NO01G03300, NO01G03300 (gene) Nannochloropsis oceanica

Overview
NameNO01G03300
Unique NameNO01G03300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2725
Alignment locationchr1:864282..867006 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:864282..867006 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050290sphingomyelin phosphodiesterase D activity
GO:0050290sphingomyelin phosphodiesterase D activity
Vocabulary: INTERPRO
TermDefinition
IPR024129Sphingomy_SMPD4
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO01G03300 vs. NCBI_GenBank
Match: EWM29271.1 (hypothetical protein Naga_100029g11 [Nannochloropsis gaditana])

HSP 1 Score: 691.4 bits (1783), Expect = 3.500e-195
Identity = 394/861 (45.76%), Postives = 531/861 (61.67%), Query Frame = 0
Query:   15 RDPLSPLIKAALSSSKESDLKEACDVLGRELAQPGGATYFSFLDRCFGMHGQPSTRMRIDGGWVSKSSKPERVVTLLTSENRLKWDNAYRMLASFSKHDPGFALDVEMLPVRTEEYLRGDPPADVERLATDNSKRLYEFFFFARTRPHXXXXXXXXXXXXXXXXXXXXXXPRTTKAGFTRLPFIVPHLDYYHFIFAYHAVYPKIGINTP---VSLAYQQDLASGAITPTGLLETARKAHNAYLDLLQAYIYTYFPRTSTPQFESKNNTLDPIKALALPEDSEKFLRILIEMWLERNPCLNPNTKIHPDTSDAENQFYPNIPTQPSLRYEEPSFQVLQALLVLLPHLLARKVEVELVAQTHGPRVSRAA-TIPAFCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKGQGEAALVFRWRETFLKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVPKSVKKVWFWIWEMV----------MVYFYHLLD--------WGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADEQALDAQLRDAERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEYATWCAVREEEKKEEGKEREGAKQGRV---------------TATVGKDWGHMLVKETEGIEITPISLRFCIGGCCVNSVVILLAMFVVWVVLSWTTAHKLLLQ 839
            ++PLS L KAA++   ++ L++AC  L REL +     ++  LD C GMH QP  R   DGGW+SK  K  R+V LL+S ++  W N Y +L   S+   GFALD+++LP+RT  YL GDP    ERL+T+NSKRLYE+FFFARTRPH                         ++ G TRLPF++PHLD+YHFIFAY AV PK G  T     SL++ +++AS  ITP  +L   R   + Y  +L++Y+ TYFP  + P  + K    DP+KALAL E++EKFLRI IEMWLERNP  NP+ K H ++SD ENQ    +P      YEEP+ ++L ALL+ +P+LLARKVEVE++ Q  G R  RA+   PAFC ALDALQQP+F FL++ FRRL +E  GW KFL++VE+WL+W+TP     R    ++ Q + +L  RW+++FLKAYVVSNFHFYTT+ +L+MRK REALGADA+ + V+L+QL RVL+A     LR+ L  VS++A ELW  G+Q+RGR  + HHL RLRL RSKPCL  + AQDAH+LAAELLA RKR ++ M++    W A + K    VW WI   V          +     LL+         G+R G   + +                      QID VLEE+Y IFPSV+ KCQ+ L +++A DAQLRD +RRG+LLT  GREQLL+GQRACDP KA Y+GDPLFDPVL S+EYG LLPWAQ+AS+WLSK + P + +      EE++ E K  +    G                  +++G +WGH+ +KET+  ++ P++LR+ I    V S  I+L      +V+ W     +L +
