NO01G03520, NO01G03520 (gene) Nannochloropsis oceanica

Overview
NameNO01G03520
Unique NameNO01G03520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2151
Alignment locationchr1:918280..920430 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:918280..920430 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016874ligase activity
GO:0016884carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR003789Asn/Gln_tRNA_amidoTrfrase-rel
IPR014746Gln_synth/guanido_kin_cat_dom
IPR017959Asn/Gln-tRNA_amidoTrfase_suB/E
IPR006075Asn/Gln-tRNA_Trfase_suB/E_cat
IPR018027Asn/Gln_amidotransferase
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
BLAST of NO01G03520 vs. NCBI_GenBank
Match: EWM29278.1 (aspartyl glutamyl-trna amidotransferase subunit b [Nannochloropsis gaditana])

HSP 1 Score: 666.8 bits (1719), Expect = 6.300e-188
Identity = 339/431 (78.65%), Postives = 371/431 (86.08%), Query Frame = 0
Query:  153 LALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLELPSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAAL 584
            +ALQCEIA EVRYDRKNYFYPDTPKNYQITQYTHPLG  G LELPSG+ V+ITRLH+EEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQK+LRYVG SDGNMAEGSMRLD+NVSIRP+GE+ LR KVEVKNVNSFKSVQQAVDFEV+RQA+AYDA E VRQETRMWDEKEL++KLMRVKEGESDYRYFPEPDVPPL L  ++V AW++ LQELPA KRARYQD AG  LDAETTK LT+DL VA+F+E AVE H A+ KEAAKWL+GDI GHLNGNKG+VK+FGKIKLTPAGLAELVGLI +GKITG             W G       GE GAVL LV+ RG+EAITDPA IA LV+KV++ANP KV D+R GKTK+LGFFVGMVLKESGSRA+PEV Q LT  AL
Sbjct:    1 MALQCEIAHEVRYDRKNYFYPDTPKNYQITQYTHPLGAGGCLELPSGRRVSITRLHVEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKILRYVGASDGNMAEGSMRLDINVSIRPRGEEGLRPKVEVKNVNSFKSVQQAVDFEVVRQARAYDAGEAVRQETRMWDEKELASKLMRVKEGESDYRYFPEPDVPPLALASSVVQAWRATLQELPAAKRARYQDPAGLNLDAETTKFLTDDLAVARFFEAAVEQHGAEPKEAAKWLVGDIAGHLNGNKGRVKEFGKIKLTPAGLAELVGLIGQGKITGKIAKELLPELLDEWEG-------GEEGAVLDLVQARGLEAITDPAVIAALVQKVLEANPEKVEDFRGGKTKLLGFFVGMVLKESGSRANPEVVQSLTVEAL 424          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: CBN78448.1 (glutamyl-tRNA(Gln) amidotransferase, B subunit [Ectocarpus siliculosus])

HSP 1 Score: 608.6 bits (1568), Expect = 2.000e-170
Identity = 314/502 (62.55%), Postives = 382/502 (76.10%), Query Frame = 0
Query:   84 LQEVLERYEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLELPSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAALKD 586
