NO01G03100, NO01G03100 (gene) Nannochloropsis oceanica

Overview
NameNO01G03100
Unique NameNO01G03100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2215
Alignment locationchr1:817503..819717 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-glycerate 3-kinase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:817503..819717 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
BLAST of NO01G03100 vs. NCBI_GenBank
Match: EWM29242.1 (d-glycerate 3-kinase [Nannochloropsis gaditana])

HSP 1 Score: 432.2 bits (1110), Expect = 1.700e-117
Identity = 220/391 (56.27%), Postives = 271/391 (69.31%), Query Frame = 0
Query:    1 MRAGSNSISSRGSSNGGGWRERDRVLSYARQSPIYPKCLPATTATDPSPLPPSSQEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISAREGENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKPVLRVVIDCDRKPKG 392
            M AGS   +S G    G W+ERD VL++ARQSPIY KC    +  +P+ L PS+QEWVDKG+F++ +LSV  +TP+ S+ GIRIFH YLPLYFWLR LV   RCR     P                            Q   +VVG+NAPQGAGKTTLVN CRALF LDGL CV LSIDDFYLTN +Q+ +AA+H GN LL++RGNAGTHDVALGR+TI++C+ A EGE + +P YDKSL  G GDRA R++WPVVEG +DV+LLEGWMLGFRP P D  +  + E GL  VN  LG Y++WH LVDAW ++QVEDL +I  WRLEAER MR ++G EG MTD +V DFVSRF+P+Y A+ +HS+Y  D L  +KPVLR+  D +R P G
Sbjct:   20 MYAGSCGFASGGR---GDWQERDDVLAFARQSPIYDKCF---SEQNPANL-PSAQEWVDKGLFLRDKLSVGQATPINSNFGIRIFHFYLPLYFWLRYLV---RCRRGQDLP----------------TGTQNNSEPLCSQPRTIVVGLNAPQGAGKTTLVNLCRALFSLDGLSCVALSIDDFYLTNDDQQRLAAQHSGNRLLEHRGNAGTHDVALGRDTIIQCVQAGEGEKVALPRYDKSLGAGRGDRAHRQQWPVVEGRIDVVLLEGWMLGFRPLPPDAPQ-LQKEAGLAQVNANLGEYEQWHALVDAWAVIQVEDLSIIASWRLEAERGMRRERGAEGGMTDAQVRDFVSRFMPSYTAFSEHSIYNEDELSRKKPVLRIFFDKERNPTG 383          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: CEM11788.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 292.4 bits (747), Expect = 2.200e-75
Identity = 157/366 (42.90%), Postives = 213/366 (58.20%), Query Frame = 0
Query:   25 VLSYARQSPIYPKCLPAT-TATDPSPLPPSSQEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISAREGENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKPVLRVVIDCDRKP 390
            V SY  + P++    P   + TD  P      +W+D+G  +   L    S  + +    RIFH YLP+YFW+     R R                                        L+VG +APQG GKTTLV F + LF+ +GL C V+SIDDFYLT +EQ  +A  +  NPLL+YRGNAG+HD+ LGR+T+++  SA++G ++ VP YDKSL  G GDRAP+ +WP VEGPVDV+L EGWM GF P  SD +     +  L+ VN  L  Y++W EL+DAW+ +Q+ D + +Y WRLE E+ M+   GK G MTD++VGDFV RF+PAYRAYL H    ++   +++PVLRV ID  R P
Sbjct:   63 VRSYIEEGPLFHLVAPTVGSLTDELP------QWMDRGKLLSDDLGYEWSA-LSTAQAARIFHYYLPVYFWIHSFCKRKR-------EAGGLQMTAAPAAPAPSGGDVGTAGRPMKGEGALLVGFSAPQGCGKTTLVTFLKTLFEQEGLTCTVVSIDDFYLTGEEQEQLARAYPDNPLLRYRGNAGSHDLPLGRDTLMRLQSAKKGTSVAVPRYDKSLREGRGDRAPQGQWPTVEGPVDVVLCEGWMFGFPPL-SDDDPALDGDPNLQLVNRLLRGYEQWDELMDAWIAIQIGDPKWVYDWRLEQEQAMK-SSGKPG-MTDQQVGDFVDRFMPAYRAYLPH--VYSNGWKADRPVLRVQIDKSRSP 409          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: CBN78958.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 237.3 bits (604), Expect = 8.200e-59
Identity = 145/371 (39.08%), Postives = 190/371 (51.21%), Query Frame = 0
Query:   53 SSQEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEP------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISAREGEN-----------------------ITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSD-------GEEGGRSEEGLKDVNNYLGSYQEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLY----AADA 372
            + ++W      + + L + P T  ++    R+FHLYLP+YFWL  L+ +S                                                       +  P+VVGINAPQG GKTT+V+  + + +  G  CVV+SIDDFYLT  EQ A+AA+   NPLLQ RGNAGTHD+AL   TI       +G +                       + VP YDKS  GG GDRAP   W VV  P DV+LLEGWMLGF   P D        E  G + +GL  VN +L  YQ  H+ VDAW++++  + E++++WR EAER+MRE  G+ G M+DEEV DF SR++PAYRAYL   LY    AADA
Sbjct:   31 AQEDWRSAAADLAASLGIDPLTSTEAQ-HRRVFHLYLPVYFWLELLLRQSXXXXXXXXXXXXXXXXXXXXXXXVAAGVPTANTHPRSSGGDVSKRARARSNSGSNKEPPVVVGINAPQGCGKTTIVSEMQRMLENAGHHCVVMSIDDFYLTGTEQDALAARFPTNPLLQVRGNAGTHDLALALRTIRALTRRDDGTSDGDSRDLRPSPPSSAEDPAAQDCVRVPRYDKSARGGKGDRAPEGEWSVVSTPPDVLLLEGWMLGFEALPDDSPLLLSAAEADGGTSDGLGAVNTFLEDYQSLHDEVDAWLVLKTAEPEMVFEWRAEAERRMRE-AGRPG-MSDEEVRDFCSRYMPAYRAYLP-GLYGRCRAADA 397          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: PSC67851.1 (hypothetical protein C2E20_8522 [Micractinium conductrix])