Sbjct:   17 QEPLSQL-KAAMTKMDDTSLRQACLELSRELRRE--YIFYCVLDGCLGMHAQPRWR-TTDGGWMSKPPKAARIVALLSSHSKYSW-NIYHLLDILSRDREGFALDIDILPIRTRYYLDGDPSEANERLSTENSKRLYEYFFFARTRPHAIAPTSGSGV-------------AISQNGSTRLPFVIPHLDFYHFIFAYWAVCPKSGTATTSPHPSLSFLKEIASKPITPVSILANPRV--SVYCTVLRSYLLTYFPSPAGPDLDRKGGLSDPVKALALNEEAEKFLRIFIEMWLERNPVHNPDAKTHVESSDNENQI---LPVSRDTTYEEPTLEILLALLLWVPYLLARKVEVEVMLQGQGSRGVRASPAAPAFCPALDALQQPVFIFLALGFRRLRIEKEGWLKFLLLVELWLSWLTPSEVTVRLAPGKRSQ-DCSLALRWQQSFLKAYVVSNFHFYTTLYVLYMRKVREALGADASMRSVVLVQLARVLKAVGHPDLREALLSVSRTAHELWQAGSQLRGRILLTHHLHRLRLTRSKPCLWRDTAQDAHHLAAELLAIRKRAVKAMEDLEHSWRASLIKVTSTVWLWIKSWVSKGACDSFGLVGRLETLLEKLVVGPGLTGDRGGASSLPS----------------------QIDDVLEELYEIFPSVRMKCQQSLREDEA-DAQLRDPDRRGILLTERGREQLLAGQRACDPSKAVYMGDPLFDPVLASDEYGFLLPWAQRASIWLSKKYKPSWQS-----GEEREMERKRNQHGTGGXXXXXXXXXXXXXGRGDESSIGDEWGHVEIKETKPTDLAPLNLRWMIRRWVVLSAFIVLLAVAALLVMPWGRVQAMLAE 825          
BLAST of NO01G03300 vs. NCBI_GenBank
Match: KUF76562.1 (hypothetical protein AM587_10009197 [Phytophthora nicotianae])

HSP 1 Score: 73.2 bits (178), Expect = 4.500e-9
Identity = 118/542 (21.77%), Postives = 210/542 (38.75%), Query Frame = 0
Query:  245 TARKAHNAYLDLLQAYIYTYFP---RTSTPQFESKNNTLDPIKALALPEDSEKFLRILIEMWLERNPCLNPNTKIHPDTSDAENQFYP----NIPTQP------SLRYEEPSFQVLQALLVLLPHLLARK-VEVELVAQTHGPRVSRAATIPA----FCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKG----QGEAAL---VFRWRETFLKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVP------KSVKKVWFWIWEMVMVYFYHLLDWGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADEQALDAQLRD-----AERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEY 751
            TA    N Y  LL  Y+  + P   R    +F  K           L +DS  FL ILIE WL +N     +  +   T+ A     P    N+P  P      S  Y  PS  +L +LL+ + HLL+       L   ++G +      + +       ++  L+ P++ F  + F R P+ G   T FL + ++WLA++ P     R++ + KG     G+  +      W     ++YV++N+HFYTT+L  F+ +A+E L   A  +  + + + RVL  +N     D L  + +++  L     + +         +   + R++   +G++++        L A++   +    +        +P      +  ++++  +WE                    +                      V ++  +L  V+ I  +  A      +   A    L        ++   LL+ EG  QL  G R C P  A YIGDP+  P+         + W  + S  LS W N ++
Sbjct:  302 TALTRGNPYNVLLLQYLRAFLPDSNRGVKSRFHGK-----------LLKDSNLFLHILIEFWLRQNLISFSDEPVGASTA-APGVIRPPPPANMPVSPFASVYTSTSYMAPSDDLLSSLLLTIIHLLSDSFFPAPLAEDSNGSQGGTGMVVGSGGVYLSRSVTMLRPPLYAFFRLVFSRAPI-GLSPTAFLAITDVWLAYIQP--WHCRSWIESKGVETTPGQDTVPGYTSAW-----ESYVLANYHFYTTLLGAFVERAKE-LDFSAGDERNLQI-VDRVLSVYN----SDLLALLRRASLHL----EKSQPFAMPFSFNRSSNITRTRSGSIGSSSKSKSTAGDALTATQAHVLTFYCKSLGIECTPIPLHDSFHRDAERLFDKLWEAAAA--STATSSTSVHSPADLYQNVSAVFRVSSSKTVDKVAEQVQRLSRMLRRVFEISDAYVASTAHSRSSSAATGGGLESFAPSRDKKLPHLLSREGVFQLQYGIRLCSPDTAEYIGDPMLSPICSYE-----VAWLVRLSYKLSTWLNAQF 806          
