NO01G03410, NO01G03410 (gene) Nannochloropsis oceanica

Overview
NameNO01G03410
Unique NameNO01G03410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3114
Alignment locationchr1:891593..894706 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:891593..894706 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO01G03410 vs. NCBI_GenBank
Match: EWM29258.1 (mitochondrial carrier [Nannochloropsis gaditana])

HSP 1 Score: 526.2 bits (1354), Expect = 8.900e-146
Identity = 270/325 (83.08%), Postives = 288/325 (88.62%), Query Frame = 0
Query:   54 PGSFRSKTMMKLLRLPLAVAVLALASCWLGEGVHALKPVPSKTAVKTIPPPPARKADVSHKLNTFDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPAGLSIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYE 379
            P   R+ TM  L R  L + VLAL +  L   V AL   P+K ++K IP P ARKADV+HKLNT DMMIAGG ATA+GDLAMHPIDTIKTVQQAAPAGLSI KAC KILK+MGPIGFYAGVVPY TMDGLSGAIKFATYEWGKKLVAP+LP ALHAYSHFVCAAGAF+SCSVVMVPGEL+KQRLQAGVVP+MV GIKQ+WKTEGLPGFF GYKATLIRDVPYTMLELGLYENFKTL+KKYRKREELTT EEL AAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYK EGG+++FMSGSSARVLWLLPFTVIHLG YE
Sbjct:   71 PSFARTMTMTGLHRPLLLLIVLALYA--LENQVRALPAAPAK-SLKVIPAPSARKADVTHKLNTIDMMIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYE 392          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_005820164.1 (hypothetical protein GUITHDRAFT_120626 [Guillardia theta CCMP2712] >EKX33184.1 hypothetical protein GUITHDRAFT_120626 [Guillardia theta CCMP2712])

HSP 1 Score: 257.7 bits (657), Expect = 5.900e-65
Identity = 141/272 (51.84%), Postives = 188/272 (69.12%), Query Frame = 0
Query:  122 IAGGFATAMGDLAMHPIDTIKTVQQAAPAG---LSIVKACGKILKDMGPI-GFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKRE--ELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMT-GTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILAD 387
            IAGG ATA+GDLA+HPIDTIKTVQQ+A AG    SI  AC KI+++ G + GFYAGV PYVT D L+G +KFA YE  K +    +   L  ++HF+ AA AFI+CSVV+VPGEL+KQ+LQAG+  S+      I K  G  GFF GYKAT++RDVPYTMLELGLY+N K+L+  +RK+E    + ++++ AAA  GG+ G +TNPLD++KTR+MT G+       VV  + K + G   F +GS ARV WL+PFT I+L  Y++ K  + +
Sbjct:   38 IAGGIATAVGDLALHPIDTIKTVQQSAAAGSPSASIFGACSKIMREGGGLGGFYAGVGPYVTFDSLAGCVKFAAYEVCKTIADQHVDENLKPFTHFLSAAVAFIACSVVLVPGELMKQQLQAGMYRSVRACAAGILKKNGPRGFFQGYKATVVRDVPYTMLELGLYDNIKSLISHFRKKEGNANSKVDDVLAAAAVGGITGWITNPLDIIKTRMMTSGSAAPRVKTVVMDIIKKD-GPRTFFAGSIARVSWLMPFTAIYLPTYDLVKSAIKE 308          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_005704201.1 (mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria] >EME27681.1 mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria])