            LQ  LE++E V+GIE+HAQ+ S TKAYCSCST Y+P+ PN N+CPVC GEPG+LPVPNARVVEL++KA +AL C IAAE ++DRKNYFYPDTPKNYQITQY  P+   G + LPSGK V +TRLH+EEDSAKM HQG++SLAGSTHSLVDFNRAG PLAEIVSEPDMRSG EAAEYGRELQ+VLRY+GVSDGNMAEGSMRLDVNVS+RPKGEK L  KVE+KN+NSF++VQ++VDFE++RQ++ Y+  E +RQETR+WDEK+ +T++MRVKEGE+DYRYFPEPD+PPL LP  L+  W+SEL ELPA KR RYQ     GL  E   AL++D +VA ++E+AV    +D  EA KWLIGDI G+LN  K  +++ G   LTP+GLAELVGLI E KI+G                 E   GE E G V  LV+ERGM+AI DPA I   V  VM+AN  KV  +R+GKTK+ GFFVG  +  SG +ADPE+   +    L+D
Sbjct:   87 LQAALEKWEPVIGIEIHAQISSSTKAYCSCSTLYSPDSPNTNVCPVCLGEPGSLPVPNARVVELSAKAGMALGCTIAAETKWDRKNYFYPDTPKNYQITQYDRPIAEHGEIVLPSGKKVGVTRLHMEEDSAKMNHQGAESLAGSTHSLVDFNRAGTPLAEIVSEPDMRSGIEAAEYGRELQRVLRYLGVSDGNMAEGSMRLDVNVSLRPKGEKCLNTKVELKNLNSFRAVQESVDFEIVRQSRCYETDEVIRQETRLWDEKKKATQIMRVKEGEADYRYFPEPDIPPLALPAELLQRWRSELCELPAGKRERYQSE--LGLSEEDASALSDDQSVALYFEEAVGA-GSDPGEACKWLIGDIAGYLNSKKKGIREIG---LTPSGLAELVGLIRERKISGRIAKELL---------PELLGGEWE-GGVEELVEERGMQAINDPAEIEGFVRDVMKANADKVEQFRSGKTKLQGFFVGQAVALSGGKADPELTGEVARRLLED 572          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: CEM39017.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 526.2 bits (1354), Expect = 1.300e-145
Identity = 279/513 (54.39%), Postives = 351/513 (68.42%), Query Frame = 0
Query:   84 LQEVLERYEAVVGIEVHAQLLSDTKAYCSCSTHY--NPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLELPSGKMVAITRLHIEEDSAKMVHQGSD-SLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAA----------EPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAAL 584
            L  V  +YE VVG+E H QL + TKA+CSCST Y  + + PN +ICPVC GEPG+LPVPN RVVELA KA LAL CEIA   ++DRKNYFYPDTPKNYQITQY  P+   G L LPSGK V I RLH+EEDSAKM+H G D ++ G+ +SL+DFNRAG+PL EIVSE D+RSG EAAEYGREL KVL+Y+G SD  MA GS+RLDVNVSIRPKG   LR KVEVKNVNSF++VQQAVD+E +RQA+ YD+           E +RQETR WDEK  STK+MRVKEGE+DYRYFPEPD+PPL++    +  W++EL ELPA KR RY  ++  GLD E  + LT+D  VA++ E A  +  A+   AA+W++ DIFG L   +        IKLTPA LAE++ LI    I G             W          + G+V ALV ERGM++I DP  I  +   ++  NP ++  YR GK+++ GFFVG ++K+SG+RADP ++Q +  + L
Sbjct:   81 LDTVASKYETVVGVECHVQLDTATKAFCSCSTDYDIDSSDPNVHICPVCVGEPGSLPVPNRRVVELAGKAGLALNCEIAPSTKFDRKNYFYPDTPKNYQITQYDRPIAEHGYLMLPSGKRVGIRRLHMEEDSAKMLHIGGDGTVLGADYSLIDFNRAGVPLIEIVSEADIRSGEEAAEYGRELAKVLKYIGASDCVMAAGSLRLDVNVSIRPKGTDELRTKVEVKNVNSFRAVQQAVDYETVRQAELYDSMEGEASQSSIDEGIRQETRTWDEKTQSTKVMRVKEGEADYRYFPEPDIPPLSIDQHTIQQWRNELPELPASKRERY--ASQLGLDPEDARILTDDKQVAEYLE-ATLMEGAEPSGAARWVVNDIFGWLGEKQNVGMAITDIKLTPARLAEMLRLIDSKYINGKIAKDLLPVLLSEW----------DDGSVRALVDERGMQSINDPHTITQMAVDIINNNPTQLQQYRGGKSRLEGFFVGQLMKQSGNRADPTLSQEIMSSLL 580          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_015173670.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Geitlerinema sp. PCC 7407] >AFY68106.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Geitlerinema sp. PCC 7407])