BLAST of NO01G03300 vs. NCBI_GenBank
Match: KUF96947.1 (hypothetical protein AM588_10010258 [Phytophthora nicotianae])

HSP 1 Score: 73.2 bits (178), Expect = 4.500e-9
Identity = 118/542 (21.77%), Postives = 210/542 (38.75%), Query Frame = 0
Query:  245 TARKAHNAYLDLLQAYIYTYFP---RTSTPQFESKNNTLDPIKALALPEDSEKFLRILIEMWLERNPCLNPNTKIHPDTSDAENQFYP----NIPTQP------SLRYEEPSFQVLQALLVLLPHLLARK-VEVELVAQTHGPRVSRAATIPA----FCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKG----QGEAAL---VFRWRETFLKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVP------KSVKKVWFWIWEMVMVYFYHLLDWGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADEQALDAQLRD-----AERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEY 751
            TA    N Y  LL  Y+  + P   R    +F  K           L +DS  FL ILIE WL +N     +  +   T+ A     P    N+P  P      S  Y  PS  +L +LL+ + HLL+       L   ++G +      + +       ++  L+ P++ F  + F R P+ G   T FL + ++WLA++ P     R++ + KG     G+  +      W     ++YV++N+HFYTT+L  F+ +A+E L   A  +  + + + RVL  +N     D L  + +++  L     + +         +   + R++   +G++++        L A++   +    +        +P      +  ++++  +WE                    +                      V ++  +L  V+ I  +  A      +   A    L        ++   LL+ EG  QL  G R C P  A YIGDP+  P+         + W  + S  LS W N ++
Sbjct:  446 TALTRGNPYNVLLLQYLRAFLPDSNRGVKSRFHGK-----------LLKDSNLFLHILIEFWLRQNLISFSDEPVGASTA-APGVIRPPPPANMPVSPFASVYTSTSYMAPSDDLLSSLLLTIIHLLSDSFFPAPLAEDSNGSQGGTGMVVGSGGVYLSRSVTMLRPPLYAFFRLVFSRAPI-GLSPTAFLAITDVWLAYIQP--WHCRSWIESKGVETTPGQDTVPGYTSAW-----ESYVLANYHFYTTLLGAFVERAKE-LDFSAGDERNLQI-VDRVLSVYN----SDLLALLRRASLHL----EKSQPFAMPFSFNRSSNITRTRSGSIGSSSKSKSTAGDALTATQAHVLTFYCKSLGIECTPIPLHDSFHRDAERLFDKLWEAAAA--STATSSTSVHSPADLYQNVSAVFRVSSSKTVDKVAEQVQRLSRMLRRVFEISDAYVASTAHSRSSSAATGGGLESFAPSRDKKLPHLLSREGVFQLQYGIRLCSPDTAEYIGDPMLSPICSYE-----VAWLVRLSYKLSTWLNAQF 950          
BLAST of NO01G03300 vs. NCBI_GenBank
Match: XP_002997918.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67756.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 72.0 bits (175), Expect = 9.900e-9
Identity = 120/543 (22.10%), Postives = 207/543 (38.12%), Query Frame = 0