HSP 1 Score: 209.9 bits (533), Expect = 1.400e-50
Identity = 116/288 (40.28%), Postives = 163/288 (56.60%), Query Frame = 0
Query:  118 FDMMIAGGFATAMGDLAMHPIDTIKTVQQ-------AAPAGLSI----------VKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILADLK 389
            +D + AG  AT+     MHP+DTIKT+ Q       +  A LS+          +   G++ +  G  GFY G+   V     +GAIKFA Y   K+    +  P   ++  F CAA AFI+CSVV+VPGE++KQRLQ+G+  SM  G+ + W+  G+ GF+ GY ATL+RD+PYTMLE GLYE FK L +   K++ L    E     + GG  G LT P D++KT LMTG    G + +   + + + G++    G   RVLWL+PFT +  GV+E SKR +  LK
Sbjct:   11 WDHLFAGAIATSAAVSTMHPMDTIKTILQHSQGKNPSFKADLSVDSVLHSRSSALTVAGQLFRKRGISGFYQGLGANVGAQTPAGAIKFAVYGILKQKSERVFDPKWRSFVEFGCAALAFIACSVVLVPGEVVKQRLQSGMYSSMRAGVVETWRARGISGFYAGYGATLLRDIPYTMLEFGLYEQFKRLFRGSYKKDILPPHIEWFLGGLAGGCTGFLTTPFDVLKTHLMTGQHSQGIWPLFHNIVQRD-GLSGLFCGGLTRVLWLIPFTAVFFGVHEASKRAMIGLK 297          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_005537186.1 (similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D] >BAM81150.1 similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 209.1 bits (531), Expect = 2.400e-50
Identity = 122/291 (41.92%), Postives = 171/291 (58.76%), Query Frame = 0
Query:  110 DVSHKLNTFDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPAGL---------SIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKK-LVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMT--GTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILADLK 389
            D    L  ++ ++AGG AT      MHP+DTIK   Q A             +++ A  +IL   GP GFYAG+   ++    +GAIKFATYE  K+  V   LP A   +     AA AF++CSVV+VPGE++K RLQAG+ PS    + +I + +G+ G + GY AT+ RDVPYTMLE GLYE FK       KR+ L + EE +   + GG+ G  T PLD++KT+LMT   +QY G++D  + ++  E G++ F +G  ARVLWL+PFT +  G +E+ KR L   K
Sbjct:    3 DEKGDLCLWEHLVAGGGATLSAVSVMHPLDTIKIYMQRAQVATAGGSANVRPTMLGAAQEILAQRGPGGFYAGLGANLSGQVPAGAIKFATYELLKQHAVQKRLPAAAQGWGEVASAALAFLACSVVLVPGEVVKSRLQAGLYPSFREALLRIIEQDGVSGLYRGYWATVTRDVPYTMLEFGLYEQFKRACMWSVKRDRLHSSEEWTMGGLAGGVTGWCTTPLDVIKTKLMTCARSQYRGYWDAARDVWHRE-GLSGFFTGGLARVLWLVPFTAVFFGSHEIIKRFLRSRK 292          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: GAX11319.1 (hypothetical protein FisN_15Lh249 [Fistulifera solaris])

HSP 1 Score: 191.0 bits (484), Expect = 6.800e-45
Identity = 112/271 (41.33%), Postives = 160/271 (59.04%), Query Frame = 0
Query:  120 MMIAGGFATAMGDLAMHPIDTIKTVQQAA---PAGL--SIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKMEG-GVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRIL 385
            + +AG   T + D+ +HP+D IKT+QQ+      GL  ++  A   +    G  GFY G + Y   D L+GA KFAT+EW K+        A+ +   FV A  AF+S S+ +VPGEL+KQ+LQ G+ P     ++ I    G+ GFF GY AT  RDVPYTMLELG+YE    LLKK    E+ +TL E+ AA++TG +   LT P+D +KT+LMT  +   ++D    M+ +E  GV    SG  AR+ W++PF  I+L +Y+  KR+L
Sbjct:   75 LALAGAVTTFVADVMIHPMDCIKTLQQSDLGWELGLHKNVGDAAQYLWATSGLSGFYHGFLVYAGSDALAGAAKFATWEWWKR--------AMPSTVLFVGAGIAFLSSSLFLVPGELVKQQLQMGLYPDFSAAVQGIAGMAGVEGFFVGYDATCYRDVPYTMLELGVYE----LLKKAFDNEKKSTLREVGAASITGAIAAFLTTPMDTIKTKLMTSEETYNYWDCA--MHTLESHGVEGLFSGMEARISWIVPFVCIYLPLYDNIKRLL 331          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: GAX12770.1 (hypothetical protein FisN_15Hh249 [Fistulifera solaris])

