NO01G03350, NO01G03350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_008613764.1 (septum site-determining protein MinD [Saprolegnia diclina VS20] >EQC33078.1 septum site-determining protein MinD [Saprolegnia diclina VS20]) HSP 1 Score: 355.1 bits (910), Expect = 2.100e-94 Identity = 176/267 (65.92%), Postives = 216/267 (80.90%), Query Frame = 0 Query: 42 RVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 +VV +TSGKGGVGKTT +ASIG GLA KG RTC+IDFDIGLRNLDIHLG ERRVIFDF+HV+ G+C L QA+IKDKR L LLAASQT+DK+ALT +GV K+L E++ EFD+IICDSPAGIESGA+HAM+FAD+AIIVTNPE+SSCRDSDKMIGFI+SKS RA+ G+ V Q LL+ RYD +R EECL +EDI+E+L L ++GVIPES +L ++N+GQPVI A A+ DTV RF+GEE+E +FL+P K G+ LF+ Sbjct: 41 KVVVVTSGKGGVGKTTCSASIGYGLAQKGYRTCLIDFDIGLRNLDIHLGCERRVIFDFIHVIDGNCRLSQALIKDKRLEKLSLLAASQTRDKDALTEDGVAKVLEELKHEFDYIICDSPAGIESGARHAMFFADEAIIVTNPEISSCRDSDKMIGFIASKSLRAQEGRAKVNQYLLINRYDAKRVSNEECLSVEDIQEMLALPVVGVIPESAQVLNSSNMGQPVIASKTDKAAVAFEDTVARFLGEERELKFLTPEKSMGLFGRLFN 307
BLAST of NO01G03350 vs. NCBI_GenBank
Match: GAX99237.1 (septum site-determining protein MinD [Pythium insidiosum]) HSP 1 Score: 352.8 bits (904), Expect = 1.100e-93 Identity = 180/294 (61.22%), Postives = 227/294 (77.21%), Query Frame = 0 Query: 17 RVGSLLQRASLA-SVMTGTR-SIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308 R LL+ SL TG + RVV ITSGKGGVGKTT AS+G GLA++G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR NL LLAASQT+DK+ALT +GV +L E++ +FD+I+CDSPAGIE+GA+HAM+FADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+E VRQ LL+ RYD R + ++CL +EDI+E+LGL L+GV PES +LT++N+GQPVI A A+ D V RF+GEE+E +FL P KP G+L +F+ Sbjct: 7 RSSPLLRHVSLTRHASTGLNGNAAPQGRVVVITSGKGGVGKTTVTASLGYGLAMQGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLENLSLLAASQTRDKDALTEDGVEAVLDELKTQFDYILCDSPAGIENGARHAMFFADDAILVTNPEISSCRDSDKMIGFIASKSLRAQEGREAVRQRLLINRYDANRVKSDDCLSVEDIEEMLGLPLVGVXPESTHVLTSSNMGQPVITATGDKAAIAFEDAVARFLGEERELKFLEPDKPKGLLDRIFA 300
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_020438725.1 (hypothetical protein PPL_00421 [Heterostelium album PN500] >EFA86620.1 hypothetical protein PPL_00421 [Heterostelium album PN500]) HSP 1 Score: 350.9 bits (899), Expect = 4.000e-93 Identity = 167/271 (61.62%), Postives = 218/271 (80.44%), Query Frame = 0 Query: 36 SIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICM-PDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSML 306 ++ D +++ +TSGKGG GKTT+++S GLA KG + C IDFDIGLRNLDIH G ERRV+FDF++VL+GDCTL+QA+IKD++NPNLYLLAASQTKDK AL +E V K+L E+R FD+I+CDSPAGIESGA HAMY++D AII TNPELSS RDSDKM+G ++SKSKRA G++P++ +LL+TRY PERAE L ++DI+E LG++LLGV+PES+ IL+ TN+G+PVI + + D +AY D V+RF+GE K RF PKPTG+ S + Sbjct: 37 TVPRDQKIIVVTSGKGGTGKTTSSSSFSYGLAEKGYKVCTIDFDIGLRNLDIHFGMERRVVFDFINVLNGDCTLRQALIKDRKNPNLYLLAASQTKDKTALKMEAVEKVLDELRENFDYIVCDSPAGIESGAHHAMYWSDSAIICTNPELSSVRDSDKMLGILASKSKRALEGKDPIKLNLLITRYSPERAESGGMLSVKDIQENLGIKLLGVVPESQDILSCTNLGRPVITLDKNSDPAEAYRDVVDRFLGENKPMRFTEPKPTGLFSKM 307