Query:  245 TARKAHNAYLDLLQAYIYTYFP---RTSTPQFESKNNTLDPIKALALPEDSEKFLRILIEMWLERNPCLNPNTKIHPDTSDAENQFYP----NIPTQP------SLRYEEPSFQVLQALLVLLPHLLARK-VEVELVAQTHGPRVSRAATIPA-----FCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRK-----GQGEA-ALVFRWRETFLKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVP------KSVKKVWFWIWEMVMVYFYHLLDWGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADEQALDAQL------RDAERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEY 751
            TA    N Y  LL  Y+  + P   R    +F  K           L +DS  FL ILIE WL +N     +  +   T+ A     P    N+P  P      S  Y  PS  +L +LL+ + HLL+       L   + G +      +          ++  L+ P++ F  + F R P+ G   T FL + ++WLA++ P     R++ + K     GQ         W     ++YV++N+HFYTT+L  F+ +A+E L   A  +  + + + RVL  +N     D L  + +++  L     + +         +     RS+    G++++        L A++   +    +        VP      +  ++++  +WE  +                 +                      V ++  +L  V+ I  +  A      +   A  + L      RD +    LL+ EG  QL  G R C P  A Y+GDP+  P+         + W  + S  +S W N ++
Sbjct:  272 TALTRGNPYNVLLLQYLRAFLPDSNRGVKSRFHGK-----------LLKDSNLFLHILIEFWLRQNLISISDEPVGASTA-APGVIRPPPPANMPASPFASVYTSTSYMAPSDDLLSSLLLTITHLLSDSFFPAPLAEDSSGSQTGAGGMVVGSGGVYLSRSVTMLRPPLYAFFRLVFSRAPI-GLSPTAFLAITDVWLAYIQP--WHCRSWIESKDPAITGQDTVPGYTSAW-----ESYVLANYHFYTTLLGAFVERAKE-LDFSAGDERNLQI-VDRVLSVYN----ADLLTLLRRASLHL----EKSQPFAMPFSFNRSSNFARSRSGSFGSSSKSKSTAGDALTATQAHVLTFYCKSLGIECTPVPLHESFHRDAERLFDKLWEAAVT----SAATSSTSSPADLYHNVSAVFRASSSKTVDKVAEQVQRLSRMLRRVFEISDAYVASTAHSRSSSTATGSGLESFAPSRDKDLPH-LLSREGVFQLQYGMRLCSPDTAEYLGDPMLSPICSYE-----VAWLVRLSYKISTWLNAQF 774          
BLAST of NO01G03300 vs. NCBI_GenBank
Match: XP_024573441.1 (metal ion transporter family [Plasmopara halstedii] >CEG37072.1 metal ion transporter family [Plasmopara halstedii])

HSP 1 Score: 70.5 bits (171), Expect = 2.900e-8
Identity = 111/498 (22.29%), Postives = 193/498 (38.76%), Query Frame = 0
Query:  288 LPEDSEKFLRILIEMWLERN----------PCLNPNTKIHPDTSDAENQFYPNIPTQPSLRYEEPSFQVLQALLVLLPHLLARK------VEVELVAQTHGPRVSRAATIPAFCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKGQGEAALVFRWRETF------LKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTM--KEQARKWTAM-----VPKSVKKVWFWIWEMVMVYFYHLLDWGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADE----QALD--AQLRDAERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEY 751
