NO01G03110, NO01G03110 (gene) Nannochloropsis oceanica

Overview
NameNO01G03110
Unique NameNO01G03110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2266
Alignment locationchr1:819718..821983 -

Link to JBrowse

Properties
Property NameValue
DescriptionSerine hydroxymethyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:819718..821983 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
BLAST of NO01G03110 vs. NCBI_GenBank
Match: CEM13980.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 562.4 bits (1448), Expect = 1.500e-156
Identity = 275/427 (64.40%), Postives = 338/427 (79.16%), Query Frame = 0
Query:   99 VAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNL------SSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTM--VAHAGEVVALRERV 518
            +A ++ AE +RQ   +ELIASENF S AVLEALGS++TNKYSEGRPGAR+YGGN+++D LERLCE RAL LF L          WGVNVQPYSGSPANFAVYTALL+PHDRIMGLDLP GGHL+HGY   KRRVSATSIYFES+PYRVDP TGLIDY++L++LAL+FRPRL++AG SAYPRDWDY R+R IAD+CGAYLM DMAHISGLV+AG   +PF + DVVTSTTHKSLRGPRSG+IF++  L +AI  AVFP+LQGGPHN+ I ALAVALKEA++ +FR  Y   VK NA+ALA  L   G+ + +NGT+NH++LWD+RP  +TGSK+EKLLE + ++ N+NTI GD++A AP G+R+GTPA+TTRGL E DF  +A  LDE ++LA +IQ      KLVDF   M    +A ++  +R+RV
Sbjct:    1 MAEILAAEERRQAGSLELIASENFVSPAVLEALGSVLTNKYSEGRPGARFYGGNQHIDTLERLCERRALELFGLLPAGEGEEPQWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPDGGHLSHGYATPKRRVSATSIYFESMPYRVDPQTGLIDYDDLERLALVFRPRLLIAGASAYPRDWDYGRMRRIADSCGAYLMADMAHISGLVAAGEAKSPFEHCDVVTSTTHKSLRGPRSGIIFYRSHLKDAIDNAVFPALQGGPHNNNIGALAVALKEANSEAFR-NYAKAVKANAKALASSLLDYGYTLSSNGTDNHIVLWDLRPLNLTGSKLEKLLERMHVTANRNTIPGDRNAVAPRGLRLGTPALTTRGLREDDFRWIATLLDEAVQLACEIQGERQGMKLVDFVAAMDQEPYASQLEGMRQRV 426          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_009036663.1 (hypothetical protein AURANDRAFT_53612 [Aureococcus anophagefferens] >EGB08672.1 hypothetical protein AURANDRAFT_53612 [Aureococcus anophagefferens])

HSP 1 Score: 559.7 bits (1441), Expect = 9.800e-156
Identity = 274/442 (61.99%), Postives = 343/442 (77.60%), Query Frame = 0
Query:   96 DAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYN------EKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKE---LAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGL-QSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            D E+  LI+ E++RQ + IELIASENFAS+A+++ LGS +TNKY+EG PG RYYGGN+ +D +E +C+ARAL  + L ++ WGVNVQPYSGSPANFAVYT LLQPHDRIMGLDLPSGGHLTHG+Y        ++ VSATS+YFESLPY+V   TGL+D++EL K+A +F+P LIV GGSAYPRDWDYA+ REIADA G+ LM DMAHISGLV+    N+PF Y D+VT+TTHKSLRGPRSG+IFFKK+     + I+ AVFP+LQGGPH HQIA +AV LKE + P F+  Y+ QVK+N +A+A  L    G+ + T GT+NHLLLWD+RP GITGSKVEK+ + + I++NKN + GD SA +PGGVR+G PAMTTRGL E DF  VA  L E ++LALKIQA + SKKLVDF K +V +A EV ALRE+V+ FA+ +  P