HSP 1 Score: 489.6 bits (1259), Expect = 1.400e-134
Identity = 254/506 (50.20%), Postives = 344/506 (67.98%), Query Frame = 0
Query:   87 VLERYEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL--------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAALK 585
            V  +YEA++G+E H QL ++TK +C+CST +    PN N+CPVC G PG LPV N  V+E   KA LAL C IA   ++DRK YFYPD PKNYQI+QY  P+   G LE+        P  K + ITRLH+EED+ K+VH GSD L+GSTHSLVD+NRAG+PL EIVSEPD+RSG EAAEY +EL++ +RY+GVSDGNM EGS+R DVN+SIRP G++A   KVE+KN+NSF ++Q+A+++E+ RQ  A +A EP+ QETR+W+E    T  MR+KEG SDYRYFPEPD+ P+ + PA +  W+SEL ELPA+KR RY+     GL A  T+ LT+D +VA ++E AV +  +  K+ A W++GDI  +LN   G       I LTPA LAE+V LI +G I+G                E+G       G+V AL++E+G+  I+DPAA+  ++++V+  NP ++  YR GKTK+ GFFVG V+K++  RADP++  +L    LK
Sbjct:    7 VKTQYEAIIGLETHCQLRTNTKIFCNCSTTFGA-PPNTNVCPVCLGMPGVLPVLNQTVLEYGVKAGLALNCAIAPFSKFDRKQYFYPDLPKNYQISQYDLPIAEHGWLEIELTDGEGNPVRKKIGITRLHMEEDAGKLVHGGSDRLSGSTHSLVDYNRAGVPLLEIVSEPDIRSGQEAAEYAQELRRTMRYLGVSDGNMQEGSLRCDVNISIRPVGQEAFGTKVEIKNMNSFNAIQRAIEYEIERQIAAVEAGEPILQETRLWEEGSQRTISMRIKEGSSDYRYFPEPDLTPIEVSPAQLEHWRSELPELPAQKRHRYESE--LGLSAYDTRVLTDDPDVAAYFEGAV-IAGSPIKQTANWVMGDIAAYLNSKPG--LSIRAIALTPAVLAEMVSLIEDGTISGKIAKEILPDLL-----EKG-------GSVKALIEEKGLVQISDPAALGAIIDEVLAENPTELEQYRNGKTKLQGFFVGQVMKKTSGRADPKLTNQLLGPKLK 494          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_054468605.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Planktothricoides sp. SR001] >KOR35110.1 glutamyl-tRNA amidotransferase [Planktothricoides sp. SR001])

HSP 1 Score: 487.3 bits (1253), Expect = 6.900e-134
Identity = 253/505 (50.10%), Postives = 342/505 (67.72%), Query Frame = 0
Query:   87 VLERYEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL--------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAAL 584
            V  +YEA++G+E H Q+ SDTK +C CST +    PN N+CPVC G PG LPV N RV+E A K  LAL C+IA   ++DRK YFYPD PKNYQI+QY  P+   G LE+         + K + ITRLH+EED+ K+VH GSD LAGSTHSLVDFNR G+PL EIVSEPD+RSGAEAAEYG+ELQ+++RY+GVSDGNM EGS+R DVN+SIRP G+K    KVE+KN+NSF ++Q+A+D+E+ RQ +A ++ E + QETR+W+E    T  MR KEG SDYRYFPEPD+ P+ +P   +  WKS+L ELPA KR RY+++   GL A  T+ LT+D +VA+++E  ++   ADAK AA W++GDI G+L   K  +    +I L PA L+EL+ LI  G I+G                    E     G+  ALV+ +G+  I+D  A+ +++ +V+ A+P ++A YR GK ++ GFFVG V+K+SG RADP++  +L    L