            L ++S  FL ILIE WL +N              P+  IH    D      P      +  Y  PS  +L +LL+ + HLLA         E  ++    G  V  + T+         L+ P+++F  + F R P++    T FL + E+WLA++ P     R++     + EA  +   R T        ++YV++N+HFYTT+L  F+ +A++ L   +  +P + + + RV+  +N       L  + +++  L       + +   +       L R +    G++++     A E L + +  + T   K      T +       +  ++++  +W   +                 +                      V  I  +L  V+ I  +  A              AL+  A  RD E+   LL+ EG  QL  G R C P  A YIGDP+  P+         + W  + S  +S W N ++
Sbjct:  785 LLKNSSLFLHILIEFWLRQNLVSFSDAPLVATSAPSGVIHSPPPDIMQSVSPFASVYTTTSYMAPSDDLLSSLLLAIIHLLADSFFPAALAEDSVIGSQGGAGVYLSRTV-------TMLRPPLYSFFRLVFSRAPIDFSP-TAFLAITEVWLAYIQP--WYCRSWI-YPTEVEATGIITDRGTISGYTSAWESYVLANYHFYTTLLGAFVARAKD-LDFSSGNEPNLQI-VERVMRIYN----PHLLAILRRASLHL------EKCQPFAIPSSNHTGLTRLRSGSFGSSSKSKSLKACEGLTATQAHVLTFYCKSLGIDLTPVPLHDSFHRDAERLYDKLWATGVT--------AASASSANLYQNISFVFRASSTKTVDRVTEQVQNISRLLRRVFEISDAYVASTVHSYPSSTTGTSALESFAPSRD-EKLPHLLSREGIFQLQHGMRLCSPETAEYIGDPMLSPICSYE-----VVWLVRLSYKVSTWLNMQF 1245          
BLAST of NO01G03300 vs. NCBI_GenBank
Match: POM73433.1 (CorA Metal Ion Transporter (MIT) Family [Phytophthora palmivora var. palmivora])

HSP 1 Score: 68.9 bits (167), Expect = 8.400e-8
Identity = 115/536 (21.46%), Postives = 200/536 (37.31%), Query Frame = 0
Query:  251 NAYLDLLQAYIYTYFPRTSTPQFESKNNTLDPIKALALPEDSEKFLRILIEMWLERNPCLNPNTKIHPDTSDAENQFYPNIP----------TQPSLRYEEPSFQVLQALLVLLPHLLARKVEVELVAQ--THGPRVSRAATIPA-----FCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKGQGEAALVFRWRETF------LKAYVVSNFHFYTTILMLFMRKARE---ALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVP------KSVKKVWFWIWEMVMVYFYHLLDWGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADEQALDAQLRD-----AERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPE 750
            N Y  +L  Y+  + P          N  ++      L +DS  FL ILIE WL +N     +  +   T+ A     P  P             S  Y  PS  +L +LL+ + HLLA       +A+  T G +      +           +  L+ P++ F  + F R P+ G   T FL + ++WLA++ P     R++ + K    AA     R+T        ++YV++N+HFYTT+L  F+ +A+E   ++G +   Q V      RV+  +N     D L  + +++  L     + +         +     R++    G+ ++    +   L A++   +    +        VP      +  ++++  +W   +                 +                      V +I  +L  V+ I  +  A      +   A  + L        +    LL+ EG  QL  G R C P  A YIGDP+  P+         + W  + S  LS W N +
Sbjct:  992 NPYNVVLLQYLRVFLP--------DSNRGVNSRLHRKLLKDSNLFLHILIEFWLRQNLISFSDEPVSASTA-APGVIRPPPPGNMLVSPFASVYTSTSYMAPSDDLLSSLLLTIIHLLADSFFPAPLAEDSTSGSQGGAGGMVVGSGGVYLSRNVTMLRPPLYAFFRLVFSRAPI-GLSSTAFLAITDVWLAYIQP--WHCRSWIESKDPVAAAGTATDRDTLPGYTSAWESYVLANYHFYTTLLGAFVERAKELDFSVGDERNLQIV-----DRVMSVYN----ADLLALLRRASLHL----EKSQPFAMPFSFNRSSNFTRTRSGSFGSTSKSKTSVGDALTATQAHVLTFYCKSLGIECTPVPLHDSFHRDAERLFDKLWGAAVSSAATASTISSVHSPADLYQNVSAVFRASSTKTVDKVAEQVQRISRMLRCVFEISDAYVASTAHSRSSSAATGSSLESFAPSRDKNLPFLLSREGVFQLQHGMRLCSPDMAEYIGDPMLSPICSYE-----VTWLVRLSYKLSTWLNEQ 1497          