Sbjct:   19 DTEMYELIEQEKRRQFTSIELIASENFASRAIMDCLGSCLTNKYAEGLPGKRYYGGNEIIDQIENMCKARALEAYRLKTDEWGVNVQPYSGSPANFAVYTGLLQPHDRIMGLDLPSGGHLTHGFYTLDKKTMSRKPVSATSVYFESLPYKVHQTTGLVDFDELAKMAAIFKPALIVCGGSAYPRDWDYAKFREIADANGSLLMMDMAHISGLVATQEANDPFKYCDIVTTTTHKSLRGPRSGIIFFKKDARGFEDKINNAVFPALQGGPHEHQIAGVAVQLKETTKPEFK-GYVQQVKKNIKAMAAKLVDQYGYALATGGTDNHLLLWDLRPAGITGSKVEKICDVVQITLNKNAVPGDVSALSPGGVRIGAPAMTTRGLVEKDFEAVADLLHEAVQLALKIQAAAPSKKLVDFSKALVGNA-EVDALREKVKGFASSFGMP 458          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: GAX15581.1 (glycine hydroxymethyltransferase [Fistulifera solaris])

HSP 1 Score: 559.7 bits (1441), Expect = 9.800e-156
Identity = 285/447 (63.76%), Postives = 343/447 (76.73%), Query Frame = 0
Query:   94 QEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLS------SESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQA-------GSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            Q D EVA LI AE +RQ SG+ELIASENF S +V  ALGS +TNKYSEG+ G RYYGGN Y+D LE LC  RAL LFNL+      +E WGVNVQPYSGSPANFAVYTALL+PHDRIMGLDLPSGGHLTHG+   KR+VSATS+YFES+PY VDP TGL+DY+EL K A +F P+L++AG SAYPR+WDYA++REIAD+ GA  M DMAHISGLV+AG  ++PF Y+DVVTSTTHK+LRGPRSGMIF K++  +AI+ AVFP LQGGPHNHQI ALAVAL+EA  PSFR EY  Q+  NA+AL+ GL   G+ + T GT+NHLLLW+VRP  ++GSKVEK+LE   I+ NKNTI GD SA  PGGVR+GTPA+TTRGL EGDF KVA FL EG +L  ++QA        ++ K  ++  ++  +   E+  LR RVEAFA  +P P
Sbjct:   52 QHDPEVAHLIAAEEQRQRSGLELIASENFVSPSVQAALGSGLTNKYSEGQVGKRYYGGNMYIDQLESLCMQRALELFNLTGHGDDDTEGWGVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGFQTTKRKVSATSVYFESMPYIVDPNTGLLDYDELAKRAQMFMPKLLIAGASAYPREWDYAKMREIADSVGALFMVDMAHISGLVAAGVVDSPFSYADVVTSTTHKTLRGPRSGMIFAKQKYMDAINQAVFPMLQGGPHNHQIGALAVALREAQQPSFR-EYARQIVNNAQALSEGLLKRGYQLATGGTDNHLLLWNVRP--LSGSKVEKVLELAGITTNKNTIAGDTSALNPGGVRLGTPALTTRGLREGDFDKVAEFLHEGYQLTQRVQALTEERYEKAALKNFIELLESDASVQSELGDLRNRVEAFALSFPMP 495          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: OSX81493.1 (hypothetical protein BU14_0014s0043 [Porphyra umbilicalis])

HSP 1 Score: 558.9 bits (1439), Expect = 1.700e-155
Identity = 275/445 (61.80%), Postives = 343/445 (77.08%), Query Frame = 0
Query:   93 AQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKK----------ELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            A+ D E+  L+QAER RQ  GIELIASENF S+AVLE LGS +TNKYSEG PGAR+YGGN+ +D +E LC++RAL+ F LS + WGVNVQPYSGSPANFA YT LL PHDRIMGLDLPSGGHLTHG+Y  K+RVSATSIYFESLPY+VD  TGLIDY+ L+  A  FRP++++AGGSAYPR+WDYAR R +AD  GAYLM DMAHISGLV+ G  ++PF Y+DVVTSTTHKSLRGPR+G+IF++K           +AEAI+ AVFPSLQGGPHNHQI ALAV L E +TP F   Y  QV  NA A A  L   G+ +VT+GT+NHL+LWD+RP G++G+K++ + +A +I++NKN++HGD SA  PGGVR+G+PAMT+RGL E DF ++A FL  G+ +A ++QA  S KKL DF   +  +A +V ALR+ VE+FA  +  P