Sbjct:    7 VKTKYEAIIGLETHCQVKSDTKIFCHCSTEFG-TPPNTNVCPVCMGMPGVLPVLNERVLEYAVKTGLALNCQIAKYSKFDRKQYFYPDLPKNYQISQYDLPIAEHGYLEIELIDDDGNAARKKIGITRLHMEEDAGKLVHGGSDRLAGSTHSLVDFNRTGVPLMEIVSEPDIRSGAEAAEYGQELQRIVRYLGVSDGNMQEGSLRCDVNISIRPVGQKEFGVKVEIKNMNSFSAIQRAIDYEIERQIEALESGEKIFQETRLWEEGSQRTISMRSKEGSSDYRYFPEPDLGPIEIPAYQLEEWKSQLPELPAAKRHRYENN--IGLSAYDTRVLTDDRSVAEYFEATLQA-GADAKLAANWIMGDITGYLKNEKLTI---DQIALKPAELSELISLIQAGTISGKIAKDIL------------PELLTAGGSPKALVESKGLIQISDTGALEVMIAEVLAAHPDELAKYRGGKKQLKGFFVGQVIKKSGGRADPKLTNQLLSQQL 492          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_015157951.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Chamaesiphon minutus] >AFY91757.1 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit [Chamaesiphon minutus PCC 6605])

HSP 1 Score: 485.0 bits (1247), Expect = 3.400e-133
Identity = 247/497 (49.70%), Postives = 344/497 (69.22%), Query Frame = 0
Query:   90 RYEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL--------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRL 579
            +YEAV+G+E H QL + TK +C+CST +  +VPN NICPVCT  PG LPV N +V E A KA LAL C+IAA  ++DRK YFYPD PKNYQITQ+  P+   G +E+        P+ K + ITR+H+EED+ K+VH GSD L+GS++SLVD+NR G+PL EIVSEPD+RSG EAAEY +E+++++RY+GV DGNM EGS+R DVN+S+RP G +    KVE+KN+NSF ++Q+A+D+E+ RQ  A    EP+ QETR+W+E    T  MR KEG SDYRYFPEPD+ P+ L  +  AAWK+EL ELP +KR RYQ+    GL    T+ LT+D +VA++ E  +    AD K+AA W++GDI  +L   K  ++D   I LTP  LAEL+GLI +G I G              + E G       G+V AL++ +G+ +I+DPA +  +V++++ ANP ++  Y+AGKTK+LGFFVG ++K++G RA+P++A ++
Sbjct:   10 QYEAVIGLETHCQLNTATKIFCNCSTEFG-SVPNHNICPVCTAMPGVLPVLNEKVYEYAVKAGLALNCQIAAYSKFDRKQYFYPDLPKNYQITQFDLPIAEHGWVEIEILDDAGNPTRKKIGITRMHMEEDAGKLVHGGSDRLSGSSYSLVDYNRTGVPLCEIVSEPDLRSGIEAAEYAQEIRRIIRYLGVGDGNMQEGSLRCDVNISVRPVGREEFGVKVEIKNMNSFSAIQRAIDYEIDRQITAIGNNEPIFQETRLWEEGTQRTISMRSKEGSSDYRYFPEPDLTPMILADSQKAAWKAELPELPVEKRHRYQEE--LGLSPYDTRVLTDDRSVAEYLEATIAA-GADIKQAANWVMGDITAYLKNQKVSIRD---IPLTPTVLAELIGLIDKGTINGKIAKEILPD-----LFEHG-------GSVQALIESKGLTSISDPAELEKIVDELLAANPKELEQYKAGKTKLLGFFVGQLMKQTGGRAEPKLANQI 487          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_017718972.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Oscillatoria sp. PCC 10802])

HSP 1 Score: 480.7 bits (1236), Expect = 6.400e-132
Identity = 250/505 (49.50%), Postives = 339/505 (67.13%), Query Frame = 0
Query:   87 VLERYEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL--------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAAL 584
