NO01G03110, NO01G03110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03110 vs. NCBI_GenBank
Match: EWM29233.1 (serine hydroxymethyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 837.4 bits (2162), Expect = 2.400e-239 Identity = 426/528 (80.68%), Postives = 461/528 (87.31%), Query Frame = 0 Query: 1 MSRASQRRQLPVLGLVAGCFISFASAFAVPPSYWAPLSSSVAAPAEVTSTTTASQCPLPTPQSARSYNNIPPTNAASVSXXXXXXXXXXXXXAQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFPS 529 M R +R QL +LGL+ C+ S A+AFAVPP YW PLS SVAA AE+ + +T SQC S ++ T AASV A ED EVA +IQAER RQISGIELIASENFASKAVLEALGS+MTNKYSEGRPGARYYGGN++VDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALL+PHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGL+DY+ELQKLA LFRPRLIVAGGSAYPRDWDYARLR IADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFF+KELAE +HFAVFPSLQGGPHNHQIAALAVALKEA+ PSFRQ+YIW+VKRNAEALAM LQ LGH +VTNGTENHLLLWD+RPHGITGSKVEKLLEA+ ISVNKNTIHGDKSAS+PGGVRVGTPAMTTRGLTE DF+ VAAFLD+GLRLALK+QAG+ SKKLVDFE+ M AH EV ALR+RV+ FA+ + FPS Sbjct: 1 MERGGRRWQLAILGLMGWCWNSCAAAFAVPPCYWPPLSLSVAAAAELAAPSTQSQCRASPHGSRLAHAQKSSTVAASV----LSGHEAPSILADEDPEVAHIIQAERIRQISGIELIASENFASKAVLEALGSVMTNKYSEGRPGARYYGGNEHVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLEPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLVDYDELQKLASLFRPRLIVAGGSAYPRDWDYARLRAIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFRKELAEQVHFAVFPSLQGGPHNHQIAALAVALKEAAAPSFRQDYIWRVKRNAEALAMELQRLGHSVVTNGTENHLLLWDMRPHGITGSKVEKLLEAVGISVNKNTIHGDKSASSPGGVRVGTPAMTTRGLTERDFLHVAAFLDDGLRLALKVQAGADSKKLVDFERAMQAHEQEVRALRDRVQHFASNFSFPS 524
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_005773799.1 (hypothetical protein EMIHUDRAFT_424674 [Emiliania huxleyi CCMP1516] >EOD21370.1 hypothetical protein EMIHUDRAFT_424674 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 593.6 bits (1529), Expect = 6.100e-166 Identity = 297/436 (68.12%), Postives = 351/436 (80.50%), Query Frame = 0 Query: 94 QEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDM--AHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 +ED V LI+AE +RQ G+ELIASENFAS AV EALGS+MTNKYSEG PGARYYGGN++VDALERLC+ARAL LF L + WGVNVQPYSGSPANFA +TALL+PHDRIMGLDLPSGGHLTHGYYNE+RRVSATSIYFESLPY V TGLIDY+ L++ A LFRP+L++AG SAYPRDWDYAR+R IAD+ GA LM DM AHISGLV+A +PF + DVVTSTTHKSLRGPR+G+IF++K A++FAVFP LQGGPHNHQIAALAVAL+EA P+FR EYI +VK NA+ALA L + G+ IVT GT+NHL+LWD+RP +TGSK+EKL EA+ I++NKN + GD SA+ PGGVR+GTPA+TTRG E DFV+VA +L E + LAL +Q S + KL DF M A V LRERV AFAT++P P Sbjct: 49 REDGAVWELIEAEGRRQRDGLELIASENFASAAVREALGSVMTNKYSEGLPGARYYGGNEHVDALERLCQARALELFGLDPDEWGVNVQPYSGSPANFAAFTALLEPHDRIMGLDLPSGGHLTHGYYNERRRVSATSIYFESLPYEVSAETGLIDYDGLEERARLFRPKLLIAGASAYPRDWDYARMRRIADSVGALLMNDMAHAHISGLVAAEQAADPFEHCDVVTSTTHKSLRGPRAGVIFYRKRFESAVNFAVFPCLQGGPHNHQIAALAVALREAQQPAFR-EYIRRVKANAKALAAALVARGYTIVTGGTDNHLVLWDLRPQRLTGSKLEKLAEAVGITLNKNAVRGDVSAATPGGVRIGTPALTTRGFGEADFVRVAEYLHEAVELALALQQRSGT-KLKDFVAEMEAEPA-VADLRERVRAFATEFPMP 481
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_005792856.1 (serine hydroxymethyltransferase [Emiliania huxleyi CCMP1516] >EOD40427.1 serine hydroxymethyltransferase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 593.6 bits (1529), Expect = 6.100e-166 Identity = 297/436 (68.12%), Postives = 351/436 (80.50%), Query Frame = 0 Query: 94 QEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDM--AHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 +ED V LI+AE +RQ G+ELIASENFAS AV EALGS+MTNKYSEG PGARYYGGN++VDALERLC+ARAL LF L + WGVNVQPYSGSPANFA +TALL+PHDRIMGLDLPSGGHLTHGYYNE+RRVSATSIYFESLPY V TGLIDY+ L++ A LFRP+L++AG SAYPRDWDYAR+R IAD+ GA LM DM AHISGLV+A +PF + DVVTSTTHKSLRGPR+G+IF++K A++FAVFP LQGGPHNHQIAALAVAL+EA P+FR EYI +VK NA+ALA L + G+ IVT GT+NHL+LWD+RP +TGSK+EKL EA+ I++NKN + GD SA+ PGGVR+GTPA+TTRG E DFV+VA +L E + LAL +Q S + KL DF M A V LRERV AFAT++P P Sbjct: 49 REDGTVWELIEAEGRRQRDGLELIASENFASAAVREALGSVMTNKYSEGLPGARYYGGNEHVDALERLCQARALELFGLDPDEWGVNVQPYSGSPANFAAFTALLEPHDRIMGLDLPSGGHLTHGYYNERRRVSATSIYFESLPYEVSAETGLIDYDGLEERARLFRPKLLIAGASAYPRDWDYARMRRIADSVGALLMNDMAHAHISGLVAAEQAADPFEHCDVVTSTTHKSLRGPRAGVIFYRKRFESAVNFAVFPCLQGGPHNHQIAALAVALREAQQPAFR-EYIRRVKANAKALAAALVARGYTIVTGGTDNHLVLWDLRPQRLTGSKLEKLAEAVGITLNKNAVRGDVSAATPGGVRIGTPALTTRGFGEADFVRVAEYLHEAVELALALQQRSGT-KLKDFVAEMEAEPA-VADLRERVRAFATEFPMP 481
BLAST of NO01G03110 vs. NCBI_GenBank
Match: KOO25971.1 (serine hydroxymethyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 584.3 bits (1505), Expect = 3.700e-163 Identity = 289/435 (66.44%), Postives = 348/435 (80.00%), Query Frame = 0 Query: 93 AQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 +++D EV +LI+ E RQ G+ELIASENF S AV EALGS +TNKYSEG PGARYYGGN+++DA+ERLC+ RAL L+ LS + WGVNVQPYSGSPANFA YTALLQPHDRIMGLDLPSGGHLTHGYY+ K+++SATSIYFESLPY VD TGL+DY+ L+ A LFRP+LI+AG SAYPRDWDY R+R+IAD GAYL+ DMAHISGL +A C+NPF ++DVVTSTTHKSLRGPR+G+IF++K+ A++ AVFP+LQGGPHNHQI ALAVAL+EA+ P F +YI VK NA+ALA L S G+ IVT GT+NHL+LWD+RP G+TGSK+EKL EA+ IS+NKN + GD SA PGGVRVGTPAMTTRGL E DF VA L +L+L++QA S KL DF + A EV ALRERV FA+++P P Sbjct: 39 SKQDPEVCSLIEKEAARQRDGLELIASENFVSPAVREALGSCLTNKYSEGLPGARYYGGNEHIDAIERLCQKRALDLYGLSPDEWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYSPKKKISATSIYFESLPYEVDATTGLVDYDGLEARARLFRPKLIIAGASAYPRDWDYGRMRQIADEVGAYLLNDMAHISGLAAARECHNPFEHADVVTSTTHKSLRGPRAGVIFYRKKFEAAVNGAVFPALQGGPHNHQIGALAVALREAAAPEF-GDYIRSVKANAKALARKLVSHGYEIVTGGTDNHLVLWDLRPLGLTGSKLEKLCEAVHISLNKNAVRGDTSALTPGGVRVGTPAMTTRGLNEADFEVVADHLHAAAQLSLQLQA-LSGPKLADFVHEIEGSA-EVRALRERVTEFASKFPMP 470
BLAST of NO01G03110 vs. NCBI_GenBank
Match: CBN76138.1 (serine hydroxymethyltransferase 2 [Ectocarpus siliculosus]) HSP 1 Score: 581.3 bits (1497), Expect = 3.100e-162 Identity = 301/466 (64.59%), Postives = 357/466 (76.61%), Query Frame = 0 Query: 93 AQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKR----------------------------RVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKE--LAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVK-VAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 ++ D EV +I AER+RQ+ IELIASENFAS AVLEALGSIMTNKYSEG PG RYYGGN+ VD +E LC+ RALSLF L W VNVQPYSGSPANFAVYTALL+PHDRIMGLDLPSGGHLTHGYY++KR +VSATSIYFESLPY+VD TGLIDYE L++ A LFRP+LI+AG SAY R+WDYAR+R+IAD GAYLMTDMAHISGLV+AG N+PFP+S VVTSTTHKSLRGPRSG+IF ++ + + + FAVFP+LQGGPHNHQIAALA ALKEA++P F+ YI +VK NA+ALA GL++ GH + T+GT+NHLLLWD+RP G+TGSK+EKLLEA +IS NKNT++GDKSA++PGGVR+GTPAMTTRGL E DF + VA FLD LA +Q + SKKL F M A G V L+ VEAFA ++ +P Sbjct: 67 SETDPEVWEIITAERRRQVCSIELIASENFASVAVLEALGSIMTNKYSEGLPGKRYYGGNEQVDRMETLCQDRALSLFGLDPAEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYSDKRKERLAIGDRSCGNNAPSSRGRVVNGLTAKVSATSIYFESLPYQVDQETGLIDYEGLERQARLFRPKLIIAGASAYSREWDYARMRKIADEVGAYLMTDMAHISGLVAAGEANDPFPHSHVVTSTTHKSLRGPRSGLIFSRRNEGINDLVDFAVFPALQGGPHNHQIAALAAALKEAASPDFK-SYIKKVKTNAKALAAGLRARGHEVATDGTDNHLLLWDLRPRGLTGSKMEKLLEACSISANKNTLYGDKSAASPGGVRLGTPAMTTRGLDETDFRETVAGFLDRAACLACAVQERAGSKKLTAFVTEMDADEG-VRELKGEVEAFAERFYYP 530
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_005536271.1 (serine hydroxymethyltransferase [Cyanidioschyzon merolae strain 10D] >BAM79985.1 serine hydroxymethyltransferase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 576.2 bits (1484), Expect = 1.000e-160 Identity = 288/443 (65.01%), Postives = 345/443 (77.88%), Query Frame = 0 Query: 96 DAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKK-----------ELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 D EV +++ E++RQ G+ELIASENF S AV+EALGS TNKYSEG PG RYYGGN Y+D +ERLC+ RAL+ F+LS WGVNVQPYSGSPANFAVYTALL PHDRIMGLDLPSGGHLTHG+Y K+RVSATSIYFESLPYRV+ TG IDY+ L+K A LFRP+L++AGGSAY R+WDYAR R+IAD GAYL+ DMAHISGLV+ G +PFPY+DVVT+TTHKSLRGPR+GMIF+++ +L + I AVFP+LQGGPHNHQIAALAV L+E TP+FR Y Q++RNA+ALA L G+ +VT GTENHL+LWD+RP GITGSK+EKL E ++I++NKN + GD SA PGGVR+GTPA+TTRG E DF KVA FLD +R+AL+IQ S KKL DF M+ EV ALRE VE FA+ +P P Sbjct: 83 DPEVYQILEKEKERQRRGLELIASENFTSAAVMEALGSAFTNKYSEGYPGRRYYGGNMYIDEVERLCQERALAAFSLSPTDWGVNVQPYSGSPANFAVYTALLNPHDRIMGLDLPSGGHLTHGFYTAKKRVSATSIYFESLPYRVNETTGYIDYDALEKQAALFRPKLLIAGGSAYAREWDYARFRQIADQSGAYLLVDMAHISGLVATGEAQSPFPYADVVTTTTHKSLRGPRAGMIFYRRSALAEIAPRGADLEQRIQEAVFPALQGGPHNHQIAALAVQLREVQTPAFR-AYAKQIRRNAQALARRLVQHGYDLVTGGTENHLVLWDLRPIGITGSKMEKLCEYVSITLNKNAVPGDTSALNPGGVRIGTPALTTRGFREADFEKVADFLDSCVRIALRIQE-QSGKKLNDF-VAMLPDDPEVQALRESVERFASTFPMP 522
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_005789291.1 (serine hydroxymethyltransferase [Emiliania huxleyi CCMP1516] >XP_023280119.1 serine hydroxymethyltransferase 4-like [Seriola lalandi dorsalis] >EOD36862.1 serine hydroxymethyltransferase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 575.1 bits (1481), Expect = 2.200e-160 Identity = 282/446 (63.23%), Postives = 347/446 (77.80%), Query Frame = 0 Query: 96 DAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKK------------ELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTM--VAHAGEVVALRERVEAFATQYPFP 528 D EV + E+KRQ++GIELIASENF SKAV+E LGS MTNKYSEG PGARYYGGN+ +D +E LC +RAL+ FN WGVNVQPYSGSPANFAVYTALL PHDR+MGLDLPSGGHLTHGYY K+++SATSIYFESLPY VD TGLIDY+ L+K A++FRP++I+AG SAYPRDWDYAR+R+I D GA+L+ DMAHISGLV+ G +PF Y+DVVT+TTHKSLRGPR+GMIFF++ E +AI+FAVFP+LQGGPHNHQIAALA LKE +TP F+ Y QV+ NA+ALA L + G+ + TNGTENHL+L D+RP G+TG+K+EK+LE + I++NKN +HGD SA APGG+R+GTPAMTTRGL E DFVKV FL G++ AL++Q +S KKL DF K + A+A ++ + VEAFA +P P Sbjct: 13 DPEVYRFLLEEKKRQVNGIELIASENFTSKAVMECLGSCMTNKYSEGMPGARYYGGNQIIDQVENLCRSRALAAFNCDPAKWGVNVQPYSGSPANFAVYTALLTPHDRVMGLDLPSGGHLTHGYYTAKKKISATSIYFESLPYHVDSQTGLIDYDHLEKTAMVFRPKMIIAGASAYPRDWDYARMRDICDKTGAFLLVDMAHISGLVATGEQKSPFDYADVVTTTTHKSLRGPRAGMIFFRRGPKSDAENAPHYEYEDAINFAVFPALQGGPHNHQIAALATQLKEVATPEFKL-YAKQVRANAKALADYLVAQGYKLATNGTENHLMLLDLRPLGLTGNKMEKVLEHMHITLNKNAVHGDVSAMAPGGIRIGTPAMTTRGLKEADFVKVGEFLHRGIQFALEVQK-ASGKKLADFLKAIDEKANADKLAGMCSEVEAFAGAFPMP 456
