NO01G03440, NO01G03440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03440 vs. NCBI_GenBank
Match: EWM29288.1 (hypothetical protein Naga_100029g26 [Nannochloropsis gaditana]) HSP 1 Score: 391.0 bits (1003), Expect = 3.300e-105 Identity = 203/268 (75.75%), Postives = 226/268 (84.33%), Query Frame = 0 Query: 20 AFVLPKPLSLATTATRQQAQLQQGCKTASVQGMGLARALTVLRDAEQSGEKAVGTDVPFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGVENGELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEPKQEEAETEAASTPASA 288 AFV+P S + + A+ Q ++ + RALTVLR+++Q G+ VGTDVPFELRGFSLATV L +G LITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADR++E K+TP IQK+KKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYL QGVENGEL FSMVFKSDDTPYRLWVEPERIARY+ FFGPGVW+TVEKVDAERRLVAIKL+TGERP S A+ + E E+ A + PASA Sbjct: 47 AFVIPAAKSSSLVNRQYHARYGQQRGVINLDKLAKTRALTVLRESQQGGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVENGELAFSMVFKSDDTPYRLWVEPERIARYETFFGPGVWATVEKVDAERRLVAIKLVTGERPAS-AQASRPEGESAAPAEPASA 313
BLAST of NO01G03440 vs. NCBI_GenBank
Match: XP_002183156.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45374.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 241.1 bits (614), Expect = 4.200e-60 Identity = 120/213 (56.34%), Postives = 160/213 (75.12%), Query Frame = 0 Query: 77 PFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGL--SGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQG-VENGELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEPKQEEAETEAASTPAS 287 PFE+RGFSL + + G LIT S AEYL SG +GL SG+GFVYGIP+ L G +L+YA++NPVPV +TP A+RV++ KAT I K+K+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQLQ L+Q V +GEL F+MV++S DTPY++W +P R+ +Y+KFFGPGV++ V K+DAE+RLV I+L TG R P EE +T ++ P + Sbjct: 84 PFEIRGFSLGNLVVGAGILITFASFAEYLSESGGDGLNVSGLGFVYGIPVFLAGAALKYAEINPVPVATTPAAERVFDRKATDTILKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLQELRQDEVNDGELAFTMVWQSVDTPYKMWADPRRVLKYEKFFGPGVYADVVKIDAEQRLVGIRLTTGTR------PPVEEQDTSTSAPPVA 290
BLAST of NO01G03440 vs. NCBI_GenBank
Match: CEM02223.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 233.0 bits (593), Expect = 1.100e-57 Identity = 116/219 (52.97%), Postives = 155/219 (70.78%), Query Frame = 0 Query: 67 SGEKAVGTDVPFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGL-VMPNKEFPQLQYLKQGVE-NGELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEPKQEEAETEAAST 284 SG + + P ++RGFSLA L G +IT+ S E+ G GL +GF+YG+PILLIG++LQYA+L P PV +T EADR+++AKAT I+K+K+DVTRHRYGDDAHLDTTV++LGL P KE PQLQY++QGV +GEL F MV+KS+ TP+R+W + R+ ++D++FGPGVW+ KVD RLV IKL TGER +P + E E +T Sbjct: 7 SGGFSTKGEPPIQIRGFSLAKATLLAGSVITLASFWEFFGQKGGSGLGSLGFIYGVPILLIGVALQYAELEPCPVRTTSEADRMFDAKATETIKKIKEDVTRHRYGDDAHLDTTVESLGLWPNPEKEPPQLQYIQQGVSPDGELEFMMVWKSETTPFRMWCDVNRVLKFDRYFGPGVWAQTVKVDGPNRLVGIKLTTGERKAPPVDPLADVTEQEIKAT 225
BLAST of NO01G03440 vs. NCBI_GenBank
