NO01G03350, NO01G03350 (gene) Nannochloropsis oceanica

Overview
NameNO01G03350
Unique NameNO01G03350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1867
Alignment locationchr1:876599..878465 +

Link to JBrowse

Properties
Property NameValue
DescriptionSeptum site-determining protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:876599..878465 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR025669AAA_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: EWM29264.1 (septum site-determining protein [Nannochloropsis gaditana])

HSP 1 Score: 522.3 bits (1344), Expect = 1.000e-144
Identity = 259/273 (94.87%), Postives = 270/273 (98.90%), Query Frame = 0 
Query:   35 RSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLFS 308
            RS+ SDSRV+CITSGKGGVGKTTTAASIGMGLALKGK+TCVIDFDIGLRNLDIHLGAERRVIFDFVHVL GDCTLKQAMIKDKRNPNL+LLAASQTKDKNALTV+ VGKMLAEMRREFDFIICDSPAGIESGA+HAMYFADDAIIVTNPELSSCRDSDKMIGFISS+SKRAELGQEPVRQSLLVTRYDPERA+KEECLRLEDIKELLGLELLGVIPESKCILTATN+GQPVICMPDQDAGQAYMDTVERF+GEEKEFRFLSP+PTGILSMLFS
Sbjct:   44 RSVASDSRVLCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLFS 316
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: CBJ31561.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 379.4 bits (973), Expect = 1.100e-101
Identity = 186/282 (65.96%), Postives = 228/282 (80.85%), Query Frame = 0 
Query:   27 LASVMTGTRSIGSDSR--VVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSMLF 307
            L++V T   + G D    VV +TSGKGGVGKTTTAAS+  GLA  G RTCVIDFDIGLRN+D+HLG ERRVIFDFV+V+   CTL QA+I+D+RNP L LLAASQTKDK ALT EGV +++ E+++ FD+++CDSPAGIESGA+HAMY AD+A+IVTNPE+SSCRDSDKM+GFI+SKS+RAE GQ PVRQ+LLVTRYDP RAE  E L L DI+ELLGLE+LG+IPESK +LTATN+GQPVI     DA  AY D V+RF+G+  + +F+ PKP G+L  +F
Sbjct:   54 LSTVSTAGGNGGKDGEGCVVVVTSGKGGVGKTTTAASLSYGLAQAGHRTCVIDFDIGLRNMDLHLGCERRVIFDFVNVIQEQCTLNQALIQDRRNPGLSLLAASQTKDKEALTQEGVTRVIRELQKSFDYVVCDSPAGIESGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFIASKSRRAETGQAPVRQTLLVTRYDPARAESNEMLTLADIQELLGLEVLGLIPESKAVLTATNLGQPVIVSEGDDAATAYKDAVDRFLGKTVDLKFVQPKPAGLLKRMF 335
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: ETI30974.1 (septum site-determining protein MinD [Phytophthora parasitica P1569])

HSP 1 Score: 366.7 bits (940), Expect = 7.100e-98
Identity = 187/294 (63.61%), Postives = 230/294 (78.23%), Query Frame = 0 
Query:   15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308
            A R  SLL    LAS M+G++  G   RVV ITSGKGGVGKTT  AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+  +C L QA+IKDKR   L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD  R + ++CL ++DI+E+LGL + GVIPES  +LT++N+GQPVI    + A  A+ D V RF+GEE+E +FL P +P G+   +FS
Sbjct:    8 ARRTSSLLSGGRLASTMSGSKQPG---RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_008915169.1 (septum site-determining protein MinD [Phytophthora parasitica INRA-310] >ETK71359.1 septum site-determining protein MinD [Phytophthora parasitica] >ETL24801.1 septum site-determining protein MinD [Phytophthora parasitica] >ETM99548.1 septum site-determining protein MinD [Phytophthora parasitica INRA-310] >ETP00773.1 septum site-determining protein MinD [Phytophthora parasitica CJ01A1] >ETP28924.1 septum site-determining protein MinD [Phytophthora parasitica P10297])

HSP 1 Score: 366.7 bits (940), Expect = 7.100e-98
Identity = 187/294 (63.61%), Postives = 230/294 (78.23%), Query Frame = 0 
Query:   15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308
            A R  SLL    LAS M+G++  G   RVV ITSGKGGVGKTT  AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+  +C L QA+IKDKR   L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD  R + ++CL ++DI+E+LGL + GVIPES  +LT++N+GQPVI    + A  A+ D V RF+GEE+E +FL P +P G+   +FS
Sbjct:    8 ARRTSSLLSGGRLASTMSGSKQPG---RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: ETL78028.1 (septum site-determining protein MinD [Phytophthora parasitica])

