFLRASGLEAECVVYCEPDVSPENSCILA 575 P+P RC+ F+ RK R+C + P +CG H H +E++ ++R+PCPLDPKHTVYE +L HLK CN +++ + P Y V + + +S+L++EE + L + + ++ H + ++ + L S+ E+ +H+ QQAS++ ++ R LL VE GAGRG L V +A + +LVER+ +FK D +R S FER ++DI+ L + +P+ + + P+V +GKH+CG ATDL+LR + + T + K EE A + A ++ K+ G E + V G+VIA CC+H C++ YVG E +++ + L +F Q+ + W + + G XXXXXXXXXXXX LS EE+ E+G CKRLID+GR+++L+ G +A Y E VS EN + A Sbjct: 20 PEPGRCAHFVLRKKRFCRMIPAPGRRFCGEHGH-----------------EEEQNDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPK-----PVYFVQDINAGLKDVSEIPEKQVPLSSLSIEELQNLITRLKKASNGLELHLKEQILSH--------QALQEALSDPKNGESAFKHLKQQASILGNMERLHLLGPGRCFVEFGAGRGKLSHWVDIALENVESVQFLLVERATTRFKVDGKHKR--RDSIFERLQVDIQHLCLNKVPI---------------LEKKKLPVVGIGKHLCGAATDLALRCL------VESYTTCCDGKDEEPAPKRCRAAQTEVAPHKSAGNESTTEDHKPV-AGIVIALCCHHKCDWTHYVGREFFKS-VGLGPVEFHYFQRMSSWATCGMQETTG-----------------------------KASTSEDSEXXXXXXXXXXXXLSSTASGSDTLQGTLSVEERKELGCLCKRLIDHGRIEYLQQQGYKAALQYYTEAAVSLENVLLTA 468 The following BLAST results are available for this feature:
BLAST of NO01G03560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03560 ID=NO01G03560|Name=NO01G03560|organism=Nannochloropsis oceanica|type=gene|length=2169bpback to top protein sequence of NO01G03560.1 >NO01G03560.1-protein ID=NO01G03560.1-protein|Name=NO01G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=602bpback to top Synonyms
Publications
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