NO01G03140, NO01G03140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_005853759.1 (aquaporin sip1-2 [Nannochloropsis gaditana CCMP526] >EKU22600.1 aquaporin sip1-2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 401.4 bits (1030), Expect = 1.900e-108 Identity = 203/226 (89.82%), Postives = 216/226 (95.58%), Query Frame = 0 Query: 4 VESPRQLVGAAIQEFFGALLMFLILWPFVGVFGNTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPSYVGVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQASFLDDGEKKSKSD 230 VESPRQLVGAAIQEFFGALLMFL+LWPFVGV G+TWTAW+AHFFFVMLCD+VSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAG++AYPLLQKLSPSYVGVGGP LQDG+STTTGALAEFTLTF LLTLIYLAITI+GAPGQRP+IAAGIR L+VAG YTGPAMNPMIAFGWAVQS AYK FDHYLVYWIAPTVGAVLATVLFAVFQASFLD+ KK+K+D Sbjct: 6 VESPRQLVGAAIQEFFGALLMFLVLWPFVGVLGDTWTAWVAHFFFVMLCDIVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGVVAYPLLQKLSPSYVGVGGPCLQDGVSTTTGALAEFTLTFALLTLIYLAITIIGAPGQRPIIAAGIRCLIVAGTPYTGPAMNPMIAFGWAVQSDAYKTFDHYLVYWIAPTVGAVLATVLFAVFQASFLDE-RKKNKAD 230
BLAST of NO01G03140 vs. NCBI_GenBank
Match: CBJ27953.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 174.5 bits (441), Expect = 3.800e-40 Identity = 94/216 (43.52%), Postives = 132/216 (61.11%), Query Frame = 0 Query: 6 SPRQLVGAAIQEFFGALLMFLILWPFVGVFGNTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPSYV--GVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRPVIAAGIRGLV---VAGGSYTGPAMNPMIAFGWAV-QSGAYKNFDHYLVYWIAPTVGAVLATVLFAVFQ 216 S ++ +G +QE FG+ + ++++PF G+TW+AW+ HFF VM+ D +GG+QVNP++SV F +G +VRI+ Q+ G A+P++ KL PSY +GGP L G ST G EF TF L+ ++Y+A T +G PGQRPVIA GIR L+ G TGPAMNPMIA WAV + +LVYW+AP AV T+L+ + Sbjct: 2 SSQRTLGIFLQETFGSFALLMMVFPFNSFLGDTWSAWIQHFFSVMITDYTNGGAQVNPAMSVGTFFYGWNDQSSLVVRIVGQMVGGFYAFPIMAKLLPSYATSSMGGPTLAAGASTGQGMAWEFGSTFALILIVYVAATQIGLPGQRPVIATGIRALIHLSAVKGGKTGPAMNPMIATAWAVYDKSVTMDQQWFLVYWVAPCAAAVAGTLLWKALE 217
BLAST of NO01G03140 vs. NCBI_GenBank
Match: GAX13763.1 (hypothetical protein FisN_30Lh051 [Fistulifera solaris]) HSP 1 Score: 104.0 bits (258), Expect = 6.400e-19 Identity = 79/221 (35.75%), Postives = 113/221 (51.13%), Query Frame = 0 Query: 11 VGAAIQEFFGALLMFLILWPFVGVFG--NTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPS--YVGVGGPGL---QDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRPVI-----AAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYK-----NFDHYLVYWIAPTVGAVLATVLFAVF 215 +GA EF G L+M + G + AW +H V+ D +SGG VNP+V+ +MF G S+ A VRI AQLA G++A+PL +S + + GGP D L+EF+ TF L +IY+ + +I A IR L+ + GPAMNPM+A W+V K +F HY VYWIAP + AVLA++++ V+ Sbjct: 38 LGAFRHEFVGTLIMVACTFSAGKWIGKESIRVAWTSHLLGVIAADYISGGPHVNPAVTTSMFALGKCSYSEAFVRICAQLAGGLVAFPLFHAVSDTMKWEPFGGPEFNMKDDNDHAAEAFLSEFSATFLLCLVIYILNWEMNFGTYHYIIKQSLTAVAIRALIEFFPT-AGPAMNPMLATTWSVFGVGNKFEYPAHFQHYFVYWIAPCLAAVLASLVYVVY 257
BLAST of NO01G03140 vs. NCBI_GenBank