BLAST of NO01G03300 vs. NCBI_GenBank
Match: OWZ23291.1 (hypothetical protein PHMEG_0001839 [Phytophthora megakarya])

HSP 1 Score: 68.2 bits (165), Expect = 1.400e-7
Identity = 109/531 (20.53%), Postives = 196/531 (36.91%), Query Frame = 0
Query:  251 NAYLDLLQAYIYTYFPRTSTPQFESKNNTLDPIKALALPEDSEKFLRILIEMWLERNPCLNPNTKIHPDTS---------DAENQFYPNIPTQPSLRYEEPSFQVLQALLVLLPHLLARK-VEVELVAQTHGPRVSRAATIPA-----FCAALDALQQPMFTFLSMAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKGQGEAALV-----FRWRETFLKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRVLEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKPCLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVP------KSVKKVWFWIWEMVMVYFYHLLDWGERRGGMGVGTXXXXXXXXXXXXXXXXXXXXVLQIDAVLEEVYGIFPSVQAKCQRPLADEQALDAQLRD-----AERRGLLLTSEGREQLLSGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEY 751
            N Y  +L  Y+  + P T        N  ++      L +DS  FL ILIE WL +N     +  +   T+           +    P      S  Y  PS  +L +LL+ + HLLA       L     G + +    +           +  L+ P++ F  + F R P+ G   T FL + ++WLA++ P     R++ + K       V          +  ++YV++N+HFYTT+L  F+ +A+E L   A  +  + + + RV+  +N     D L  + +++  L     + +         +     R++    G++++        L A++   +    +        VP      +  ++++  +WE  +                 +                      V ++  +L  V+ I  +  A      +   A    L        +    LL+ EG  QL  G R C P  A YIGDP+  P+         + W  + S  LS W N ++
Sbjct:  100 NPYNVVLLQYLRVFLPDT--------NRGVNSRLHRKLLKDSNLFLHILIEFWLRQNLISFSDEPVSASTAAPGVIRPPPPGKMVVSPFASVYTSTSYMAPSDDLLSSLLLTIIHLLADSFFPAPLAEDASGSQGTAGGMVVGSGGVYLSRNVTMLRPPLYAFFRLVFSRAPI-GLSSTAFLAITDVWLAYIQP--WHCRSWIESKDPAAGTAVGNQDTLPGYTSAWESYVLANYHFYTTLLGAFVERAKE-LDFSAGDERNLQI-VDRVISVYN----ADLLALLRRASLHL----EKSQPFAMPFSFNRSSNFTRTRSGSFGSSSKAKSTAGDALTATQAHVLTFYCKSLGIECTPVPLHDSFHRDAERLFDKLWEAAVTSAATASTTPSVHSPADLYQNVSAVFRASSAKTVDKVAEQVQRLSRMLRRVFEISDAYVASTAHSRSSSAATGVGLESFAPSRDKNLPYLLSREGVFQLQHGMRLCSPDTAEYIGDPMLSPICSYE-----VVWLVRLSYKLSTWLNAQF 604          
The following BLAST results are available for this feature:
BLAST of NO01G03300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 7
Match NameE-valueIdentityDescription
EWM29271.13.500e-19545.76hypothetical protein Naga_100029g11 [Nannochlorops... [more]