Sbjct:   73 AETDPEMYELLQAERTRQQRGIELIASENFTSRAVLETLGSCLTNKYSEGYPGARFYGGNEVIDKIESLCQSRALAAFGLSPDEWGVNVQPYSGSPANFAAYTGLLNPHDRIMGLDLPSGGHLTHGFYTAKKRVSATSIYFESLPYKVDSATGLIDYDALESNAAAFRPKVVIAGGSAYPREWDYARFRSVADQSGAYLMVDMAHISGLVATGVVDSPFQYADVVTSTTHKSLRGPRAGVIFYRKTPLAAAGEGVNMAEAINAAVFPSLQGGPHNHQIGALAVQLSEVATPGF-VAYSHQVVANARACAATLMGHGYKLVTDGTDNHLVLWDLRPAGVSGAKMQAVFDACSITLNKNSVHGDTSAMNPGGVRIGSPAMTSRGLVEADFEQIAHFLHRGVVIAQQVQA-ISGKKLKDFLPALEGNA-DVAALRDEVESFAEGFHMP 514          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: OAE18816.1 (hypothetical protein AXG93_313s1130 [Marchantia polymorpha subsp. ruderalis] >PTQ32662.1 hypothetical protein MARPO_0096s0018 [Marchantia polymorpha])

HSP 1 Score: 558.5 bits (1438), Expect = 2.200e-155
Identity = 279/450 (62.00%), Postives = 340/450 (75.56%), Query Frame = 0
Query:   94 QEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYN-EKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKK---------------ELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            + D E+  L++ E+ RQ  GIELIASENF S+AV+EALGS +TNKYSEG PGARYYGGN++VD +E LC ARAL+ F+     WGVNVQPYSGSPANFAVYTALL PHDRIMGLDLPSGGHLTHGYY    +++SATSIYFESLPY+VD  TG IDY  L++ AL +RP+LI++GGSAYPRDWDYARLR IAD CGA LM DMAH SGLV+A   NNPF Y DVVT+TTHKSLRGPR+GMIF++K               +  + I+FAVFPSLQGGPHNHQIAALAVALK+A+TP F+ EY  QVK NA A+   L   G+ +VT+GT+NHL+LWD+RP G+TG+KVE++ E   I++NKN + GD SA APGGVR+G PAMT+RGL E DF ++A FL++ + + L +Q     K L DF K +V +  E+ AL+E VE FA  Y  P
Sbjct:   14 EADDEIFYLVEQEKMRQYKGIELIASENFTSQAVIEALGSALTNKYSEGLPGARYYGGNEFVDQIENLCRARALTAFHCDPAKWGVNVQPYSGSPANFAVYTALLNPHDRIMGLDLPSGGHLTHGYYTAHGKKISATSIYFESLPYKVDFATGYIDYARLEEKALDYRPKLIISGGSAYPRDWDYARLRTIADKCGAMLMCDMAHFSGLVAAQEVNNPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPAKKGQIGEVNYDYEDKINFAVFPSLQGGPHNHQIAALAVALKQANTPMFK-EYAKQVKANAAAIGAALMKKGYKMVTDGTDNHLVLWDLRPLGLTGNKVERVCELAHITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLKEKDFEQIADFLEQAVNITLSVQK-EYGKLLKDFNKGLVDNK-EIAALKEAVEKFAASYDMP 460          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: OEL24705.1 (Serine hydroxymethyltransferase 4 [Dichanthelium oligosanthes])

HSP 1 Score: 557.4 bits (1435), Expect = 4.800e-155
Identity = 281/451 (62.31%), Postives = 344/451 (76.27%), Query Frame = 0
Query:   93 AQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNE-KRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKK---------------ELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            ++ D EV  LI+ E++RQ +GIELIASENF S AV+EALGS +TNKYSEG PGARYYGGN+ +D +E LC ARAL+ F+L    WGVNVQPYSGSPANFA YT LLQPHDRIMGLDLPSGGHLTHGYY    +++SATSIYFESLPY+V   TG +DY+ L++ A+ FRP+LI+ GGSAYPRDWDYARLR IAD CGA L+TDMAHISGLV+A    NPF YSDVVT+TTHKSLRGPRSGMIF++K               +  + I+FAVFPSLQGGPHNHQIAALAVALK+A +P F+  YI QVK NA AL   L S G+ +VT+GTENHL+LWD+RP G+TG+KVE L +  +I++NKN + GD SA +PGGVR+GTPAMT+RGL E DFV++A +L + + + LK+Q     K L DF+K +V +  ++  LR  VE FAT +  P