HSP 1 Score: 186.4 bits (472), Expect = 1.700e-43
Identity = 110/271 (40.59%), Postives = 156/271 (57.56%), Query Frame = 0
Query:  120 MMIAGGFATAMGDLAMHPIDTIKTVQQAA---PAGL--SIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKK-LVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRIL 385
            + +AG   T + D+ +HP+D IKT+QQ+      GL  S+  A   +    G  GFY G + Y   D L+GA KFAT+EW K+ + + IL         FV A  AF+S S+ +VPGEL+KQ+LQ G+ P     ++ I  + G+ GF  GY AT  RDVPYTMLELG+YE    LLKK    E  +TL E+ AA++TG +   LT P+D +KT+LM   +   ++D      +   GV    SG  AR+ W++PF  I+L +Y+  KR+L
Sbjct:   75 LALAGAVTTFVADVMIHPMDCIKTLQQSDLGWELGLHNSLGDAAQYLWTTSGLAGFYHGFLVYAGSDALAGAAKFATWEWWKRNMPSTIL---------FVGAGIAFLSSSLFLVPGELVKQQLQMGLYPDFSAAVQGIAGSAGVEGFLVGYDATCYRDVPYTMLELGVYE----LLKKAFDNESKSTLREVGAASITGAIAAFLTTPMDTIKTKLMLSEESCNYWDCAMNTLESH-GVEGLFSGMEARISWIVPFVCIYLPLYDNIKRLL 331          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_002185480.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42967.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 181.0 bits (458), Expect = 7.100e-42
Identity = 110/296 (37.16%), Postives = 162/296 (54.73%), Query Frame = 0
Query:  112 SHKLNTFDMMIAGGFATAMGDLAMHPIDTIKTVQQA-APAGLSIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYE-WGKKLVAPI---------------LPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREE---LTTLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTG--FFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILA 386
            S  L  + + +AG  AT + D   HP+D IKT+QQ+ A  GLS+V A   +    G + FY G + Y   D + GAIKF  +E W + + + +               +PP L        AA A I+ SVV VPGE +KQ+LQ G   S+   ++ ++ T GLPGFF GY   + RD+P+TMLELGLY+ FK ++++ R   +       E++ AAA TG +  ++T PLD +KT+LM    Y G  FFD      + + GV +  +G  AR+ W+ P T I+L  Y++ KR+ A
Sbjct:   96 SSSLPLWHLALAGSLATLLADSLTHPVDCIKTIQQSDAGMGLSLVAAASYLWSSAGIVAFYQGFLTYGCTDAVGGAIKFTVFESWNRAIASSVGADRRNESLRDRLDTIPPVL---IRAAGAAMALIASSVVTVPGEFVKQQLQVGHYSSLSEALQSVYLTSGLPGFFHGYDGVVYRDIPFTMLELGLYDAFKNMVRQTRSSTDPGPPAAWEDVVAAAATGCVAAVVTTPLDTIKTKLMV-DDYGGASFFDCFASTVE-QHGVWSLFAGLLARIAWIGPSTAIYLPTYDLLKRLFA 386          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_011100076.1 (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform X2 [Sesamum indicum])

HSP 1 Score: 155.2 bits (391), Expect = 4.100e-34
Identity = 105/279 (37.63%), Postives = 146/279 (52.33%), Query Frame = 0
Query:  118 FDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPAGLSIVKACGKILKDM--GPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLM---TGTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILADLKPTD 392
            F+ +IAGG A  + + A++PIDTIKT  QAA  G  I      ILK +  G  G  AGV+P       + A+    YE  K+ +   LP  L A +H        I+ S + VP E++KQR+Q G   S    ++ I   EG  G + GY + L+RD+P+  ++  LYE  +   K   KR +L   E     A  G L G +T PLD++KTRLM   +  QY GFFD VQ + + E G +A + G   RVLW+     I  GV E +KR LA+ +P D
Sbjct:   54 FEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGGKI------ILKGLYSGLAGNLAGVLP-------ASAVFIGVYEPAKQQLLRNLPENLSAVAHLTAGVLGGIASSFIRVPTEVVKQRMQTGQFTSASDAVRLIASKEGFKGLYAGYGSFLLRDLPFDAIQFCLYEQLRIGYKLAAKR-DLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGFFDCVQTIVR-EEGPSALLKGVGPRVLWIGIGGSIFFGVLERTKRFLAERRPND 317          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_008232365.1 (PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial [Prunus mume])