HSP 1 Score: 366.7 bits (940), Expect = 7.100e-98
Identity = 187/294 (63.61%), Postives = 230/294 (78.23%), Query Frame = 0 
Query:   15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308
            A R  SLL    LAS M+G++  G   RVV ITSGKGGVGKTT  AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+  +C L QA+IKDKR   L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD  R + ++CL ++DI+E+LGL + GVIPES  +LT++N+GQPVI    + A  A+ D V RF+GEE+E +FL P +P G+   +FS
Sbjct:    8 ARRTSSLLSGGRLASTMSGSKQPG---RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: ETM31289.1 (septum site-determining protein MinD [Phytophthora parasitica] >ETO59687.1 septum site-determining protein MinD [Phytophthora parasitica P1976])

HSP 1 Score: 365.5 bits (937), Expect = 1.600e-97
Identity = 186/294 (63.27%), Postives = 230/294 (78.23%), Query Frame = 0 
Query:   15 AARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308
            A R  SLL    LAS M+G++  G   RV+ ITSGKGGVGKTT  AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+  +C L QA+IKDKR   L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD  R + ++CL ++DI+E+LGL + GVIPES  +LT++N+GQPVI    + A  A+ D V RF+GEE+E +FL P +P G+   +FS
Sbjct:    8 ARRTSSLLSGGRLASTMSGSKQPG---RVMVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEEGVEEVLDELRSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPERPKGLFGRIFS 298
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_012751945.1 (hypothetical protein SAMD00019534_080310 [Acytostelium subglobosum LB1] >GAM24856.1 hypothetical protein SAMD00019534_080310 [Acytostelium subglobosum LB1])

HSP 1 Score: 357.1 bits (915), Expect = 5.600e-95
Identity = 170/271 (62.73%), Postives = 221/271 (81.55%), Query Frame = 0 
Query:   36 SIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPD-QDAGQAYMDTVERFMGEEKEFRFLSPKPTGILSML 306
            ++  D +++ +TSGKGG GKTT+++S   GLA KG +TCVIDFDIGLRNLDIH G ERRV+FDF++VL+GDCTL+QA+IKD++NPNLYLLAASQTKDK AL +E V K+L E+R  FD+I+CDSPAGIESGA HAMY++D AII TNPELSS RDSDKM+G ++SKSKRA  G++P++ +LL+TRY PERAE    L ++DI+E LG++L+GV+PES+ ILT TN+G+PVI +    D  +AY D VERF+G+ K FRF+ PKPTG+ S +
Sbjct:   28 TVPHDQKIIVVTSGKGGTGKTTSSSSFSYGLAEKGFKTCVIDFDIGLRNLDIHFGMERRVVFDFINVLNGDCTLRQALIKDRKNPNLYLLAASQTKDKTALKMEAVEKVLDELRESFDYIVCDSPAGIESGAHHAMYWSDQAIICTNPELSSVRDSDKMLGILASKSKRALEGKDPIKLNLLITRYSPERAESGGMLSVKDIQENLGIKLIGVVPESQDILTCTNLGRPVITLDKASDPAEAYRDVVERFLGDPKPFRFIEPKPTGLFSKM 298
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: OQR83748.1 (septum site-determining protein minD [Achlya hypogyna])

HSP 1 Score: 356.3 bits (913), Expect = 9.600e-95
Identity = 184/300 (61.33%), Postives = 229/300 (76.33%), Query Frame = 0 
Query:   17 RVGSLLQRASLASV--------MTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308
            R+ S L R S A+         M  T       +VV +TSGKGGVGKTT +ASIG GLA KG RTC+IDFDIGLRNLDIHLG ERRVIFDF+HV+ G+C L QA+IKDKR   L LLAASQT+DK+ALT +GVG++L E++++FDFIICDSPAGIESGA+HAM+FAD+AIIVTNPE+SSCRDSDKMIGFI+SKS RA+ G+  V Q LL+ RYD +R   EECL +EDI+E+L L ++GVIPES  +L ++N+GQPVI      A  A+ DTV RF+GEE++F+FL+P K  G+   LF+
Sbjct:    7 RIPSALLRQSHATFTAVAGLGNMDATAGGSPQGKVVVVTSGKGGVGKTTCSASIGYGLAQKGFRTCLIDFDIGLRNLDIHLGCERRVIFDFIHVIDGNCRLSQALIKDKRLDKLSLLAASQTRDKDALTEDGVGRVLEELKQDFDFIICDSPAGIESGARHAMFFADEAIIVTNPEISSCRDSDKMIGFIASKSLRAQEGRAKVNQYLLINRYDAKRVSNEECLSVEDIQEMLALPVVGVIPESAQVLNSSNMGQPVIASKTDKAAVAFEDTVARFLGEERDFKFLTPEKSLGLFGRLFN 306
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_002902419.1 (septum site-determining protein minD [Phytophthora infestans T30-4] >EEY56345.1 septum site-determining protein minD [Phytophthora infestans T30-4])