Sbjct:   88 SEADPEVYDLIEREKRRQRAGIELIASENFTSLAVMEALGSPLTNKYSEGMPGARYYGGNEVIDEVEELCRARALAAFHLDPALWGVNVQPYSGSPANFAAYTGLLQPHDRIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSDTGYVDYDRLEEKAMDFRPKLIICGGSAYPRDWDYARLRSIADKCGAMLLTDMAHISGLVAAQEALNPFEYSDVVTTTTHKSLRGPRSGMIFYRKGPKPPKKGQPEGALYDYEDKINFAVFPSLQGGPHNHQIAALAVALKQAMSPGFK-AYIQQVKANAVALGNHLMSKGYKLVTDGTENHLVLWDLRPLGLTGNKVEMLCDLCSITLNKNAVFGDSSALSPGGVRIGTPAMTSRGLVEKDFVQIAEYLHQAVTICLKVQE-EHGKLLKDFKKGLVNNK-DIENLRAEVEKFATSFEMP 535          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_009035050.1 (hypothetical protein AURANDRAFT_53011 [Aureococcus anophagefferens] >EGB10234.1 hypothetical protein AURANDRAFT_53011 [Aureococcus anophagefferens])

HSP 1 Score: 556.6 bits (1433), Expect = 8.300e-155
Identity = 272/442 (61.54%), Postives = 343/442 (77.60%), Query Frame = 0
Query:   96 DAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYN------EKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKE---LAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGL-QSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            D+E+  LI+ E++RQ + IELIASENFAS+A+++ LGS +TNKY+EG PG RYYGGN+ +D +E +C++RAL  + L ++ WGVNVQPYSGSPANFAVYT LLQPHDRIMGLDLPSGGHLTHG+Y        ++ VSATS+YFESLPY+V   TGL+D++EL K+A +F+P LIV GGSAYPRDWDYA+ REIADA G+ LM DMAHISGLV+    N+PF Y D+VT+TTHKSLRGPRSG+IFFKK+     + I+ AVFP+LQGGPH HQIA +AV LKE + P F+  Y+ QVK+N +A+A  L    G+ + T GT+NHLLLWD+RP GITGSKVEK+ + + I++NKN + GD SA +PGGVR+G PAMTTRGL E DF  VA  L E ++LALKIQA + SKKLVDF K +  +A EV ALRE+V+ FA+ +  P
Sbjct:   19 DSEMYELIEQEKRRQFTSIELIASENFASRAIMDCLGSCLTNKYAEGLPGKRYYGGNEIIDQIENMCKSRALEAYRLKTDEWGVNVQPYSGSPANFAVYTGLLQPHDRIMGLDLPSGGHLTHGFYTLDKKTMSRKPVSATSVYFESLPYKVHQTTGLVDFDELAKMAAIFKPALIVCGGSAYPRDWDYAKFREIADANGSLLMMDMAHISGLVATQEANDPFQYCDIVTTTTHKSLRGPRSGIIFFKKDARGFEDKINNAVFPALQGGPHEHQIAGVAVQLKETTKPEFK-GYVQQVKKNIKAMAAKLVDQYGYALATGGTDNHLLLWDLRPAGITGSKVEKICDVVQITLNKNAVPGDVSALSPGGVRIGAPAMTTRGLVEKDFEAVADLLHEAVQLALKIQAAAPSKKLVDFSKALEGNA-EVDALREKVKGFASSFGMP 458          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_004993173.1 (serine hydroxymethyltransferase [Salpingoeca rosetta] >EGD74273.1 serine hydroxymethyltransferase [Salpingoeca rosetta])

HSP 1 Score: 555.8 bits (1431), Expect = 1.400e-154
Identity = 275/438 (62.79%), Postives = 331/438 (75.57%), Query Frame = 0
Query:   96 DAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYN------EKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            D ++  +IQ E++RQ SG+ELIASENF S+AV + LGS +TNKYSEG PGARYYGG +++D +E LC  RAL  F LS E WGVNVQPYSGSPAN AVYTALL PHDRIMGLDLPSGGHLTHGYY+        +++SATS++FESLPY V   TGLIDY ELQK   +F+P+LI+ GGSAYPRDWDY R REIAD CGAYLM DMAHISGLV+A   N+PF Y DVVTSTTHKSLRGPR+G+IFFKKEL   I+FAVFP LQGGPH HQIA +A  LKE  TP F+Q YI QVK+N  ALA  L  +GHV+ T G++NHL+LWD+RPHGITGSK+EK+ +   I++NKN I GD+SA APG VR+GTPA+TTRG  E  F +VA FL+  L++A+ +Q     K L  F   +  +A E+  L + V AFA Q+P P