Match: CBJ33716.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 231.9 bits (590), Expect = 2.500e-57 Identity = 120/213 (56.34%), Postives = 152/213 (71.36%), Query Frame = 0 Query: 72 VGTDVPFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGVE-NGELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLIT---GERP-ESAAEPKQEEAETE 280 V + PFE+RGFSLA G IT S EY + G+ GLSG+GFVYGIPI LIGL+L+YA+L P P+++TPEA+ ++E KAT I+ +K DVTRHRYGD+AHLDTTV+ LGLVMP ++PQLQY+ Q +E NGEL F+MVF+S TP++ WVEPER+ +Y FFGPGV + V KVDA+ +LVAIKL T G +P P EE E Sbjct: 89 VSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPKVTAPPAEETVAE 301
BLAST of NO01G03440 vs. NCBI_GenBank
Match: XP_002289747.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93284.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 215.7 bits (548), Expect = 1.900e-52 Identity = 114/210 (54.29%), Postives = 152/210 (72.38%), Query Frame = 0 Query: 77 PFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGL--SGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGV-ENGELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEPKQEEAETEAAST 284 PFE+RGFSL G +T+ S AEYL SSG +GL SG+GFVYGIPI L G +L+YA+++PVP S+ AD +E+KAT II+K+K+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQL L+Q V + G+L F+MV++S DTPY++W + +R RY+ FFGPGV + V K+DAE+RLV I+L TG + E + E EA +T Sbjct: 76 PFEIRGFSLGNFITIAGIAVTVLSFAEYLSSSGGDGLNVSGLGFVYGIPITLAGAALKYAEIDPVPCISSSAADAAFESKATEIIKKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLMELRQDVTDGGDLAFTMVWQSLDTPYKMWADEKRRKRYETFFGPGVGAEVVKIDAEQRLVGIRLTTG--GPLSEEYLASKVEKEAVAT 283
BLAST of NO01G03440 vs. NCBI_GenBank
Match: OEU19444.1 (hypothetical protein FRACYDRAFT_162891, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 212.6 bits (540), Expect = 1.600e-51 Identity = 102/180 (56.67%), Postives = 137/180 (76.11%), Query Frame = 0 Query: 82 GFSLATVGLALGGLITIGSLAEYLISSGSEGL--SGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGVENGELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKL 260 GFSL + + G +IT+ S AEYL S EGL SG+GFVYGIP+ L G +L+YA++NPVP+ + P +RVYEAK T I K+K+DVTRHRYGD+AHLDTTV+ LGLV+P K++PQLQ L+ +GEL F+MV++S DTPY++W + R+ +Y+ FFGPGV + V K+DAE+RLV I+L Sbjct: 1 GFSLGNLVILSGVVITVLSFAEYLSDSSGEGLNVSGLGFVYGIPVCLAGAALKYAEINPVPLITNPAGERVYEAKKTETIDKIKQDVTRHRYGDEAHLDTTVRKLGLVVPGKDYPQLQELRAEDADGELAFTMVWQSIDTPYKMWADERRVKKYETFFGPGVTAEVVKIDAEQRLVGIRL 180
BLAST of NO01G03440 vs. NCBI_GenBank
Match: GAX16429.1 (hypothetical protein FisN_19Lh005 [Fistulifera solaris]) HSP 1 Score: 211.8 bits (538), Expect = 2.700e-51 Identity = 108/201 (53.73%), Postives = 147/201 (73.13%), Query Frame = 0 Query: 77 PFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGV-ENG-ELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEPKQEE 276 PFE+RGFSL + LG LITI S AEYL + +SG+GFVYGIPI L G +L+YA++ PVP + P+A+ ++E KAT ++K+K+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQL+ L++ V ENG +L F+MV++S DTPY++W + R+ +Y+ FFGPGV + V KVDAE+RLV I+L T P E +E Sbjct: 28 PFEIRGFSLGNSVIGLGLLITIASFAEYL-AQDEGSMSGLGFVYGIPIFLAGSALKYAEIEPVPAFTQPKAEGLFEKKATETMRKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLRELREEVAENGVDLAFTMVWQSLDTPYKMWADERRVKKYETFFGPGVTAEVVKVDAEQRLVGIRLTTTTAPAPLKEAAPQE 227
BLAST of NO01G03440 vs. NCBI_GenBank