HSP 1 Score: 355.5 bits (911), Expect = 1.600e-94
Identity = 183/297 (61.62%), Postives = 228/297 (76.77%), Query Frame = 0 
Query:   17 RVGSLLQRASLA-----SVMTGTRSIGSDSRVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPK-PTGILSMLFS 308
            R   LL R +LA        TGT+  G   RVV +TSGKGGVGKTT  AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+  +C L QA+IKDKR   L LLAASQT+DK ALT +GV ++L E++ +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+EPV Q LLV RYD  R + ++CL ++DI+E+LGL + GVIPES  +LT++N+GQPVI    + A  A+ D V RF+GEE+E +FL P+ P G+   +FS
Sbjct:    2 RSSLLLTRRTLALSAGRCASTGTKQPG---RVVVVTSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLERLSLLAASQTRDKEALTEDGVEEVLDELKSQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVNQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPEPPKGLFGRIFS 295
[Close]
BLAST of NO01G03350 vs. NCBI_GenBank
Match: XP_009524594.1 (hypothetical protein PHYSODRAFT_251466 [Phytophthora sojae] >EGZ21877.1 hypothetical protein PHYSODRAFT_251466 [Phytophthora sojae])

HSP 1 Score: 355.1 bits (910), Expect = 2.100e-94
Identity = 175/267 (65.54%), Postives = 218/267 (81.65%), Query Frame = 0 
Query:   42 RVVCITSGKGGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRREFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISSKSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIPESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSP-KPTGILSMLFS 308
            RVV ITSGKGGVGKTT  AS+G GLA +G RTC+IDFDIGLRNLD+HLG ERRVIFDF+HV+  +C L QA+I+DKR   L LLAASQT+DK ALT EGV ++L E+R +FDFI+CDSPAGIESGA+HAMYFADDAI+VTNPE+SSCRDSDKMIGFI+SKS RA+ G+ PV+Q LLV RYD  R + ++CL ++DI+E+LGL + GVIPES  +LT++N+GQPVI    ++A  A+ D V RF+GEE+E +FL P +P G+ S +FS
Sbjct:   15 RVVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLGQALIRDKRLDKLSLLAASQTRDKEALTEEGVEQVLDELRTQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGRAPVQQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGENAAVAFEDAVARFLGEEREMKFLQPDEPKGLFSRIFS 281
The following BLAST results are available for this feature:
BLAST of NO01G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29264.11.000e-14494.87septum site-determining protein [Nannochloropsis g... [more]
CBJ31561.11.100e-10165.96conserved unknown protein [Ectocarpus siliculosus][more]
ETI30974.17.100e-9863.61septum site-determining protein MinD [Phytophthora... [more]
XP_008915169.17.100e-9863.61septum site-determining protein MinD [Phytophthora... [more]
ETL78028.17.100e-9863.61septum site-determining protein MinD [Phytophthora... [more]
ETM31289.11.600e-9763.27septum site-determining protein MinD [Phytophthora... [more]
XP_012751945.15.600e-9562.73hypothetical protein SAMD00019534_080310 [Acytoste... [more]
OQR83748.19.600e-9561.33septum site-determining protein minD [Achlya hypog... [more]
XP_002902419.11.600e-9461.62septum site-determining protein minD [Phytophthora... [more]