            V  +YEA++G+E H QL + TK +C+CST +    PN NICP+C G PG LPV N +V+E A KAALAL C+IA   ++DRK YFYPD PKNYQI+QY  P+   G LE+         + K + ITRLH+EED+ K+VH GSD L+GS +SLVDFNR G+PL EIVSEPD+RSGAEAAEY +EL+++LRY+GVSDGNM EGS+R DVN+S+RP GE+    KVE+KN+NSF ++Q+A+++E+ RQ +A +A E + QETR+W+E    T  MR KEG SDYRYFPEPD+P + +   L   WK++L ELPA KR RY+     GL A   + LT+D  VA+++E AV    A AK+AA W++GDI  +L  NK      G I LTPA L EL+ LI  G I+G                    E   + G+   LV+ +G+  I+D  A+  ++++V+ A+P ++  YRAGKTK+LGFFVG V+K++G RADP++  +L  + L
Sbjct:    7 VKTQYEAIIGLETHCQLSTATKIFCNCSTEFG-TPPNTNICPICMGMPGVLPVLNQKVLEYAVKAALALNCQIAPHSKFDRKQYFYPDLPKNYQISQYDLPIAKGGWLEIELVDDTSTATRKKIGITRLHMEEDAGKLVHAGSDRLSGSAYSLVDFNRTGVPLVEIVSEPDIRSGAEAAEYAQELRRILRYLGVSDGNMQEGSLRCDVNISVRPVGEEKFGTKVEIKNMNSFSAIQRAIEYEIDRQIQAIEAGERIVQETRLWEEGSQRTISMRSKEGSSDYRYFPEPDLPAVEVGAPLQQQWKAQLPELPASKRHRYESE--LGLSAYDARVLTDDRQVAEYFEAAV-AQGAGAKQAANWVMGDIAAYLKENK---LGIGDIALTPATLTELISLIEAGTISGKIAKDIL------------PELLAKGGSAQELVESKGLIQISDTGALEKIIDEVLAASPKELEQYRAGKTKLLGFFVGQVMKQTGGRADPKLTNQLLASKL 492          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_022606717.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Rubidibacter lacunae] >ERN41619.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit [Rubidibacter lacunae KORDI 51-2])

HSP 1 Score: 480.7 bits (1236), Expect = 6.400e-132
Identity = 255/507 (50.30%), Postives = 335/507 (66.07%), Query Frame = 0
Query:   87 VLERYEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL---------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAALK 585
            V   YEAV+G+E H QL + +K +CSCST +    PN N+CPVC G PG LPV N  V E + K  LAL CEIA   ++DRK YFYPD PK+YQI+QY  P+   G L +          + K + I RLH+EED+ K+VH GSD L+GSTHSLVD+NR G+PL EIVSEPD+R+G EAAEY +ELQ+ +RY+GV DGNM EGS+R DVNVS+RPKG      KVE+KN+NSF ++Q+A+D+E+ RQ KA ++ E + QETR+WDE +  T  MR KEG SDYRYFPEPD+PPL +    +  W +EL ELPAKKR RY  S   GL     + LT+D  VA+++E AV    ADAK+AA W+  D+  +LN NK  + D   I LTPA LAELV LIA+G I+G                E   E   E G+   LV+ +G+  I+DP+ +  +V++++ ANP KV  +R GKTK+ GFFVG ++K +G RADP++A ++  A LK
Sbjct:    7 VKTEYEAVIGLETHCQLNTASKIFCSCSTEFGA-PPNTNVCPVCLGYPGVLPVLNRSVYESSVKMGLALNCEIARYSKFDRKQYFYPDLPKSYQISQYDMPIAEHGHLTIELYDKQSGKATSKRIEIARLHMEEDAGKLVHVGSDRLSGSTHSLVDYNRGGVPLMEIVSEPDIRTGEEAAEYAQELQRTVRYLGVGDGNMQEGSLRCDVNVSVRPKGASKFGTKVEIKNMNSFSAIQKAIDYEIARQVKAIESGEDIVQETRLWDEGKQRTTSMRKKEGSSDYRYFPEPDIPPLEITTEQLDTWTAELPELPAKKRDRYAKS--LGLSVYDARVLTDDRLVAEYFETAVAA-GADAKQAANWVTQDVAAYLNNNKLAIAD---IALTPATLAELVQLIAKGTISGKI------------AKEILPELLTEGGSAEKLVESKGLTQISDPSELERVVDELLAANPDKVEQFRNGKTKLQGFFVGQMMKATGGRADPKLANKILTAKLK 494          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_045055976.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Aliterella atlantica] >KJH70561.1 glutamyl-tRNA amidotransferase [Aliterella atlantica CENA595])

