NO01G03140, NO01G03140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_015059616.1 (PREDICTED: aquaporin SIP1-2-like [Solanum pennellii]) HSP 1 Score: 89.7 bits (221), Expect = 1.200e-14 Identity = 63/180 (35.00%), Postives = 95/180 (52.78%), Query Frame = 0 Query: 55 VSGGSQVNPSVSVAMFVHGA--ISFPGAIVRILAQLAAGIIAYPLLQKLSPSYVG--VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQASFLDDGEKKSK 228 V GG+ NP+ + A + G S A VR AQ+A + L +L P + + GP L+ + TGA+AE LTF ++T + I + G + ++ LV+AG +YTGP+MNP AFGWA S +K +H+ VYWI+P +GA+LA +F V ++ +K K Sbjct: 64 VLGGAGFNPTGNAAFYAAGLGDDSLVSAAVRCPAQVAGAVAGSLALVELMPKHYHHMLDGPALK--VDVQTGAIAEGVLTF-VITFMIFVIVLRGPESVLLKNWLLTMVTLPLVLAGSNYTGPSMNPANAFGWAYLSNTHKTLEHFYVYWISPFIGAILAAWIFRVLFPPPVEQKPQKQK 240
BLAST of NO01G03140 vs. NCBI_GenBank
Match: NP_001275081.1 (aquaporin SIP1-2-like [Solanum tuberosum] >AFD96388.1 small intrinsic protein-1 [Solanum tuberosum]) HSP 1 Score: 89.4 bits (220), Expect = 1.600e-14 Identity = 69/201 (34.33%), Postives = 104/201 (51.74%), Query Frame = 0 Query: 34 VFGNTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGA--ISFPGAIVRILAQLAAGIIAYPLLQKLSPSYVG--VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQASFLDDGEKKSK 228 +F T +L F L DV+ GG+ NP+ + A + G S A VR AQ+ + L +L P + + GP L+ + TGA+AE LTF ++T + I + G + ++ LV+AG +YTGP+MNP AFGWA S + ++H+ VYWI+P +GA+LA +F+A F E+K K Sbjct: 44 LFITTLIVFLIFLVFGFLGDVL-GGAGFNPTGNAAFYAAGLGDDSLVSAAVRCPAQVVGAVAGSLALMELMPKHYHHMLDGPALK--VDVQTGAIAEGVLTF-VITFMIFVIVLRGPESTLLKNLLLTMVTLPLVLAGSNYTGPSMNPANAFGWAYLSNTHNTWEHFYVYWISPFIGAILAA---WIFRALFPPPVEQKQK 237
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_006298440.1 (aquaporin SIP1-1 [Capsella rubella] >EOA31338.1 hypothetical protein CARUB_v10014512mg [Capsella rubella]) HSP 1 Score: 89.0 bits (219), Expect = 2.100e-14 Identity = 70/190 (36.84%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 36 GNTWT----AWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPG-----AIVRILAQ-LAAGIIAYPLLQKLSPSYVG-VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAP---GQRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLF 212 G TW L F +V + V+ GG+ NP+ S A +V G PG +R+ AQ + A A +++ + Y + GP LQ + TGA+AE L+FG +T L I + G + ++A VVAG YTGPAMNP IAFGWA ++ +DH VYWI+ VGA+ A +LF Sbjct: 39 GITWAPLVILTLMIFVYVSIFTVIFGGASFNPTGSAAFYVAG---IPGDTLFSLAIRLPAQAVGAAGGALAIMEFIPEKYKHMISGPSLQ--VDVHTGAIAETVLSFG-ITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHVYVYWISSFVGALSAALLF 222
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_024441306.1 (aquaporin SIP1-1 [Populus trichocarpa] >PNT05065.1 hypothetical protein POPTR_014G154400v3 [Populus trichocarpa]) HSP 1 Score: 89.0 bits (219), Expect = 2.100e-14 Identity = 61/172 (35.47%), Postives = 88/172 (51.16%), Query Frame = 0 Query: 51 LCDVVSGGSQVNPSVSVAMFVHGA---ISFPGAIVRILAQLAAGIIAYPLLQKLSPS---YVGVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRP------VIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVL 211 L GG+ NP+ ++ ++ G S +R Q A G+ + ++ P YV GGP L+ + TGA+AE LTF LI LA+ V G + ++A GLV+AGG YTGP+MNP A+GWA S + +D + VYWI P +GA LA ++ Sbjct: 61 LIGAACGGASFNPATTITLYTAGLKPDASLMSMALRFPVQAAGGVAGAMAITEVMPKQYRYVLRGGPSLK--VDLHTGAIAEGVLTF----LICLALHFVLLKGPKNFVLKVWLLAVATVGLVMAGGKYTGPSMNPANAYGWAYLSNRHTTWDFFYVYWICPFIGATLAALI 226