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_005706998.1 (glycine/serine hydroxymethyltransferase [Galdieria sulphuraria] >EME30478.1 glycine/serine hydroxymethyltransferase [Galdieria sulphuraria]) HSP 1 Score: 567.0 bits (1460), Expect = 6.100e-158 Identity = 282/445 (63.37%), Postives = 345/445 (77.53%), Query Frame = 0 Query: 94 QEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKK----------ELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTM-VAHAGEVVALRERVEAFATQYPFP 528 Q D V L++ E++RQ G+ELIASENF SKAVLEALGS TNKYSEG+PGARYYGGN+Y+D LE LC+ RAL F+L+ WGVNVQPYSGSPANFAV TALLQPHDRIMGLDLPSGGHLTHG+Y K+RVSA+SIYFESLPYRV PVTG IDYE L++LA LFRP+LI+AGGSAYPR+WDYA+ R+I D AYLM DMAHISGLV+A +PFPY+DVVT+TTHKSLRGPR+GMIF+++ +L I+ AVFP+LQGGPHNHQIAALAV L + +TP FR EY QV NA+ALA L SLG+ + T+GTENHL+LWD+R +TGSK EKL E +I++NKN++HGD SA +PGGVR+GTPA+T+RG E DF +V FL G+ + L IQ + KKL DF + V + E++ L+ +VE+FA+ +P P Sbjct: 18 QADPLVYELLEKEKRRQWKGLELIASENFTSKAVLEALGSAFTNKYSEGQPGARYYGGNQYIDELEILCQQRALEAFSLNPNDWGVNVQPYSGSPANFAVLTALLQPHDRIMGLDLPSGGHLTHGFYTAKKRVSASSIYFESLPYRVSPVTGYIDYENLEELARLFRPKLIIAGGSAYPREWDYAKFRKICDENDAYLMVDMAHISGLVAAKQVLSPFPYADVVTTTTHKSLRGPRAGMIFYRRQCLAYSRRGEDLEPLINSAVFPALQGGPHNHQIAALAVQLAQVNTPEFR-EYAKQVILNAQALAEKLNSLGYHLATSGTENHLILWDLRAQSLTGSKAEKLFEKCSITLNKNSVHGDSSALSPGGVRIGTPALTSRGFKEKDFEQVGEFLHRGIEIGLNIQR-KTGKKLQDFLSGLEVYYQPELIGLQNQVESFASSFPIP 460
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_004349634.1 (serine hydroxymethyltransferase [Acanthamoeba castellanii str. Neff] >ELR22546.1 serine hydroxymethyltransferase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 565.1 bits (1455), Expect = 2.300e-157 Identity = 282/445 (63.37%), Postives = 348/445 (78.20%), Query Frame = 0 Query: 93 AQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEA----------IHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 A D EV LI+ E+KRQ++GIELIASENF S+AVLEALGS MTNKYSEG PG RYYGGN+ +D +E LC RAL F+LS E WGVNVQPYSGSPANFA YTALL PHDRIMGLDLPSGGHLTHGY +KR++SATSIYFES+PY+V TGLIDY+ L++ A LFRP++I+AG SAYPRDWDY RLR+IA+ GAYL+ DMAHISG+V+A CN+PF Y DVVT+TTHK+LRGPR+G+IFF++ EA I+ AVFP+LQGGPH + IAA+AVALKEA+ P F+ YI QVK+NA+ LA L S G+ +VT GT+NHL+LWDVRP +TGSK+EKL E ++ISVNKN ++GD SA +PGGVR+G PAMT+RGLTE DFV+VA L +G ++A+ IQ + + KL+ + + EV AL+E VEAFA+ +P P Sbjct: 12 ADADPEVQGLIRLEKKRQLNGIELIASENFTSRAVLEALGSCMTNKYSEGLPGRRYYGGNEVIDQVENLCIKRALEAFHLSPEQWGVNVQPYSGSPANFAAYTALLNPHDRIMGLDLPSGGHLTHGYQTDKRKISATSIYFESMPYQVSYQTGLIDYDRLEENAALFRPKMIIAGASAYPRDWDYKRLRQIANKHGAYLLCDMAHISGIVAAQECNSPFEYCDVVTTTTHKTLRGPRAGLIFFRRGKNEATGAAYDYEDRINNAVFPALQGGPHENTIAAVAVALKEAAEPEFK-TYIQQVKKNAKVLAETLVSKGYSVVTGGTDNHLVLWDVRPQEMTGSKLEKLFELVSISVNKNAVYGDASALSPGGVRLGAPAMTSRGLTEADFVRVAELLHKGAQIAIAIQ--NKTGKLLKNYLPALETSEEVKALKEEVEAFASTFPMP 453