BLAST of NO01G03350 vs. NCBI_GenBank
Match: CCI39617.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 348.6 bits (893), Expect = 2.000e-92 Identity = 179/297 (60.27%), Postives = 224/297 (75.42%), Query Frame = 0 Query: 11 RALGAARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPT-GILSMLF 307 R + V ++ A L+S MT G RVV +TSGKGGVGKTT ASIG GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR NL LLAASQT+DK ALT GV K+L +++++FD+IICDSPAGIESGA+HAMYFAD+AIIVTNPE+SSCRDSDKM+G+ISS S RA ++PV Q+LL+ RYD R + +ECL + DI+E+LGL +LGVIPES +LT++N+GQPVI + A A+ D V RF+G+ +E +FL PK G L LF Sbjct: 2 RRFAHSTVAKSIRLARLSSTMTADTQSG---RVVVVTSGKGGVGKTTVTASIGYGLAERGYRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLENLSLLAASQTRDKEALTEAGVEKVLDDLKQQFDYIICDSPAGIESGARHAMYFADEAIIVTNPEISSCRDSDKMVGYISSSSLRAIENRQPVHQTLLINRYDANRVKSDECLSVHDIEEMLGLSVLGVIPESAHVLTSSNMGQPVITATGEPAAIAFDDAVARFLGDTREMKFLEPKQNFGFLKRLF 295
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_002291334.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91441.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 347.8 bits (891), Expect = 3.400e-92 Identity = 170/272 (62.50%), Postives = 217/272 (79.78%), Query Frame = 0 Query: 42 RVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQ------EPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQD-AGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307 R+VCITSGKGGVGKTT+AAS GLAL+G TCV+DFDIGLRNLDIHLG ERRVIFD VHVL +CTL QA+I DK+ L +LAASQT+DK++LT+EGV ++L+E+ +FD++I DSPAGIESGA+HAMYF DDAI+VTNPE+SSCRD+DKMIGF+SS+S+RAE+G V Q+LL+TRYDP RAE EE L + D+K+LLGL ++GVIPES+ +LT TN+G P+I + D++ A AYMD V+RF+G EKE RF++ + +F Sbjct: 102 RIVCITSGKGGVGKTTSAASFATGLALRGHSTCVVDFDIGLRNLDIHLGVERRVIFDIVHVLQNECTLNQALIADKKVKGLSMLAASQTRDKDSLTLEGVERVLSELADKFDYVILDSPAGIESGARHAMYFCDDAIVVTNPEMSSCRDADKMIGFVSSRSRRAEIGDGGENGCMAVSQTLLITRYDPARAEAEESLSISDMKDLLGLPVIGVIPESRDVLTCTNLGTPIISLGDENSAAGAYMDMVDRFLGHEKELRFVTSEHVSFFKRIF 373
BLAST of NO01G03350 vs. NCBI_GenBank