BLAST of NO01G03140 vs. NCBI_GenBank
Match: NP_001274290.1 (aquaporin SIP1-2-like [Solanum lycopersicum] >BAO18649.1 small basic intrinsic protein 1;1 [Solanum lycopersicum]) HSP 1 Score: 88.6 bits (218), Expect = 2.800e-14 Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 0 Query: 34 VFGNTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGA--ISFPGAIVRILAQLAAGIIAYPLLQKLSPSYVG--VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQASFLDDGEKKSK 228 +F T ++ F L DV+ GG+ NP+ + A + G S A VR AQ+A + L +L P + + GP L+ + TGA+AE LTF ++T + I + G + ++ LV+AG ++TGP+MNP AFGWA S +K +H+ VYWI+P +GA+LA +F V ++ +K K Sbjct: 44 LFITTLIVFVIFLMFDFLGDVL-GGAGFNPTGNAAFYAAGLGDDSLVSAAVRCPAQVAGAVAGSLALVELIPKHYHHMLDGPALK--VDVQTGAIAEGVLTF-VITFMIFVIVLRGPESVLLKNWLLTMVTLPLVLAGSNFTGPSMNPANAFGWAYLSNTHKTLEHFYVYWISPFIGAILAAWIFRVLFPPPVEQKPQKQK 240
BLAST of NO01G03140 vs. NCBI_GenBank
Match: AGZ15274.1 (putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 66/193 (34.20%), Postives = 103/193 (53.37%), Query Frame = 0 Query: 46 FFFVMLCDVVS---GGSQVNPSVSVAMFVH--GAISFPGAIVRILAQLAAGIIAYPLLQKLSPSYV--GVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQASFLDDGEKKSKS 229 F +++ V+ GG+ NP+ + A + G S A VR AQ + + ++ PS +GGP L+ + TGA+AE LTF +++L+ LAI + G + +++ I +VVAG SYTGP+MNP AFGWA + + ++H+ VYWI P VGA+ A +F +F KK+K+ Sbjct: 51 FILLLIFGVIGDALGGASFNPTGTAAFYAAGLGRDSLVSAAVRFPAQALGAVGGALAIVEVMPSEYKHKLGGPSLK--VDQHTGAIAEGVLTF-IVSLLVLAIILKGPKSPLIKNFLLSTSIVTMVVAGSSYTGPSMNPANAFGWAYVNKRHDTWEHFYVYWICPFVGAIFAGWVFRLFFPHQSKTKVKKTKT 240
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_011098079.1 (aquaporin SIP1-1-like [Sesamum indicum] >XP_011098080.1 aquaporin SIP1-1-like [Sesamum indicum]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 66/179 (36.87%), Postives = 100/179 (55.87%), Query Frame = 0 Query: 42 WLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGA---ISFPGAIVRILAQLA---AGIIAYPLLQKLSPSYVGVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLF 212 +L F F ++ D++ GG+ NP+ + A + GA S A +R AQ A G++A + + ++ VGGP L+ + TGA+AE LTF ++TL L I + G + ++A LVVAG SYTGP+MNP AFGWA + + ++ VYWI+P +GA+LA +F Sbjct: 53 FLLLFIFGIIGDLL-GGATFNPTATAAFYAAGAGGGDSLVSAALRFPAQAAGAVGGVVAILEVMPMQYKHM-VGGPSLK--VDMHTGAIAEGVLTF-IITLAVLIIVLRGPSNPLIRNWLLAVSTVALVVAGSSYTGPSMNPANAFGWAYINNKHNTWEQLYVYWISPFIGAILAAWVF 226
BLAST of NO01G03140 vs. NCBI_GenBank