KUF76562.14.500e-921.77hypothetical protein AM587_10009197 [Phytophthora ... [more]
KUF96947.14.500e-921.77hypothetical protein AM588_10010258 [Phytophthora ... [more]
XP_002997918.19.900e-922.10conserved hypothetical protein [Phytophthora infes... [more]
XP_024573441.12.900e-822.29metal ion transporter family [Plasmopara halstedii... [more]
POM73433.18.400e-821.46CorA Metal Ion Transporter (MIT) Family [Phytophth... [more]
OWZ23291.11.400e-720.53hypothetical protein PHMEG_0001839 [Phytophthora m... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007989NSK007989Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03300.1NO01G03300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100029g11gene1365Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03300.1NO01G03300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03300 ID=NO01G03300|Name=NO01G03300|organism=Nannochloropsis oceanica|type=gene|length=2725bp
ATGAGCTCCAAAACCACCACCAAGAAGACCGCTATTCCTGCCCGGGACCC
TCTCTCCCCGTTAATCAAAGCTGCCCTAAGTAGTTCGAAAGAATCCGATC
TTAAGGAGGCGTGCGATGTGCTCGGTCGGGAGCTGGCTCAGCCGGGGGGG
GCTACGTATTTCAGCTTCCTAGACCGGTGCTTCGGAATGCATGGTCAGCC
AAGTACAAGGATGAGGATCGACGGGGGATGGGTAAGCAAGTCGTCCAAGC
CTGAGCGCGTCGTGACTCTGCTGACCAGTGAGAACAGGCTGAAATGGGAT
AACGCGTACCGTATGCTGGCTTCTTTTTCTAAGCATGACCCGGGATTTGC
TCTCGATGTAGAAATGCTACCTGTCCGGACCGAGGAATATTTGCGAGGCG
ACCCGCCAGCAGATGTTGAGCGATTGGCCACTGACAATAGCAAGCGCTTG
TACGAGTTTTTCTTCTTTGCCCGCACACGGCCGCATGCTCCGCCTACTGC
CCCCACCACCAGCAGCAGTAGCAGCAGCGGTAGTAGCAATAGTGCCTCGG
AACCCAGGACGACCAAAGCAGGCTTTACTCGATTGCCGTTCATCGTACCG
CACCTCGATTACTACCATTTTATTTTCGCCTATCATGCCGTGTACCCTAA
AATAGGGATAAAgtaagtttgaccgggacgtcggaagaacagtacgtgag
tttcccactcgaaataacctcccgccttggcagcaggcattgataaattg
tcactttcagatatccaatgcgtccacctctcccccccgccttacaaata
catctctgatgtttctccgccacgcaatctcaaacagCACCCCGGTCTCC
CTCGCCTACCAACAAGACCTGGCCTCAGGCGCCATCACGCCCACAGGCCT
CCTGGAAACCGCCCGCAAAGCCCACAATGCCTACCTCGACCTCCTTCAAG
CGTACATCTACACCTACTTCCCCCGCACGAGCACTCCCCAATTCGAGTCC
AAGAACAATACCCTGGACCCCATTAAGGCCCTAGCGCTCCCTGAAGACTC
GGAGAAGTTCCTGCGAATCCTGATAGAAATGTGGCTCGAGCGCAACCCGT
GTCTCAACCCCAACACTAAAATCCATCCCGACACCAGTGATGCCGAAAAT
CAGTTTTATCCCAATATTCCCACCCAACCAAGCCTCCGCTATGAAGAACC
CTCCTTTCAGGTGCTCCAAGCCCTTCTCGTCCTTCTCCCCCACCTCCTCG
CCCGCAAGGTCGAAGTGGAGCTAGTCGCCCAGACCCACGGTCCACGGGTG
AGCCGCGCAGCGACTATCCCCGCATTTTGTGCGGCTTTAGATGCATTACA
GCAGCCGATGTTTACCTTTCTGAGCATGGCTTTTAGAAGACTGCCCCTCG
AGGGTGGGGGCTGGACCAAGTTTTTGATGGTGGTTGAGATCTGGTTAGCG