Match: GAX19435.1 (hypothetical protein FisN_19Hh005 [Fistulifera solaris]) HSP 1 Score: 210.7 bits (535), Expect = 6.100e-51 Identity = 106/202 (52.48%), Postives = 145/202 (71.78%), Query Frame = 0 Query: 77 PFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGVENG--ELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEPKQEEA 277 PFE+RGFSL + LG LITI S AEYL + +SG+GFVYGIPI L G +L+YA++ PVP + P+A+ ++E KAT ++K+K+DVTRHRYGD+AHLDTTV+ LGLV+P K +PQL+ L++ V +L F+MV++S DTPY++W + R+ +Y+ FFGPGV + V KVDAE+RLV I+L T P E +EA Sbjct: 28 PFEIRGFSLGNSVIGLGLLITIASFAEYL-AQDEGSMSGLGFVYGIPIFLAGSALKYAEIEPVPAFTQPKAEGLFEKKATETMRKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLRELREEVAENRVDLAFTMVWQSLDTPYKMWADERRVKKYETFFGPGVTAEVVKVDAEQRLVGIRLTTTTAPAPMKESAPQEA 228
BLAST of NO01G03440 vs. NCBI_GenBank
Match: XP_005829620.1 (hypothetical protein GUITHDRAFT_111319 [Guillardia theta CCMP2712] >EKX42640.1 hypothetical protein GUITHDRAFT_111319 [Guillardia theta CCMP2712]) HSP 1 Score: 183.7 bits (465), Expect = 7.900e-43 Identity = 95/188 (50.53%), Postives = 130/188 (69.15%), Query Frame = 0 Query: 79 ELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGVENGELTFSMVFKSDDTPY--RLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGER 265 ++RGFSLA + L LG IT+ S +Y + S L+ +GFVYG+PI L G +L+YA++ PV V++ + ++ KA I++KV+ DVTRHRYGDDAHLD++++ LGLV+ K FPQ+Q + E GEL F+MVF+S DTPY + W +P R+ RY+ FFG V + V KV E RLVAIKL TGER Sbjct: 84 QIRGFSLANLTLGLGIFITLFSFYQYFTNQNS--LTSLGFVYGLPIALGGFALKYAEILPVDVDTDERGEAIFAEKANEILRKVRADVTRHRYGDDAHLDSSLEKLGLVVEGKGFPQMQKIVIKNEGGELAFTMVFQSKDTPYKGKTWADPVRVKRYETFFGGDVNAEVIKVSKEERLVAIKLTTGER 269
BLAST of NO01G03440 vs. NCBI_GenBank
Match: OSX74706.1 (hypothetical protein BU14_0271s0001 [Porphyra umbilicalis]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 102/264 (38.64%), Postives = 144/264 (54.55%), Query Frame = 0 Query: 20 AFVLPKPLSLATTATRQQAQL--QQGCKTASVQGMGLARAL---------TVLRDAEQSGEKAVGTDVPFELRGFSLATVGLALGGLITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVESTPEADRVYEAKATPIIQKVKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLKQGVEN-GELTFSMVFKSDDTPYRLWVEPERIARYDKFFGPGVWSTVEKVDAERRLVAIKLITGERPESAAEP 272 AFV P++ A A A +QG + ++ RA T A + ++PFE+RGFSLA VGL G IT S Y S+G+ + +GFVYG+P+LLIG +L+YA+L PVP+ STP EA AT I +K+ DVTRHRYGD+AHL ++AL LV P+L + + GE ++ F S +TPY+ W + R ++FFGP + + V K+D E+RLV +KLI+ + A EP Sbjct: 2 AFVSAVPVARAPAAVASSAACTWRQGSRLSATAPPTFRRATLAATPVRRRTATPTAAAESDAVQEKEIPFEIRGFSLANVGLLFGFAITGYSFVTYFASNGTASATSLGFVYGVPVLLIGCALKYAELQPVPLTSTPAGLAAREATATDIQKKIVSDVTRHRYGDEAHLAAALRALSLVPRGAAAPELMRAAETTSDAGEYVLALEFFSKETPYKTWADVRE--RCERFFGPDIRAEVTKLDGEKRLVELKLISTRK---AGEP 260 The following BLAST results are available for this feature:
BLAST of NO01G03440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03440 ID=NO01G03440|Name=NO01G03440|organism=Nannochloropsis oceanica|type=gene|length=5201bpback to top protein sequence of NO01G03440.1 >NO01G03440.1-protein ID=NO01G03440.1-protein|Name=NO01G03440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=288bpback to top Synonyms
Publications
|