Match: WP_027669573.1 (septum site-determining protein MinD [Rheinheimera baltica]) HSP 1 Score: 347.8 bits (891), Expect = 3.400e-92 Identity = 162/266 (60.90%), Postives = 223/266 (83.83%), Query Frame = 0 Query: 41 SRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307 ++++ +TSGKGGVGKTT++A+IG GLALKG +T +IDFDIGLRNLD+ +G ERRV++DFV+V++G+ LKQ +IKDKR NL++L ASQT+DK+ALT EGV ++L E+ ++FDFI+CDSPAGIE+GA A+YFAD+A++VTNPE+SS RDSD+++G +SSKS+RAE GQ+ +++ LL+TRY+PER EK E L +ED+KE+L ++LLGVIPES+ +L A+N GQPVI D DAGQAY+DTVER +GE+ FRFL+ + G+L +F Sbjct: 2 AKIIVVTSGKGGVGKTTSSAAIGTGLALKGHKTVIIDFDIGLRNLDLIMGCERRVVYDFVNVINGEANLKQTLIKDKRTDNLFILPASQTRDKDALTKEGVERVLNELAKDFDFILCDSPAGIEAGAMMALYFADEAVVVTNPEVSSVRDSDRILGMLSSKSRRAENGQDAIKEHLLLTRYNPERVEKGEMLSVEDVKEILSIDLLGVIPESQAVLNASNSGQPVILDTDSDAGQAYLDTVERLLGEKVPFRFLTVEKKGLLKRIF 267
BLAST of NO01G03350 vs. NCBI_GenBank
Match: WP_039769880.1 (MULTISPECIES: septum site-determining protein MinD [Pseudomonas] >KIF58884.1 cell division inhibitor MinD [Pseudomonas fluorescens] >ANI53488.1 cell division inhibitor MinD [Pseudomonas sp. DR 5-09] >SCZ28519.1 septum site-determining protein MinD [Pseudomonas sp. NFIX46] >SDB04417.1 septum site-determining protein MinD [Pseudomonas putida] >SFQ84804.1 septum site-determining protein MinD [Pseudomonas sp. NFIX49] >POA31695.1 septum site-determining protein MinD [Pseudomonas sp. FW104-15G4B]) HSP 1 Score: 347.8 bits (891), Expect = 3.400e-92 Identity = 164/266 (61.65%), Postives = 220/266 (82.71%), Query Frame = 0 Query: 41 SRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307 ++++ +TSGKGGVGKTTT+A+IG GLAL+G +T ++DFD+GLRNLD+ +G ERRV++DFV+V++G+ L+QA+IKDKR NLY+LAASQT+DK+ALTVEGV K+L E++ +FDF++CDSPAGIE GA AMYFAD+AI+VTNPE+SS RDSD+M+G ++SKS+RAE G+EP+++ LL+TRY PER EK E L +ED+KE+L + LLGVIPES+ +L A+N G PVI DAGQAY DTV+R +G+EKE RFL+ + G LF Sbjct: 2 AKILVVTSGKGGVGKTTTSAAIGTGLALRGHKTVIVDFDVGLRNLDLIMGCERRVVYDFVNVVNGEANLQQALIKDKRLENLYVLAASQTRDKDALTVEGVEKVLMELKEQFDFVVCDSPAGIEKGAHLAMYFADEAIVVTNPEVSSVRDSDRMLGLLASKSRRAERGEEPIQEHLLITRYHPERVEKGEMLGVEDVKEILAVRLLGVIPESQAVLKASNQGVPVILDDQSDAGQAYSDTVDRLLGKEKEHRFLNVEKKGFFERLF 267
BLAST of NO01G03350 vs. NCBI_GenBank
Match: WP_070048931.1 (septum site-determining protein MinD [Rheinheimera salexigens] >OEY69365.1 septum site-determining protein MinD [Rheinheimera salexigens]) HSP 1 Score: 347.4 bits (890), Expect = 4.400e-92 Identity = 162/266 (60.90%), Postives = 222/266 (83.46%), Query Frame = 0 Query: 41 SRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307 ++++ +TSGKGGVGKTT++A+IG GLALKGK+T ++DFDIGLRNLD+ +G ERRV++DFV+V++GD LKQ +IKDKR NL++L ASQT+DK+ALT EGV ++L E+ ++FDFIICDSPAGIE+GA A+YFAD+AI+VTNPE+SS RDSD+++G +SSKS+RAE Q+ +++ LL+TRY+PER EK E L +ED+KE+L ++LLGVIPES+ +L A+N GQPVI D DAGQAY+DTV R +GE+ FRF++ + G+L +F Sbjct: 2 AKIIVVTSGKGGVGKTTSSAAIGTGLALKGKKTVIVDFDIGLRNLDLIMGCERRVVYDFVNVINGDSNLKQTLIKDKRTDNLFILPASQTRDKDALTKEGVERVLNELAKDFDFIICDSPAGIEAGAMMALYFADEAIVVTNPEVSSVRDSDRILGMLSSKSRRAENSQDSIKEHLLLTRYNPERVEKGEMLSVEDVKEILSIDLLGVIPESQAVLNASNSGQPVILDTDSDAGQAYLDTVNRLLGEQVPFRFINVEKKGLLKRIF 267