HSP 1 Score: 154.8 bits (390), Expect = 5.400e-34
Identity = 106/278 (38.13%), Postives = 145/278 (52.16%), Query Frame = 0
Query:  118 FDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPAGLSIVKACGKILKDM--GPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLM---TGTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILADLKPT 391
            F+ +IAGG A  + + A++PIDTIKT  QAA  G  IV      LK +  G  G  AGV+P       + AI    YE  K+ +  + P  L A +HF   A   ++ S+V VP E++KQR+Q G   S    ++ I   EG  GF+ GY + L+RD+P+  ++  LYE  +   K   KR EL   E     A  G L G  T PLD++KTRLM   +  QY G  D VQ + + E G  A + G   RVLW+     I  GV E +KR L+  +PT
Sbjct:   54 FEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGGKIV------LKGLYSGLAGNLAGVLP-------ASAIFVGVYEPTKQKLLKMFPENLSALAHFTAGAFGGVAASLVRVPTEVVKQRMQTGQFTSASDAVRLIASKEGFKGFYAGYGSLLLRDLPFDAIQFCLYEQLRLGYKAAAKR-ELNDPENAIIGAFAGALTGAATTPLDVIKTRLMVQGSANQYKGIIDCVQTIVR-EEGPPALLKGIGPRVLWIGIGGSIFFGVLERTKRFLSQRRPT 316          
BLAST of NO01G03410 vs. NCBI_GenBank
Match: XP_007205556.1 (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform X2 [Prunus persica] >XP_020420636.1 S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform X2 [Prunus persica] >ONI01938.1 hypothetical protein PRUPE_6G168500 [Prunus persica] >ONI01939.1 hypothetical protein PRUPE_6G168500 [Prunus persica] >ONI01940.1 hypothetical protein PRUPE_6G168500 [Prunus persica])