HSP 1 Score: 480.3 bits (1235), Expect = 8.400e-132
Identity = 248/496 (50.00%), Postives = 333/496 (67.14%), Query Frame = 0
Query:   91 YEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL--------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRL 579
            YEAV+G+E H QL ++TK +C+CST +    PN NICP+C G PG LPV N RV+E A KA LAL C+IA   ++DRK YFYPD PKNYQI+QY  P+   G LE+        P  K + ITRLH+EED+ K+VH GSD L+GST+SLVDFNR G+PL EIVSEPDMRSG EAAEY +EL+++L Y+GVSDGNM EGS+R DVN+S+RP G++    KVE+KN+NSF ++Q+A+D+E+ RQ  A +A + +  ETR+W+E    T  MRVKEG SDYRYFPEPD+ P+ +  + +  W+SEL ELPA KR RY+      L A   + LT+D  VA+++EKA+    A+ K+AA W++GDI  +LN  K  + +   I L P  LAEL  LI +G I+G                        E G+   LV+ +G+  I+D  AI  +V++V+ ANP ++  YR+GKTK+LGFFVG VLK++G RADP++  +L
Sbjct:   11 YEAVIGLETHCQLKTNTKVFCNCSTEFG-TPPNTNICPICMGYPGVLPVLNQRVLEYAVKAGLALNCQIAPYSKFDRKQYFYPDLPKNYQISQYDLPIAEHGWLEIELVDADGNPIRKKIGITRLHMEEDAGKLVHAGSDRLSGSTYSLVDFNRTGVPLVEIVSEPDMRSGQEAAEYAQELRRILLYLGVSDGNMQEGSLRCDVNISVRPIGQQEFGTKVEIKNMNSFNAIQRAIDYEIERQIAAIEAGDRIVMETRLWEEGSQRTISMRVKEGSSDYRYFPEPDLAPIEVAKSQLEQWRSELPELPAAKRHRYETE--LNLSAYDARVLTDDKAVAEYFEKAI-ASGANPKQAANWVMGDIAAYLNNKKLSINE---IALNPETLAELTNLIEDGTISGKIAKDILPELLV------------EGGSAKELVERKGLIQISDTGAIEAIVDQVIAANPKELEQYRSGKTKLLGFFVGQVLKQTGGRADPKLTNQL 487          
BLAST of NO01G03520 vs. NCBI_GenBank
Match: WP_072621353.1 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Spirulina major])

HSP 1 Score: 478.0 bits (1229), Expect = 4.200e-131
Identity = 247/503 (49.11%), Postives = 338/503 (67.20%), Query Frame = 0
Query:   91 YEAVVGIEVHAQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASKAALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLEL---------PSGKMVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDMRSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRAKVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKLMRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSAGFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNGNKGKVKDFGKIKLTPAGLAELVGLIAEGKITGXXXXXXXXXXXXXWVGEEGKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAGKTKMLGFFVGMVLKESGSRADPEVAQRLTEAALK 585
            YEAV+G+E H QL + TK +   ST +    PN NI P+C G PG LPV N +V+E A K  LAL C+IA   ++DRK YFYPD PKNYQI+QY  P+   G LE+          + K + ITRLH+EED+ K+VH GSD L+GSTHSLVDFNRAG+PL EIVSEPD+R+GAEAAEYG+EL++++RY+G+SDGNM EGS+R DVN+SIRP G+K    K+E+KN+NSF ++Q+A+D+E+ RQ KA +A EP+ QETR+W+E    T  MR KEG SDYRYFPEPD+PP+ +    +  W+S+L ELPA KR RY+     GL     + LT+D  +  ++E A+ +  ADAK+ A WL+GDI G+LN  K  + D   + LTPA LAEL+ LI +G I+G              +            +V  LV+ +GM  I+D +AI +++++++ ANP KVA +RAGKTK+ GFF+G ++K++  RADP++  +L    LK