Sbjct:   59 DPDLFEMIQHEKERQRSGLELIASENFTSRAVNDCLGSCLTNKYSEGLPGARYYGGQQFIDKIENLCRDRALQAFRLSPEQWGVNVQPYSGSPANLAVYTALLNPHDRIMGLDLPSGGHLTHGYYSYNARDGTTKKISATSVFFESLPYCVSAETGLIDYVELQKRVDVFKPKLIICGGSAYPRDWDYKRFREIADTCGAYLMCDMAHISGLVAAQEANDPFEYCDVVTSTTHKSLRGPRAGIIFFKKELEAKINFAVFPMLQGGPHEHQIAGVATQLKEVMTPEFKQ-YIQQVKKNTRALADALTGMGHVLATGGSDNHLILWDLRPHGITGSKMEKVCDKAEITLNKNAILGDRSALAPGAVRIGTPALTTRGFKEEHFRQVAEFLNRALKIAIDVQ-NEHGKPLKTFIPALEGNA-EIEQLHKDVAAFARQFPLP 493          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: GAX19111.1 (glycine hydroxymethyltransferase [Fistulifera solaris])

HSP 1 Score: 555.4 bits (1430), Expect = 1.800e-154
Identity = 283/447 (63.31%), Postives = 341/447 (76.29%), Query Frame = 0
Query:   94 QEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLS------SESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQA-------GSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            Q D EVA LI +E +RQ SG+ELIASENF S +V  ALGS +TNKYSEG+ G RYYGGN Y+D LE LC  RAL LFNL+       E WGVNVQPYSGSPANFAVYTALL+PHDRIMGLDLPSGGHLTHG+   KR+VSATS+YFES+PY V+P TGL+DY+EL K A +F P+L++AG SAYPR+WDYA++R IAD+ GA  M DMAHISGLV+AG  ++PFPY+DVVTSTTHK+LRGPRSGMIF K++  +AI+ AVFP LQGGPHNHQI ALAVAL+EA  PSFR EY  QV  NA+AL+ GL   G+ + T GT+NHLLLW+VRP  ++G+KVEK+LE   I+ NKNTI GD SA  PGGVR+GTPA+TTRGL EGDF KVA FL EG +LA ++Q         ++ K  ++  +   +   E+  LR RVEAFA  +P P
Sbjct:   87 QHDPEVAHLIASEEQRQRSGLELIASENFVSPSVQAALGSGLTNKYSEGQVGKRYYGGNVYIDQLESLCMQRALELFNLTDHEDNDDEGWGVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGFQTTKRKVSATSVYFESMPYIVNPSTGLLDYDELAKRAQMFMPKLLIAGASAYPREWDYAKMRGIADSVGALFMVDMAHISGLVAAGVVDSPFPYADVVTSTTHKTLRGPRSGMIFAKQKYMDAINQAVFPMLQGGPHNHQIGALAVALREAQQPSFR-EYARQVVNNAQALSEGLLERGYQLATGGTDNHLLLWNVRP--LSGAKVEKVLELAGITTNKNTIAGDTSALNPGGVRLGTPALTTRGLREGDFDKVAQFLHEGYQLAQRVQGLTEERYEKAALKNFIELLEADASIQSELDDLRNRVEAFALSFPMP 530          
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_005537435.1 (serine hydroxymethyltransferase, cytosolic [Cyanidioschyzon merolae strain 10D] >BAM81399.1 serine hydroxymethyltransferase, cytosolic [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 555.1 bits (1429), Expect = 2.400e-154
Identity = 276/433 (63.74%), Postives = 336/433 (77.60%), Query Frame = 0
Query:   96 DAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEK-RRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528