XP_009524594.12.100e-9465.54hypothetical protein PHYSODRAFT_251466 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007983NSK007983Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03350.1NO01G03350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|237273gene_335Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100029g16gene1360Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03350.1NO01G03350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03350 ID=NO01G03350|Name=NO01G03350|organism=Nannochloropsis oceanica|type=gene|length=1867bp
ACAGCAAATGGCATTTGTTTTGTCCAGCGCTTCGAGACGAGCACTTGGTG
CCGCTAGGGTAGGCTCGCTCTTGCAGCGCGCCTCCCTCGCAAGTGTCATG
ACGGGTACACGAAGCATCGGCAGCGACTCGCGCGTAGTGTGCATTACTTC
TGGGAAAGGCGGCGTGGGCAAGACTACGACGGCAGCCAGCATTGGAATGG
GGCTAGCGTTGAAGGGAAAGAGGACTTGCGTGATTGATTTTGATATTGGT
TTGCGTAACTTGGACATACATTTGgtacgtgtgtgatgacgggtgtagcg
agggtggcaagggtgaggtttgatgtagatcaatcgcagcagactacatt
gctcgaggccttcttctacttgtcctctttatgtttattgttatgttcaa
tttaattattgctatcactccctttttttaacccatccctccccccctct
ttcatcgcactctagGGCGCAGAACGAAGAGTGATCTTCGATTTTGTCCA
CGTTCTGCACGGAGACTGCACGCTCAAGCAAGCCATGATCAAGGACAAGC
GCAATCCGAACTTGTACCTCCTGGCTGCCTCACAAACCAAGGATAAGAAC
GCCCTGACCGTCGAAGGGGTCGGCAAGATGCTCGCGGAAATGCGGCGGGA
ATTCGACTTTATCATCTGTGATTCCCCGGCTGGGATTGAGAGTGGGGCGA
AGCACGCCATGTATTTCGCGGATGATGCCATCATTGTGACAAATCCCGAG
TTGAGCTCGTGCCGgtagttcttagggcagggcgggcgggcgggcgggag
ggagggagggagggagagagggagggaaggagggttgcatgtgatcgatt
cgtctctcataacgcgaggaattttgataaatgatccctccctttctcct
tccctccttcccacccttccactctttcccctccctcccttatcccgcag
CGACAGCGACAAGATGATCGGTTTCATTTCCAGCAAGTCCAAACGGGCCG
AGCTGGGCCAAGAGCCCGTGCGGCAATCATTGCTAGTCACGCGATACGAC
CCCGAGCGGGCGGAGAAAGAGGAATGCTTGCGGTTGGAGGATATCAAGgt
acgtctctcggcttgtaggggtgcttgctgggagctttaactcaatatga
agacaacatgggaagtcttcacttatcccggcccaacccataccatctct
ctatcccaccttccctccctcacgccctctcccattctacccttctcgtc
ctcctcctatccctacagGAACTCCTGGGGCTAGAGCTGCTGGGCGTGAT
TCCCGAAAGCAAGTGCATCTTGACAGCCACTAACATCGGGCAACCCGTCA
TTTGCATGCCGGACCAAGACGCAGGACAAGgtgaggacagagaacggggg
gggggcgaatttagtggactcccttccaacaattggtcttatacaatgat
ttactcatggatgtacacaccctgccgccttccccccctcacagCCTACA
TGGACACCGTGGAGCGTTTCATGGGAGAAGAGAAGGAGTTCCGTTTCCTG
AGCCCCAAGCCCACGGGCATCCTATCAATGTTGTTTTCGTGAGTATCGGC
TTGGATGGGTCAAGATCTTAACTCTTCGTCCGCGTGGACATTCGAGGGAG
GGAGGGGAGGAAGGGAGGGAGGTGGGGAGGGTGTCCTTGCGGTGAAGGGG
GTTAGAAGGAAGACAAGGGAGGAGGAATGGAGGATGGAGAAGGAAAATGC
TACCGCCGATTGATGGGTCACCTGGCTGCATCCCCTTATTCATTTCCGCG
TGTGTATTTATGCTCTACATTTTTTGAGGCCCGCAACAAAGAAAAACGAA
AACCATCGCTGCTGAGA
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protein sequence of NO01G03350.1

>NO01G03350.1-protein ID=NO01G03350.1-protein|Name=NO01G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bp
MAFVLSSASRRALGAARVGSLLQRASLASVMTGTRSIGSDSRVVCITSGK
GGVGKTTTAASIGMGLALKGKRTCVIDFDIGLRNLDIHLGAERRVIFDFV
HVLHGDCTLKQAMIKDKRNPNLYLLAASQTKDKNALTVEGVGKMLAEMRR
EFDFIICDSPAGIESGAKHAMYFADDAIIVTNPELSSCRDSDKMIGFISS
KSKRAELGQEPVRQSLLVTRYDPERAEKEECLRLEDIKELLGLELLGVIP
ESKCILTATNIGQPVICMPDQDAGQAYMDTVERFMGEEKEFRFLSPKPTG
ILSMLFS*
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Synonyms
Publications