Match: GAX21850.1 (hypothetical protein FisN_30Hh051 [Fistulifera solaris]) HSP 1 Score: 102.1 bits (253), Expect = 2.400e-18 Identity = 80/221 (36.20%), Postives = 114/221 (51.58%), Query Frame = 0 Query: 11 VGAAIQEFFGALLMFLILWPFVGVFG--NTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPS--YVGVGGPGL---QDGISTTTGALAEFTLTFGLLTLIYLA--ITIVGAPG---QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYK-----NFDHYLVYWIAPTVGAVLATVLFAVF 215 +GA EF G L+M + G + AW +H V+ D +SGG VNP+V+ +MF G S+ A VRI AQLA G++A+PL +S + + GGP D L+EF TF L +IY+ I G ++ + A IR L+ + GPAMNPM+A W+V K +F HY VYWIAP + AVLA++++ V+ Sbjct: 38 LGAFRHEFVGTLVMVACTFSAGKWIGTESIRVAWTSHLLGVIAADYLSGGPHVNPAVTTSMFALGKCSYSEAFVRICAQLAGGLVAFPLFHAVSDTMKWEPFGGPEFNMKDDNDHAAEAFLSEFAATFLLCWVIYILNWEMIFGTYHYIIKQSLTAVAIRALIEFFPT-AGPAMNPMLATTWSVFGVGNKFEYPAHFQHYFVYWIAPCLAAVLASLVYVVY 257
BLAST of NO01G03140 vs. NCBI_GenBank
Match: AEQ27900.1 (hypothetical protein, partial [Ulnaria acus]) HSP 1 Score: 97.1 bits (240), Expect = 7.800e-17 Identity = 73/214 (34.11%), Postives = 107/214 (50.00%), Query Frame = 0 Query: 16 QEFFGALLMFLILWPFVGVFG--NTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPS--YVGVGGPGLQ-DGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRPVI-----AAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAY-----KNFDHYLVYWIAPTVGAVLATVLFAVF 215 QE G+LLM + + G + AW +HF V+ D GG VNP+V+ MF G +S+ A +R+ AQ+A G+IA+P +S + GGP + G L+EF F LL LIY +I A GIR L+ + GPAMNPM+A W V ++ DHY+VYWI+P + A++A V++ ++ Sbjct: 44 QECLGSLLMIVCTFSAGKWIGKDSMQVAWASHFLGVITSDYFGGGPHVNPAVTFNMFCLGKVSYTEAYIRVAAQMAGGLIAFPAFHAISDAMGLTPFGGPEFKLQGDQPVEAFLSEFCAMFLLLMLIYTVNWEYNFGTYHYIIKQSLTAIGIRTLIEVFPT-AGPAMNPMLATTWNVFGVGTTFEFPRDMDHYIVYWISPGISAIVAAVIYVIY 256
BLAST of NO01G03140 vs. NCBI_GenBank
Match: EJK66519.1 (hypothetical protein THAOC_12564 [Thalassiosira oceanica]) HSP 1 Score: 92.4 bits (228), Expect = 1.900e-15 Identity = 71/212 (33.49%), Postives = 110/212 (51.89%), Query Frame = 0 Query: 17 EFFGALLMFLILW---PFVGVFGNTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPSY--VGVGGPGL--QDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG-----QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQS-GAY-KNFDHYLVYWIAPTVGAVLATVLFAVF 215 EF G LLM + + ++G + AW+AH V+ D + GG QVNPSVSV+M+ G IS+ VRI+ +A G++A+PL + + S+ +GGP QD EF L+ +IY+ + ++ + A GIR L+ GPA+NPM+A W + + G Y + HY YW+A GA+ A+VL+ ++ Sbjct: 42 EFVGTLLMIGLTFSPGKWIGK-DSIPVAWVAHAVGVVAADKLGGGQQVNPSVSVSMYALGKISYTEMFVRIMGSMAGGLVAFPLFKLFADSFGLEPLGGPEFDPQDDEEGIAAGFGEFVAMVLLMIVIYVVNWELNFGKAHYWIKQTLTALGIRYLIET-FPRAGPAINPMLATTWYIFAYGEYPTHLGHYFTYWVASAAGAIFASVLYVIY 251
BLAST of NO01G03140 vs. NCBI_GenBank
Match: ESQ49677.1 (hypothetical protein EUTSA_v10021302mg [Eutrema salsugineum]) HSP 1 Score: 92.0 bits (227), Expect = 2.500e-15 Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 0 Query: 46 FFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPG-----AIVRILAQLA-AGIIAYPLLQKLSPSYVG-VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAP---GQRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLF 212 FF+V + VV GG+ NP+ + A +V G PG +R+ AQ A A A +++ + Y + GP LQ + TGA+AE L+FG +T L I + G + ++A VVAG YTGPAMNP IAFGWA + ++ +DH+ VYWI+ VGA+ A ++F Sbjct: 92 FFYVSIFTVVFGGASFNPTGNAAFYVAG---IPGDTLFSLAIRLPAQAAGAAGGALAIMEFIPEKYKHMISGPSLQ--VDVHTGAIAETILSFG-ITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMNSSHNTWDHFYVYWISSFVGALSAALVF 261