            D EV  LI+AE++RQ  G+ELIASENF S+AV+EALGS  TNKYSEG PG RYYGG + VD LERL + RALSLF L  + W VNVQPYSGSPANFAVYTALL+PHDRIMGL LPSGGHLTHG+Y  K +R+SATSIYFESLPY+V P TG +DY+ L++LALL+RPRLI+ G SAY RDWDYAR+REIAD  GA LM DMAH SGLV+AG   +PFP+ DVVT+TTHKSLRGPR GMIF +++    I+ AVFP  QGGPHN  +AAL VALKEA TP FR  Y  QV+ NA+ALA  LQ+ G+ IVT GT+NHL+LWD+RP G+TG+KV+KL + I I++N N + GD +A +PGGVR+GTPA+T+RG  E DF +VA FL + ++L LKIQ   S KKL DFE+ +     E+  LR++V AFA ++P P
Sbjct:   32 DPEVVTLIRAEKQRQAGGLELIASENFTSRAVMEALGSCFTNKYSEGYPGKRYYGGTEVVDELERLVQQRALSLFGLDPQEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLGLPSGGHLTHGFYTAKGKRISATSIYFESLPYQVHPQTGYVDYDRLEELALLYRPRLIICGASAYARDWDYARMREIADKAGAMLMCDMAHYSGLVAAGELTSPFPFCDVVTTTTHKSLRGPRQGMIFCRRQYEADINEAVFPGCQGGPHNATMAALGVALKEAMTPEFR-AYQQQVRANAKALAGALQARGYTIVTGGTDNHLVLWDLRPEGLTGNKVQKLCDQINITLNMNAVPGDTNALSPGGVRLGTPALTSRGFREKDFEQVAEFLHQAVQLCLKIQK-DSGKKLADFERALEGRP-ELATLRDQVRAFALRFPMP 461          
The following BLAST results are available for this feature:
BLAST of NO01G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEM13980.11.500e-15664.40unnamed protein product [Vitrella brassicaformis C... [more]
XP_009036663.19.800e-15661.99hypothetical protein AURANDRAFT_53612 [Aureococcus... [more]
GAX15581.19.800e-15663.76glycine hydroxymethyltransferase [Fistulifera sola... [more]
OSX81493.11.700e-15561.80hypothetical protein BU14_0014s0043 [Porphyra umbi... [more]
OAE18816.12.200e-15562.00hypothetical protein AXG93_313s1130 [Marchantia po... [more]
OEL24705.14.800e-15562.31Serine hydroxymethyltransferase 4 [Dichanthelium o... [more]
XP_009035050.18.300e-15561.54hypothetical protein AURANDRAFT_53011 [Aureococcus... [more]
XP_004993173.11.400e-15462.79serine hydroxymethyltransferase [Salpingoeca roset... [more]
GAX19111.11.800e-15463.31glycine hydroxymethyltransferase [Fistulifera sola... [more]
XP_005537435.12.400e-15463.74serine hydroxymethyltransferase, cytosolic [Cyanid... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008013NSK008013Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03110.1NO01G03110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537398gene_312Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GLYM2gene1384Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03110.1NO01G03110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03110 ID=NO01G03110|Name=NO01G03110|organism=Nannochloropsis oceanica|type=gene|length=2266bp
CTCCAGTGCTTGGCTGGTGCCTGTATTATGGTACGGGATTGAGCGGGCGT
CTGTTAGTGTCTTGGTAAGTAGGTCGCGACGGGCGTGACTGAAGAGGAAG
GAGACGTTGGGGGTGTTGCCGTTTGGGGTACGTGACTGTTTCAAGAGCTA
ACTTGGAAAAGCTCGCGGAGGCCCAAAAAATCCACGATACGGTTGAGTTT
TGTGGTGTGATGATCAAGTACCGTGACGGGCGAGTGCAAAAGTCTCACAG
ATGCAGCGTCGTGTGCATGTGAGGGATTTTTCGATGTGAGGGAGCGACTC
CTACTCGGACCCTTTTTCTCGAGACGCCTCAACCGCTGAGTTGAACAGGC
AGGCGATGACTCATTCAATGCACACCACCACATAGTAAGCACAGCTGCCC
TACAAAGAGCCCGAGCACAGAAAGGTCCAGATTACAAGCAATATGAGCAG
