NO01G03370, NO01G03370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_007560738.1 (PREDICTED: rho GTPase-activating protein 12 isoform X4 [Poecilia formosa]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 644 VKMCMDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 810
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_008436655.1 (PREDICTED: rho GTPase-activating protein 12 isoform X1 [Poecilia reticulata]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 670 VKMCIDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 836
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_008436656.1 (PREDICTED: rho GTPase-activating protein 12 isoform X2 [Poecilia reticulata]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 645 VKMCIDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 811
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014884142.1 (PREDICTED: rho GTPase-activating protein 12 isoform X1 [Poecilia latipinna]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 705 VKMCMDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 871
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014884143.1 (PREDICTED: rho GTPase-activating protein 12 isoform X2 [Poecilia latipinna]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 680 VKMCMDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 846
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014884144.1 (PREDICTED: rho GTPase-activating protein 12 isoform X3 [Poecilia latipinna]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 669 VKMCMDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 835
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014884145.1 (PREDICTED: rho GTPase-activating protein 12 isoform X4 [Poecilia latipinna]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 644 VKMCMDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 810
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014884146.1 (PREDICTED: rho GTPase-activating protein 12 isoform X5 [Poecilia latipinna]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 509 VKMCMDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 675
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014838113.1 (PREDICTED: rho GTPase-activating protein 12 isoform X1 [Poecilia mexicana]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 705 VKMCIDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 871
BLAST of NO01G03370 vs. NCBI_GenBank
Match: XP_014838114.1 (PREDICTED: rho GTPase-activating protein 12 isoform X2 [Poecilia mexicana]) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-7 Identity = 54/219 (24.66%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 147 LKIALDYLGSTALGEEGLYRVSGNKLDVDRLKVVLAAGLLSSSDILQSHYPDKHVIAGAIKKVLQE-HEPLLGYHSYADFVSVGAGSPGRLNEDEIVLEEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRYRDLVLQLRPTSRELLGHLLRHLRMVAARSEENKMTAENLAVTIGLNLLRKSESVAGVSIQQLEKERAVIMDLIVL 365 +K+ +D++ +T L +GLYRVSGN + +L+ A D+ S + D HV GA+K +E EPL Y S+ DFV+ S + + + +DL+ +L + + + L RHLR V E N+MT +++A+ G LLR +++ + + + I++LI+L Sbjct: 680 VKMCIDHVENTGLSVDGLYRVSGNLAVIQKLR--FAVNHDEKVDLNDSKWEDIHVTTGALKMFFRELPEPLFTYGSFNDFVNAIKCSDYKQRVNSV------------------------------------------------KDLIKKLPKPNHDTMQALFRHLRRVIEHGEANRMTTQSVAIVFGPTLLRPETETGNIAVHMVYQNQ--IVELILL 846 The following BLAST results are available for this feature:
BLAST of NO01G03370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03370 ID=NO01G03370|Name=NO01G03370|organism=Nannochloropsis oceanica|type=gene|length=2366bpback to top protein sequence of NO01G03370.1 >NO01G03370.1-protein ID=NO01G03370.1-protein|Name=NO01G03370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=565bpback to top Synonyms
Publications
|