HSP 1 Score: 154.5 bits (389), Expect = 7.100e-34
Identity = 106/278 (38.13%), Postives = 145/278 (52.16%), Query Frame = 0
Query:  118 FDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPAGLSIVKACGKILKDM--GPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVAPILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIKQIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELTTLEELSAAAVTGGLVGLLTNPLDLVKTRLM---TGTQYTGFFDVVQKMYKMEGGVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILADLKPT 391
            F+ +IAGG A  + + A++PIDTIKT  QAA  G  IV      LK +  G  G  AGV+P       + AI    YE  K+ +  + P  L A +HF   A   ++ S+V VP E++KQR+Q G   S    ++ I   EG  GF+ GY + L+RD+P+  ++  LYE  +   K   KR EL   E     A  G L G  T PLD++KTRLM   +  QY G  D VQ + + E G  A + G   RVLW+     I  GV E +KR L+  +PT
Sbjct:   54 FEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGGKIV------LKGLYSGLAGNLAGVLP-------ASAIFVGVYEPTKQKLLKMFPENLSALAHFTAGAFGGVAASLVRVPTEVVKQRMQTGQFTSASDAVRLIASKEGFKGFYAGYGSFLLRDLPFDAIQFCLYEQLRLGYKAAAKR-ELNDPENAIIGAFAGALTGAATTPLDVIKTRLMVQGSANQYKGIIDCVQTIVR-EEGPPALLKGIGPRVLWIGIGGSIFFGVLERTKRFLSQRRPT 316          
The following BLAST results are available for this feature:
BLAST of NO01G03410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29258.18.900e-14683.08mitochondrial carrier [Nannochloropsis gaditana][more]
XP_005820164.15.900e-6551.84hypothetical protein GUITHDRAFT_120626 [Guillardia... [more]
XP_005704201.11.400e-5040.28mitochondrial carrier (BOU / S-adenosylmethionine ... [more]
XP_005537186.12.400e-5041.92similar to mitochondrial carrier protein [Cyanidio... [more]
GAX11319.16.800e-4541.33hypothetical protein FisN_15Lh249 [Fistulifera sol... [more]
GAX12770.11.700e-4340.59hypothetical protein FisN_15Hh249 [Fistulifera sol... [more]
XP_002185480.17.100e-4237.16predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_011100076.14.100e-3437.63S-adenosylmethionine carrier 1, chloroplastic/mito... [more]
XP_008232365.15.400e-3438.13PREDICTED: S-adenosylmethionine carrier 1, chlorop... [more]
XP_007205556.17.100e-3438.13S-adenosylmethionine carrier 1, chloroplastic/mito... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007976NSK007976Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03410.2NO01G03410.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G03410.1NO01G03410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577048gene_343Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g23gene1354Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03410.2NO01G03410.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G03410.1NO01G03410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03410 ID=NO01G03410|Name=NO01G03410|organism=Nannochloropsis oceanica|type=gene|length=3114bp
CCGCTCCTACACGCCGCAGGGTCGACATGCTTCTGACCCAGCCATGGGAA
TAAGTTGGGGGATGGAAAAAAGGATATAAATTGGTGACAGACATTCACGA
AGCAGCTGCGTGTGTTGTTGGAGAGAGTCGGAGGAAAAGGACATGCGGCC
CGGGCAAGACGCAGCTCGATGGCTCTCCAAGAAGCCTCAGGAGGCTCGCC
ATTTCTGTCCCCTTCCTCCTCCAAAACCTGCCCACCCACTCCCTTTACAC
GACGCACAGCGCACAACCAAGGCGTTCGCAGCATCCCAGACGTCCGTTGC
CTTTGCCTGTCTGTCTCGCCTGTTTGCCCAGGCAGCTTTCGCTCCAAGAC
GATGATGAAGCTGCTCAGGTTGCCCCTCGCCGTCGCCGTCCTGGCCTTGG
CCTCATGCTGGTTGGGCGAAGGCGTGCATGCCCTTAAGCCCGTCCCTTCC
AAGACTGCCGTCAAGACCATACCCCCTCCTCCTGCGCGCAAGGCAGACGT
CAGCCATAAGCTCAATACCTTCGACATGATGATTGCGgtatgtgcctctt
gaaggggagggcagggaggagcactagtactcacgcacggcccccgtctc
acacacacagGGTGGCTTTGCAACGGCCATGGGCGACCTGGCCATGCACC
CCATCGATACCATCAAGACGGTCCAACAGGCGGCGCCTGCGgtaagcgct
cagtgggagggtggggagcacagaggcgatggcaattgacctccccatcc
ttctccttccatcttcatcatttgccaccacaaatacagGGCCTGAGCAT
CGTCAAGGCCTGTGGCAAGATTCTAAAGGACATGGGGCCAATAGGCTTTT
ATGCAGgtaagtttaaattacccctatttgcacactcccttttcctcctc
gtcacctccccccccgcggaccttccctccctccttttcatatcagGTGT
GGTGCCTTACGTGACGATGGATGGGTTGTCCGGTGCCATTAAGTTCGCAA
CATACGAGTGGGGAAAGAAGCTAGTAGCGCCTATTCTACCACCTGCATTG
CATGCTTACTCGCACTTCGTGTGTGCAGCGGGTGCTTTCATTTCGTGCTC
CGTGGTGATGGTACCCGGCGAGTTGCTCAAGCAACGGTTGCAGgtaggta
gggttggaggggtaatgtaaagatagaagaagcgggtgtaagcgtgggcc
attcatatgataacggtgtacggagagactatgtaaaaagtattgccccc
tcgccctgctcgcgcttctcctgatgtagacgtcctttcatctcatcctc
ctcctcctattcaccttcctccttctttttcttttctctgctccagGCGG
GCGTGGTCCCCAGTATGGTGGGCGGCATCAAGCAGATCTGGAAGACGGAG
GGTTTGCCTGGCTTCTTCACAGGTTACAAgtacgtgagctatttccccac
acattacgacacgacgaacacaattaccaaaatcacaataatcaccacca
ttacagttatgtggataagaagaaaagatcttccccccgcgtatacttac
gtgccatcgcttctctcactcctatcctccctcctccccccctcctatat
gcatttagGGCCACCCTTATCCGCGACGTGCCCTACACCATGCTCGAGCT
TGGCCTCTACGAGAACTTCAAAACACTCCTCAAGAAGTACCGGAAGCGCG
AGgtaagtttcctcttcgccccctccctccctccctctctccttcctccc
tcaaagagatgttatttattccaccctgcctgcccttccctccctccttc
ccttcctagGAACTCACCACTCTTGAGGAGCTTAGCGCCGCTGCGGTCAC
CGGGGGCTTGGTCGGTCTCTTAACCAATCCCTTGGACTTAGTCAAGACAC
GCTTGATGACGGGGgtgggaaagggaggaaggaagggagggagggaagga
gggaaggagggcagggaggatgaaggacaggaatcaggcagagcaatcac
tgcctccattccagtcctttcgtgttctataatatcaatgtgtctttctt
cattgctaattgtccctctctcgttccatctttggtgttggatcacgtgc
atacggcatttggtcacctttattcctctctccctctcttcttccctctt
tgaagACGCAATACACGGGCTTCTTCGACGTGGTCCAGAAAATGTACAAG
ATGGAAGGCGGCGTCAATGCCTTCATGTCTGGCTCTAGCGCACGCGTGTT
GTGGCTGTTGCCATTCACGGTAATTCATTTGGGTGTTTATGAGAgtacgt
acggagggagagagggagggagggagggatcgattatttgtcacacggaa
tgtgtgcggggtttaagtggaagatacaaacttggtctgatttttctttg
cttcttttctcgttctctgtacttgcgatgtcgtatcgcaacacagTGTC
TAAGCGCATTCTGGCGGATCTCAAACCGACCGATGCCTTCAAGTGAGCCG
TTGGAAATTGGGAGAAATTGGACCGAGACCTTCGATGGGAGGGGGAAGGG
GTCGATCGAGGGGCAAGTAGAGGAAGTGGAGGAGGAAGAGGAAGAGGAAG
AGAGGACAGGACGACCACGACAAAGACGACTGTAATGAAAGCCTCGGGTG
AGTGATGTTGGTATTACGGTATACATAAAGGAAAATCGGATTCATCGTTG
CTTCCCTCCTTGATTTTGTGTTGGATAATTTCTGGAACTCAGTCAAGTAG
GCTAATATTTGCTGTGGGAGGAGACGTGCTCCCAATTTTGCTGCTTGTGT
GCGTGTTTTGTACACACGAAAAGGCGCGGGAGTGAGGGGCGTGAGAGAAA
GGAGAGAAGAAGACGTAGAAGAAGACGTAGAAGAAGCAGAAGAAGAAAAA
AGTAGGATAGAAGGGGGGCAGTAGTTTTTGCATTCGAATGTTTTAAGTCG
CATGCTAGGCAGCCAGCGATACCACCACCGCCACCTGACCTGCTCCCCAA
TATTTGTCGAGGAAGGGATCGGTAGGACACGGGCGGCCCAAGAAAGGAAA
GGGAAGACACGAAAGAGCGAAAATAAATCAATGAAAGTGAAAAGAGAACA
AGAAGCTAGCCACA
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protein sequence of NO01G03410.2