AGCTAGTCAAAGgtaagccagctcccagctcctccctccctagcctcccc
accccatctcatctcatcatcactcgcctctcacaccccacgccaataca
aaagACGGCAGCTTCCCGTGCTTGGGTTGGTAGCTGGGTGCTTCATCTCA
TTTGCCAGTGCCTTTGCCGTCCCACCCTCGTATTGGGCGCCATTGTCGTC
TTCAGTCGCCGCCCCAGCAGAAGTCACGAGCACCACAACAGCTTCGCAGT
GCCCCCTCCCTACGCCACAGAGTGCCAGGTCATACAACAATATCCCACCC
ACCAACGCAGCTTCCGTCTCGACTGATGCCACCACTACAGCAGCAGCATC
GTCCGTTCTCGCGCAGGAGGATGCGGAAGTGGCGGCTCTCATCCAAGCAG
AGCGGAAGCGACAAATTTCGGGCATTGAATTGATTGCAAGCGAGAATTTT
GCCTCCAAAGCTGTTTTGGAAGCCTTGGGCTCCATCATGACCAACAAGTA
CTCCGAAGGCCGACCAGGTGCCCGCTATTATGGAGGAAACAAGTACGTGG
ATGCCTTGGAGAGGCTGTGTGAGGCGAGGGCGTTGTCGCTTTTTAATCTG
TCTTCTGAGAGCTGGGGCGTGAACGTGCAACCCTACTCGGGTAGCCCAGC
CAATTTCGCTGTCTATACTGCGTTGCTCCAACCCCATGACCGCATAATGG
GCCTGGATTTGCCATCGGGGGGGCATTTGACACACGGATACTACAACGAA
AAGCGGCGGGTCTCGGCGACCTCTATATATTTTGAGAGCTTGCCTTATCG
CGTGGACCCCGTCACAGGTCTAATTGATTACGAGGAACTTCAAAAGCTCG
CCTTGCTTTTCCGACCCCGCCTTATTGTGGCGGGTGGAAGTGCCTACCCG
CGTGATTGGGATTACGCACGTTTGCGAGAGATTGCTGATGCTTGCGGTGC
TTACTTGATGACAGATATGGCTCACATAAGTGGCTTGGTCTCCGCGGGGG
CGTGCAACAACCCTTTCCCCTACTCCGACGTTGTCACTTCTACCACGCAC
AAGTCTTTGCGTGGGCCTCGTTCAGGCATGATTTTTTTCAAAAAGGAGCT
GGCGGAGGCGATTCATTTTGCTGTCTTTCCCTCTTTGCAAGGGGGGCCGC
ACAACCACCAGATTGCCGCCTTGGCCGTGGCGCTGAAGGAGGCGTCCACT
CCCTCTTTTCGGCAAGAGTACATTTGGCAGGTGAAACGCAATGCAGAGGC
GCTTGCGATGGGGCTTCAGAGTTTGGGACATGTCATCGTGACGAATGGCA
CGGAGAATCATCTCTTATTGTGGGATGTGCGTCCACATGGTATAACGGGC
TCCAAAGTGGAGAAGCTATTAGAGGCTATTGCCATTTCGGTGAATAAAAA
TACAATCCATGGGGATAAAAGTGCTAGTGCTCCAGGTGGGGTTAGGGTAG
GGACCCCAGCCATGACTACACGGGGGTTGACAGAAGGCGATTTCGTCAAG
GTGGCGGCCTTCCTGGATGAAGGCTTACGGTTGGCTTTGAAGATACAGGC
GGGAAGTAGCAGTAAGAAATTGGTGGATTTTGAAAAGACAATGGTTGCGC
ATGCGGGCGAAGTGGTAGCGTTAAGAGAGAGGGTGGAGGCGTTTGCGACA
CAATATCCGTTTCCATCGTGAGGAGGGGAGGGGGGCCAGGGAAGGAAAAA
AGGGGAAAATGACAAAGCTTTTGAGAGGCAGTAACGAGAGATGCACGCCC
ACACCCAGCAGAACAAGAAGAGATGTAACGAAATGTATATAAATGTAAAG
AAGCCGCTGTTTTCAT
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protein sequence of NO01G03110.1

>NO01G03110.1-protein ID=NO01G03110.1-protein|Name=NO01G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=529bp
MSRASQRRQLPVLGLVAGCFISFASAFAVPPSYWAPLSSSVAAPAEVTST
TTASQCPLPTPQSARSYNNIPPTNAASVSTDATTTAAASSVLAQEDAEVA
ALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYG
GNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQP
HDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYE
ELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISG
LVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPS
LQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHV
IVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAP
GGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFE
KTMVAHAGEVVALRERVEAFATQYPFPS*
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Synonyms
Publications