HSP 1 Score: 236.9 bits (603), Expect = 1.100e-58
Identity = 142/368 (38.59%), Postives = 192/368 (52.17%), Query Frame = 0
Query:   25 VLSYARQSPIYPKCLPATTATDPSPLPPSSQEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISA-REGENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQE-WHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKPVLRVV-IDCDRKP 390
            ++ + R SP+ P C         + +   +  WV+ G  + + L +PP   + ++   R+F  YLP++FW    + + R                                       PLV+GI+APQG GKTTL     ALF   G     +SIDDFYLT + Q  VAA H GNPLL+ RGNAG+HD+ LG +T+     A   G  + +P Y+KS   G GDRA    WP V+ PVDV+L EGWMLGF   P D E     +  L  VN +L SY+E W   VD+W++V V   +  Y+WRL+AE+ MR   GK  +MTDE+V  FV RF+PAYRAYL+  LYA     +    L VV +D +R P
Sbjct:   61 LVDFIRASPLLPSC-----GISGAQVEADAGRWVELGGRVMANLGLPPLAQLAAEDKRRVFQYYLPVFFWCEHQLEQHRA-------------------------------AAGAGSTPLVLGISAPQGCGKTTLCEQLEALFAYTGSTAASISIDDFYLTREGQEEVAAAHPGNPLLEMRGNAGSHDMQLGADTLRALQGATAAGTTVPLPRYNKSAHQGLGDRADPATWPTVKAPVDVVLFEGWMLGFA--PVDDEAAAAVDPSLAPVNAFLRSYKEAWDSFVDSWLVVSVAQPDYSYRWRLQAEQAMR-ASGKP-AMTDEQVATFVDRFMPAYRAYLR-GLYAQGPTTARPGHLLVVRVDENRTP 387          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: XP_002953616.1 (hypothetical protein VOLCADRAFT_94435 [Volvox carteri f. nagariensis] >EFJ45240.1 hypothetical protein VOLCADRAFT_94435 [Volvox carteri f. nagariensis])