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_024015745.1 (aquaporin SIP1-1 [Eutrema salsugineum]) HSP 1 Score: 92.0 bits (227), Expect = 2.500e-15 Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 0 Query: 46 FFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPG-----AIVRILAQLA-AGIIAYPLLQKLSPSYVG-VGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAP---GQRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYKNFDHYLVYWIAPTVGAVLATVLF 212 FF+V + VV GG+ NP+ + A +V G PG +R+ AQ A A A +++ + Y + GP LQ + TGA+AE L+FG +T L I + G + ++A VVAG YTGPAMNP IAFGWA + ++ +DH+ VYWI+ VGA+ A ++F Sbjct: 53 FFYVSIFTVVFGGASFNPTGNAAFYVAG---IPGDTLFSLAIRLPAQAAGAAGGALAIMEFIPEKYKHMISGPSLQ--VDVHTGAIAETILSFG-ITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMNSSHNTWDHFYVYWISSFVGALSAALVF 222
BLAST of NO01G03140 vs. NCBI_GenBank
Match: OEU23058.1 (aquaporin-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 91.7 bits (226), Expect = 3.300e-15 Identity = 74/230 (32.17%), Postives = 108/230 (46.96%), Query Frame = 0 Query: 2 GAVESPRQLVGAAIQEFFGALLMFLILWPFVGVFG--NTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPSY--VGVGGPGLQDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPGQRPVI-----AAGIRGLVVAGGSYTGPAMNPMIAFGWAVQSGAYK-----NFDHYLVYWIAPTVGAVLATVLFAVFQAS 218 G VE R+ A ++EF G +LM + G + AW H V+L D GG VNP+V+V+M+ G ++ A VRI Q+ G++A+PL Q S + GGP + L+EF +F L+ +IY+ +I A IR L+ A + GPAMNPM+A W V K + HY VYW P + +LA + + +F S Sbjct: 35 GCVEH-RKYWSAYVREFIGTILMVGFTFSAGKWIGQDDVMVAWSVHSVGVILADYFGGGQHVNPAVTVSMWALGKCTYTEAFVRIAGQMGGGLVAFPLFQYASEQFNLTPFGGPEFSQE-NDVDAFLSEFFASFLLMWVIYILNWEFNFGSYHYIIKQFLTAVAIRALIEAFPT-AGPAMNPMLATAWYVFGVGNKYEYPNDAVHYFVYWFGPFLAGILAAITYIIFDGS 261
BLAST of NO01G03140 vs. NCBI_GenBank
Match: XP_002176929.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51392.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 90.1 bits (222), Expect = 9.500e-15 Identity = 71/215 (33.02%), Postives = 109/215 (50.70%), Query Frame = 0 Query: 17 EFFGALLMFLILWPFVGVFG--NTWTAWLAHFFFVMLCDVVSGGSQVNPSVSVAMFVHGAISFPGAIVRILAQLAAGIIAYPLLQKLSPS--YVGVGGPGL---QDGISTTTGALAEFTLTFGLLTLIYLAITIVGAPG-----QRPVIAAGIRGLVVAGGSYTGPAMNPMIAFGWAV----QSGAY-KNFDHYLVYWIAPTVGAVLATVLFAVF 215 EFFG +LM + G + AW +H V+ D + GG VNP+V+++M+ G +S+ A VR+ AQL G+I++PL +S + GGP D T L+E+ T L+ IY+ + ++ + A IR L + G GPAMNPM+A W V + Y +F HY VYWIAP + A+ A++L+ ++ Sbjct: 45 EFFGTMLMIGATFSAGKWIGKESLRMAWTSHGLGVIAADYLGGGPHVNPAVTMSMWCLGKVSYTEAFVRVAAQLGGGLISFPLYHAISNAMDLEPFGGPEFNIPDDTKHATEAFLSEYVATMLLMFTIYILNWEMNFGTYHYLIKQSLTAIAIRSL-IEGFPTAGPAMNPMLATAWDVFGVGSTFEYPSDFQHYFVYWIAPWMAAITASMLYVIY 258 The following BLAST results are available for this feature:
BLAST of NO01G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03140 ID=NO01G03140|Name=NO01G03140|organism=Nannochloropsis oceanica|type=gene|length=1917bpback to top protein sequence of NO01G03140.1 >NO01G03140.1-protein ID=NO01G03140.1-protein|Name=NO01G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bpback to top Synonyms
Publications
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