>NO01G03410.2-protein ID=NO01G03410.2-protein|Name=NO01G03410.2|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MALQEASGGSPFLSPSSSKTCPPTPFTRRTAHNQGVRSIPDVRCLCLSVS
PVCPGSFRSKTMMKLLRLPLAVAVLALASCWLGEGVHALKPVPSKTAVKT
IPPPPARKADVSHKLNTFDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPA
GLSIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVA
PILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIK
QIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELT
TLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGVGKGGRKGGREGGKEGRE
DEGQESGRAITASIPVLSCSIISMCLSSLLIVPLSFHLWCWITCIRHLVT
FIPLSLSSSLFEDAIHGLLRRGPENVQDGRRRQCLHVWL*
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protein sequence of NO01G03410.1

>NO01G03410.1-protein ID=NO01G03410.1-protein|Name=NO01G03410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MALQEASGGSPFLSPSSSKTCPPTPFTRRTAHNQGVRSIPDVRCLCLSVS
PVCPGSFRSKTMMKLLRLPLAVAVLALASCWLGEGVHALKPVPSKTAVKT
IPPPPARKADVSHKLNTFDMMIAGGFATAMGDLAMHPIDTIKTVQQAAPA
GLSIVKACGKILKDMGPIGFYAGVVPYVTMDGLSGAIKFATYEWGKKLVA
PILPPALHAYSHFVCAAGAFISCSVVMVPGELLKQRLQAGVVPSMVGGIK
QIWKTEGLPGFFTGYKATLIRDVPYTMLELGLYENFKTLLKKYRKREELT
TLEELSAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKMEG
GVNAFMSGSSARVLWLLPFTVIHLGVYEMSKRILADLKPTDAFK*
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Synonyms
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