Sbjct:   10 YEAVIGLETHCQLNTKTKIFSPVSTEFGA-PPNTNISPICLGYPGVLPVLNEKVLESAVKTGLALNCQIAPYSKFDRKQYFYPDLPKNYQISQYDLPIAEHGWLEIELVDPVTKAATRKKIGITRLHMEEDAGKLVHAGSDRLSGSTHSLVDFNRAGVPLLEIVSEPDIRTGAEAAEYGQELRRIVRYLGISDGNMQEGSLRCDVNISIRPVGQKEFGTKIEIKNMNSFSAIQKAIDYEIERQTKALEAGEPLYQETRLWEEGSQRTISMRKKEGSSDYRYFPEPDLPPIEVSKEQLEQWRSQLPELPAAKRDRYE--TDLGLSPYDVRVLTDDHQMTAYFESAIAL-GADAKQIANWLMGDILGYLNSEKLTIAD---LALTPATLAELLQLIEDGTISGKIAKDILPELLTTPI-----------DSVAKLVESKGMTQISDLSAIEVMIDELIAANPDKVAQFRAGKTKIQGFFMGQIMKQTSGRADPKLTNQLLVKKLK 494          
The following BLAST results are available for this feature:
BLAST of NO01G03520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29278.16.300e-18878.65aspartyl glutamyl-trna amidotransferase subunit b ... [more]
CBN78448.12.000e-17062.55glutamyl-tRNA(Gln) amidotransferase, B subunit [Ec... [more]
CEM39017.11.300e-14554.39unnamed protein product [Vitrella brassicaformis C... [more]
WP_015173670.11.400e-13450.20Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
WP_054468605.16.900e-13450.10Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
WP_015157951.13.400e-13349.70Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
WP_017718972.16.400e-13249.50Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
WP_022606717.16.400e-13250.30Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
WP_045055976.18.400e-13250.00Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
WP_072621353.14.200e-13149.11Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007959NSK007959Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03520.1NO01G03520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577089gene_353Nannochloropsis oceanica (N. oceanica CCMP1779)gene
gatBgene1343Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03520.1NO01G03520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03520 ID=NO01G03520|Name=NO01G03520|organism=Nannochloropsis oceanica|type=gene|length=2151bp
ATGGACACGAGCTGCCCCCCTCAAAGAAAAAGGCCTCGGCCGGCGCAGCC
TCTCCTCTGCACTTCACTCCGGCGCCTCGTGTTTGTTGCTGCCGCGGCTG
TGGCCGCCACTGCGGCCACGACAGCACACGCTTTCGTCGTGCCAAGCAGC
AGAGGCATTAATGGTGCCGCCATTTGGCGTGGGCGCACGGTGTACATGGG
CAAGGGCAGTGGTGGGGGCGGAGGAAGCAAGAAAAAGGGGTCCGCGCTGC
TGCAAGAGgtgcgtagcacgcgcgtgcgtgtgtgagtgtgtgtttgaggg
cacctagcatgtgctccttctccccctctctatttctttcctcgaaaaca
acgttgatagtgcagcactgtctgcctccgcgttcgtgtgagtgagtgac
caaccccttactggaactcacaacctcctccccctccctccatccctctt
cccgccataccctctcaccagGTCCTCGAACGCTACGAAGCTGTCGTCGG