BLAST of NO01G03350 vs. NCBI_GenBank
Match: CCI39620.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 346.3 bits (887), Expect = 9.900e-92 Identity = 171/266 (64.29%), Postives = 212/266 (79.70%), Query Frame = 0 Query: 42 RVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPT-GILSMLF 307 RVV +TSGKGGVGKTT ASIG GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+ +C L QA+IKDKR NL LLAASQT+DK ALT GV K+L +++++FD+IICDSPAGIESGA+HAMYFAD+AIIVTNPE+SSCRDSDKM+G+ISS S RA ++PV Q+LL+ RYD R + +ECL + DI+E+LGL +LGVIPES +LT++N+GQPVI + A A+ D V RF+G+ +E +FL PK G L LF Sbjct: 9 RVVVVTSGKGGVGKTTVTASIGYGLAERGYRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLENLSLLAASQTRDKEALTEAGVEKVLDDLKQQFDYIICDSPAGIESGARHAMYFADEAIIVTNPEISSCRDSDKMVGYISSSSLRAIENRQPVHQTLLINRYDANRVKSDECLSVHDIEEMLGLSVLGVIPESAHVLTSSNMGQPVITATGEPAAIAFDDAVARFLGDTREMKFLEPKQNFGFLKRLF 274
BLAST of NO01G03350 vs. NCBI_GenBank
Match: WP_007960065.1 (MULTISPECIES: septum site-determining protein MinD [Pseudomonas] >ABA73437.1 cell division inhibitor [Pseudomonas fluorescens Pf0-1] >EJM22881.1 septum site-determining protein MinD [Pseudomonas sp. GM25] >PNA01184.1 septum site-determining protein MinD [Pseudomonas sp. FW305-BF15] >PNB47976.1 septum site-determining protein MinD [Pseudomonas sp. GW456-12-10-14-LB2] >PNB78204.1 septum site-determining protein MinD [Pseudomonas sp. FW305-BF6]) HSP 1 Score: 346.3 bits (887), Expect = 9.900e-92 Identity = 163/266 (61.28%), Postives = 220/266 (82.71%), Query Frame = 0 Query: 41 SRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307 ++++ +TSGKGGVGKTTT+A+IG GLAL+G +T ++DFD+GLRNLD+ +G ERRV++DFV+V++G+ L+QA+IKDKR NLY+LAASQT+DK+ALTVEGV K+L E++ +F+F++CDSPAGIE GA AMYFAD+AI+VTNPE+SS RDSD+M+G ++SKS+RAE G+EP+++ LL+TRY PER EK E L +ED+KE+L + LLGVIPES+ +L A+N G PVI DAGQAY DTV+R +G+EKE RFL+ + G LF Sbjct: 2 AKILVVTSGKGGVGKTTTSAAIGTGLALRGHKTVIVDFDVGLRNLDLIMGCERRVVYDFVNVVNGEANLQQALIKDKRLENLYVLAASQTRDKDALTVEGVEKVLMELKEQFEFVVCDSPAGIEKGAHLAMYFADEAIVVTNPEVSSVRDSDRMLGLLASKSRRAERGEEPIQEHLLITRYHPERVEKGEMLGVEDVKEILAVRLLGVIPESQAVLKASNQGVPVILDDQSDAGQAYSDTVDRLLGKEKEHRFLNVEKKGFFERLF 267 The following BLAST results are available for this feature:
BLAST of NO01G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03350 ID=NO01G03350|Name=NO01G03350|organism=Nannochloropsis oceanica|type=gene|length=1867bpback to top protein sequence of NO01G03350.1 >NO01G03350.1-protein ID=NO01G03350.1-protein|Name=NO01G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bpback to top Synonyms
Publications
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