BLAST of NO01G03110 vs. NCBI_GenBank
Match: XP_002676232.1 (hydroxymethyltransferase [Naegleria gruberi] >EFC43488.1 hydroxymethyltransferase [Naegleria gruberi]) HSP 1 Score: 563.1 bits (1450), Expect = 8.800e-157 Identity = 277/435 (63.68%), Postives = 340/435 (78.16%), Query Frame = 0 Query: 93 AQEDAEVAALIQAERKRQISGIELIASENFASKAVLEALGSIMTNKYSEGRPGARYYGGNKYVDALERLCEARALSLFNLSSESWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYNEKRRVSATSIYFESLPYRVDPVTGLIDYEELQKLALLFRPRLIVAGGSAYPRDWDYARLREIADACGAYLMTDMAHISGLVSAGACNNPFPYSDVVTSTTHKSLRGPRSGMIFFKKELAEAIHFAVFPSLQGGPHNHQIAALAVALKEASTPSFRQEYIWQVKRNAEALAMGLQSLGHVIVTNGTENHLLLWDVRPHGITGSKVEKLLEAIAISVNKNTIHGDKSASAPGGVRVGTPAMTTRGLTEGDFVKVAAFLDEGLRLALKIQAGSSSKKLVDFEKTMVAHAGEVVALRERVEAFATQYPFP 528 +Q D E+ LI+ E++RQ G+ELIASENF S+AV++ LGS +TNKYSEG+ GARYYGGN+Y+D +E+LC+ RAL F+L+SE W VNVQPYSGSPANFAVYT LLQPHDRIMGLDLPSGGHLTHGYY+ K+++SATSIYFESLPY VD GLIDY+ L+K A +FRP+LI+ GGSAYPRDWDYARLR+IAD AYLM DMAH SGLV+ G N+PF Y DVVTSTTHKSLRGPR+G+IF KK L I FAVFP +QGGPHNHQIAA+A LKE TP F+Q YI QVK NA+ LA L G+ + T GT+NHL+LW++RP GITGSK+EKL +A++I+ NKN+I GD +A +P GVR+GTPA+TTRG E DF KVA FL G+++ LK+Q + S KL DF + + E+ L+ VE+FA Q+ P Sbjct: 16 SQADPELFDLIEKEKERQWKGLELIASENFTSQAVMDCLGSCLTNKYSEGQVGARYYGGNEYIDEIEKLCKTRALEAFSLNSEDWSVNVQPYSGSPANFAVYTGLLQPHDRIMGLDLPSGGHLTHGYYSGKKKISATSIYFESLPYTVDQ-QGLIDYDGLEKSARVFRPKLIICGGSAYPRDWDYARLRKIADEIEAYLMCDMAHYSGLVATGEHNSPFQYCDVVTSTTHKSLRGPRAGIIFAKKALMPKIDFAVFPGIQGGPHNHQIAAIATQLKEVKTPEFKQ-YIQQVKANAKTLAKALIEKGYTLATGGTDNHLVLWNLRPQGITGSKMEKLFDAVSITSNKNSIAGDANALSPFGVRLGTPALTTRGFKEVDFEKVAEFLHRGVQIGLKLQEQAVSTKLADF-LALFENNEELTQLKSEVESFAKQFGIP 447 The following BLAST results are available for this feature:
BLAST of NO01G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03110 ID=NO01G03110|Name=NO01G03110|organism=Nannochloropsis oceanica|type=gene|length=2266bpback to top protein sequence of NO01G03110.1 >NO01G03110.1-protein ID=NO01G03110.1-protein|Name=NO01G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=529bpback to top Synonyms
Publications
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