CATCGAAGTTCATGCGCAGCTCCTCTCGGACACCAAAGCCTACTGCAGTT
GCTCCACTCATTACAATCCCAACGTGCCCAACGCCAACATCTGCCCAGTC
TGCACGGGCGAGCCCGGCACGTTGCCGGTGCCCAACGCCCGTGTAGTCGA
ATTAGCCAGCAAGGCCGCTCTGGCCCTTCAATGCGAAATAGCTGCAGAAG
TCCGTTATGACCGCAAAAATTATTTCTACCCCGATACGCCCAAAAACTAC
CAAATCACACAATACACTCACCCACTGGGTGGGAAAGGTTTGCTGGAGCT
CCCAAGTGGGAAAATGGTGGCCATCACCCGTTTACACATTGAAGAAGACT
CGGCAAAGATGGTCCATCAAGGGTCGGACTCCTTGGCGGGCTCGACACAT
TCCCTTGTCGATTTTAATAGGGCCGGGATTCCTCTAGCGGAGATCGTGTC
TGAGCCAGACATGCGTTCAGGGGCGGAAGCAGCCGAGTATGGGAGGGAGT
TGCAGAAGGTCCTGCGATACGTAGGAGTAAGTGATGGGAACATGGCTGAG
GGCTCGATGCGCCTTGACGTGAATGTGTCGATTCGACCCAAGGGGGAAAA
GGCCCTGAGGGCTAAGGTGGAGGTGAAGAATGTGAACTCGTTCAAGTCCG
TGCAGCAAGCGGTGGACTTCGAAGTGTTGCGGCAGGCCAAAGCCTACGAT
GCTGCAGAGCCCGTGAGGCAGGAAACGCGCATGTGGGACGAGAAAGAGCT
ATCGACCAAGCTCATGCGAGTTAAAGAAGGCGAATCCGACTATCGCTACT
TTCCCGAACCGGACGTCCCCCCTCTCACCCTCCCCCCCGCCCTCGTCGCG
GCCTGGAAGAGCGAATTGCAGGAGCTGCCGGCGAAGAAGCGTGCGCGGTA
CCAGGATTCAGCGGGTTTTGGGTTGGATGCAGgtgcgaaggggaagaagg
gagaaagggagggagggagggacggagaaaggaagggaagatggatgggt
ggaaaggccgtcgaaaggaaatttcatcatcgttttatttttttgtcgta
gtcactcagttactccctccttccctccctctcgcccactattccggttc
tcacagAAACGACCAAGGCGTTAACGGAAGATTTGAACGTGGCGCAATTT
TACGAAAAAGCCGTTGAGGTCCACAAGGCAGACGCCAAGGAAGCAGCCAA
ATGGTTGATAGGTGATATTTTCGGGCACTTGAATGGAAATAAAGGGAAGG
TTAAGGACTTTGGCAAGATTAAGTTGACCCCTGCGGGCCTGGCAGAGCTG
GTCGGGCTGATCGCTGAAGGGAAGATTACCGGGAAGATAGCTAAGGAGCT
CCTGCCGGAGTTGTTGGATGAGTGGGTTGGGGAGGAAGGAAAAGAGGGGG
AGGGGGAGGCAGGGGCGGTGTTGGCCTTGGTGAAGGAGAGGGGGATGGAG
GCCATTACGGACCCAGCGGCGATTGCGCTGTTGGTTGAAAAGGTGATGCA
GGCGAATCCAGGGAAGGTCGCTGATTATAGGGCCGGGAAGACCAAGATGC
TAGGTTTTTTTGTGGGGATGGTGTTGAAGGAGAGTGGGAGTAGAGCTGAT
CCGGAGGTGGCACAGAGGTTGACGGAAGCAGCGTTGAAGGACGGGATATA
G
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protein sequence of NO01G03520.1

>NO01G03520.1-protein ID=NO01G03520.1-protein|Name=NO01G03520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MDTSCPPQRKRPRPAQPLLCTSLRRLVFVAAAAVAATAATTAHAFVVPSS
RGINGAAIWRGRTVYMGKGSGGGGGSKKKGSALLQEVLERYEAVVGIEVH
AQLLSDTKAYCSCSTHYNPNVPNANICPVCTGEPGTLPVPNARVVELASK
AALALQCEIAAEVRYDRKNYFYPDTPKNYQITQYTHPLGGKGLLELPSGK
MVAITRLHIEEDSAKMVHQGSDSLAGSTHSLVDFNRAGIPLAEIVSEPDM
RSGAEAAEYGRELQKVLRYVGVSDGNMAEGSMRLDVNVSIRPKGEKALRA
KVEVKNVNSFKSVQQAVDFEVLRQAKAYDAAEPVRQETRMWDEKELSTKL
MRVKEGESDYRYFPEPDVPPLTLPPALVAAWKSELQELPAKKRARYQDSA
GFGLDAETTKALTEDLNVAQFYEKAVEVHKADAKEAAKWLIGDIFGHLNG
NKGKVKDFGKIKLTPAGLAELVGLIAEGKITGKIAKELLPELLDEWVGEE
GKEGEGEAGAVLALVKERGMEAITDPAAIALLVEKVMQANPGKVADYRAG
KTKMLGFFVGMVLKESGSRADPEVAQRLTEAALKDGI*
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Synonyms
Publications