TGGGTGACGCCCGATGCGCAATTAGCCCGGGCCTTCGCAGACAGGAAAGG
GCAGGGGGAGGCGGCGTTGGTATTTCGGTGGCGGGAGACGTTTTTGAAGG
CGTATGTGGTGAGTAATTTCCATTTCTACACGACCATATTGATGCTGTTT
ATGCGCAAGGCGAGAGAGGCATTGGGAGCAGACGCGGCGAAGCAGCCGGT
GATTTTGTTGCAGCTGCACCGAGTTCTCGAGGCATTCAATCGTACGGGCC
TGAGGGATACTTTGGGAGACGTGTCCAAGTCGGCAGGGGAGTTATGGGCG
AATGGGAATCAGATGCGAGGACGTACGCATATGCTGCATCATTTGCAACG
TTTAAGGTTGATGAGGAGTAAGCCTTGTTTGGTGGGGAACGCCGCGCAGG
ATGCTCACTACTTAGCGGCGGAGTTGTTGGCCTCAAGGAAGAGGACGATT
AGAACGATGAAAGAGCAGGCGAGGAAGTGGACGGCGATGGTTCCTAAGTC
CGTGAAAAAGGTGTGGTTCTGGATTTGGGAGATGGTGATGGTATATTTCT
ACCATTTGTTGGACTGGGGGGAGCGAAGGGGAGGGATGGGGGTTGGAACG
ATGGGTCTTAGTGGTGTAGGAGGTGCTGGAGGAGGGGAGGTTGGAGGGCT
GGCAGGGTTAGTGCTGCAGATTGATGCGGTGCTGGAGGAGGTGTATGGAA
TCTTTCCGTCCGTTCAGGCCAAGTGCCAGCGGCCGTTGGCAGATGAACAA
GCATTGGATGCCCAGCTCCGTGATGCAGAAAGACGGGGTTTGCTGCTAAC
GAGTGAAGGGAGGGAGCAACTGCTGTCGGGGCAGCGGGCGTGTGATCCAA
TGAAGGCGGCTTATATCGGAGATCCGCTTTTTGACCCGGTGTTGAAGTCA
AATGAGTACGGGGCTTTGCTGCCATGGGCCCAGCAGGCGTCGGTGTGGTT
GAGCAAGTGGTGGAATCCTGAGTATGCGACGTGGTGTGCCGTGAGGGAGG
AGGAGAAGAAGGAGGAAGGGAAGGAAAGGGAGGGGGCGAAACAGGGAAGG
GTGACGGCGACGGTGGGGAAGGATTGGGGTCATATGCTGGTGAAGGAGAC
AGAGGGAATCGAAATTACCCCGATTAGCTTGCGTTTTTGCATAGGAGGAT
GTTGTGTGAATAGCGTGGTTATCTTGTTGGCCATGTTTGTGGTGTGGGTG
GTGCTTTCATGGACGACGGCGCATAAATTGCTGCTGCAGAAGGTAGCGAT
GGAGCAGCTCCAGCGAAAGGGCTGA
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protein sequence of NO01G03300.1

>NO01G03300.1-protein ID=NO01G03300.1-protein|Name=NO01G03300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=850bp
MSSKTTTKKTAIPARDPLSPLIKAALSSSKESDLKEACDVLGRELAQPGG
ATYFSFLDRCFGMHGQPSTRMRIDGGWVSKSSKPERVVTLLTSENRLKWD
NAYRMLASFSKHDPGFALDVEMLPVRTEEYLRGDPPADVERLATDNSKRL
YEFFFFARTRPHAPPTAPTTSSSSSSGSSNSASEPRTTKAGFTRLPFIVP
HLDYYHFIFAYHAVYPKIGINTPVSLAYQQDLASGAITPTGLLETARKAH
NAYLDLLQAYIYTYFPRTSTPQFESKNNTLDPIKALALPEDSEKFLRILI
EMWLERNPCLNPNTKIHPDTSDAENQFYPNIPTQPSLRYEEPSFQVLQAL
LVLLPHLLARKVEVELVAQTHGPRVSRAATIPAFCAALDALQQPMFTFLS
MAFRRLPLEGGGWTKFLMVVEIWLAWVTPDAQLARAFADRKGQGEAALVF
RWRETFLKAYVVSNFHFYTTILMLFMRKAREALGADAAKQPVILLQLHRV
LEAFNRTGLRDTLGDVSKSAGELWANGNQMRGRTHMLHHLQRLRLMRSKP
CLVGNAAQDAHYLAAELLASRKRTIRTMKEQARKWTAMVPKSVKKVWFWI
WEMVMVYFYHLLDWGERRGGMGVGTMGLSGVGGAGGGEVGGLAGLVLQID
AVLEEVYGIFPSVQAKCQRPLADEQALDAQLRDAERRGLLLTSEGREQLL
SGQRACDPMKAAYIGDPLFDPVLKSNEYGALLPWAQQASVWLSKWWNPEY
ATWCAVREEEKKEEGKEREGAKQGRVTATVGKDWGHMLVKETEGIEITPI
SLRFCIGGCCVNSVVILLAMFVVWVVLSWTTAHKLLLQKVAMEQLQRKG*
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Synonyms
Publications