Match: NP_187059.1 (small and basic intrinsic protein 1A [Arabidopsis thaliana] >Q9M8W5.1 RecName: Full=Aquaporin SIP1-1; AltName: Full=Small basic intrinsic protein 1-1; Short=AtSIP1;1 >AAF26804.1 hypothetical protein [Arabidopsis thaliana] >BAE98575.1 hypothetical protein [Arabidopsis thaliana] >AEE74036.1 small and basic intrinsic protein 1A [Arabidopsis thaliana] >OAP01617.1 SIP1A [Arabidopsis thaliana]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 66/176 (37.50%), Postives = 94/176 (53.41%), Query Frame = 0 Query: 46 FFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPG-----AIVRILAQ-LAAGIIAYPLLQKLSPSYVG-VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAP---GQRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLF 212 F +V + V+ G + NP+ S A +V G PG +R+ AQ + A A +++ + Y +GGP LQ + TGA+AE L+FG +T L I + G + ++A VVAG YTGPAMNP IAFGWA ++ +DH VYWI+ VGA+ A +LF Sbjct: 54 FVYVSIFTVIFGSASFNPTGSAAFYVAGV---PGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQ--VDVHTGAIAETILSFG-ITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLF 223
BLAST of NO01G03140 vs. NCBI_GenBank
Match: KZV21080.1 (hypothetical protein F511_35461 [Dorcoceras hygrometricum]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 66/182 (36.26%), Postives = 98/182 (53.85%), Query Frame = 0 Query: 57 GGSQVNPSVSVAMF---VHGAISFPGAIVRILAQLA---AGIIAYPLLQKLSPSYVGVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQASFLDDGEKKSKSD 230 GG+ NP+ + A + + GA S A +R AQ A G++A + + ++ +GGP L+ + TGA+AE LTF ++T L I I G + ++A LVVAG SYTGP+MNP AFGWA + + ++ + VYWI P VGA+LA +F++ F K KS+ Sbjct: 130 GGATFNPTATAAFYAAGLGGADSLISAAIRFPAQAAGAVGGVLAISEVMPIQYRHM-LGGPYLK--VDLHTGAIAEGVLTF-IITFAVLLIVIKGPRNIVIKNWLLAMSTISLVVAGSSYTGPSMNPANAFGWAYLNNKHNTWEQFYVYWICPFVGAILAA---WIFRSVFPPPSPLKKKSE 304
BLAST of NO01G03140 vs. NCBI_GenBank
Match: OEL17435.1 (Aquaporin SIP1-2 [Dichanthelium oligosanthes]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 68/182 (37.36%), Postives = 100/182 (54.95%), Query Frame = 0 Query: 46 FFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFP---GAIVRILAQLAAGIIAYPLLQKLSPSYVG--VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRPVIAAGIRG-----LVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLF-AVFQA 217 F F +LCD + GG+ NP+ VA F ++ P +R AQ A + + +L P+ +GGP L+ + TGA+AE LTF ++TL L I + G + P+I + LV+AG +YTGP+MNP AFGWA + + ++ + VYWI P +GAVLA +F A+F A Sbjct: 59 FVFNILCDAL-GGASFNPT-GVAAFYAAGLTSPSLFAVALRFPAQAAGAVGGALAISELMPAQYKHMLGGPSLK--VDPHTGAVAELVLTF-VITLAVLWILVKGP--RNPIIKTWMISISTVCLVLAGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAVLAAWIFKALFMA 233 The following BLAST results are available for this feature:
BLAST of NO01G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03140 ID=NO01G03140|Name=NO01G03140|organism=Nannochloropsis oceanica|type=gene|length=1917bpback to top protein sequence of NO01G03140.1 >NO01G03140.1-protein ID=NO01G03140.1-protein|Name=NO01G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bpback to top Synonyms
Publications
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