HSP 1 Score: 235.0 bits (598), Expect = 4.100e-58
Identity = 132/322 (40.99%), Postives = 176/322 (54.66%), Query Frame = 0
Query:   70 VPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISARE-GENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQ-EWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKPVLRVVIDCDRKP 390
            VP +   Q+   +RI+H YLP+Y+W+   + + R                                     +  LV+GI+APQG GKTTLV   + LF   G R   +SIDDFYLT+ +Q+ +AA+H GN LLQ RGNAGTHD+ LG ET+ +    R  G+   VP YDKS  GG GDRA    WPVV GP+DV+L EGWM GF P      E    E  L  VN  L SY+  W ELVD+W+++++ D + +YKWRL+AE +M  K G +  M+ E++ DFVSRF+PAY AYL                L + +D +R P
Sbjct:   36 VPFAVSHQTYDRLRIYHYYLPVYWWVSQQLEQHR---------------------------------KAGHQTALVLGISAPQGCGKTTLVEQLQQLFTWLGHRAASVSIDDFYLTHTDQKDLAARHPGNRLLQLRGNAGTHDLGLGSETLKRLRELRSAGDTAAVPRYDKSAFGGLGDRADPSTWPVVSGPLDVVLFEGWMSGFAPLEPSAAEA--VEPALAAVNEQLRSYRTTWDELVDSWLVIRIGDPQWVYKWRLQAEERM--KAGGKPGMSAEQIADFVSRFMPAYTAYLPGLYTRGPTTARHGRTLVIEVDQNRSP 320          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: GAQ90446.1 (D-glycerate 3-kinase [Klebsormidium nitens])

HSP 1 Score: 233.8 bits (595), Expect = 9.100e-58
Identity = 144/367 (39.24%), Postives = 200/367 (54.50%), Query Frame = 0
Query:   25 VLSYARQSPIYPKCLPATTATDPSPLPPSSQEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISARE-GENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQE-WHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKP--VLRVVIDCDR 388
            +++Y  Q P+  K        +   +      WVD G+ + + L   P+   ++    RIFH YLP +FW R  + + R R+   +                                PLV+GI+APQG GK+T+V    +LF+  G  C  +S+DDFYLT  +Q  +A  ++GN LLQ+RGNAG+HD+  GR++I   +   E G    VP YDKS   G GDRA    WP V+GP++VIL EGWMLGFRP P+  ++    ++ L  VN +L  Y E +  LV AWV++QV D   ++KWRL+AE  MR  KGK G MTDE++ DF +RF PAY+AYL   LY  D  P  KP   L++ ID  R
Sbjct:  108 LVAYICQGPLLSK-----VGANQRSVTEGLSSWVDLGVKVCTDLGFDPAALDEAQKS-RIFHYYLPTFFWCRAQLEQHRQRHEAPDGASPP---------------------------PLVIGISAPQGCGKSTIVEELTSLFEYVGSHCAGISLDDFYLTAVDQSRMAEFYEGNKLLQFRGNAGSHDMEFGRQSIETLLKLTERGSTAKVPRYDKSANQGRGDRADPATWPEVKGPLEVILFEGWMLGFRPVPT--QQVADVDQQLIPVNAFLEHYAETFDTLVGAWVVIQVADPRWVFKWRLQAEHAMR-AKGKTG-MTDEQIEDFCARFQPAYKAYLP-GLY-KDGPPGAKPEATLQIRIDESR 435          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: PNH03549.1 (D-glycerate 3-kinase, chloroplastic [Tetrabaena socialis])

HSP 1 Score: 231.1 bits (588), Expect = 5.900e-57
Identity = 139/345 (40.29%), Postives = 188/345 (54.49%), Query Frame = 0
Query:   47 PSPLPPSSQEWVDKGIFMKSQLSVPPS--TPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISARE-GENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSY-QEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKPVLRVVIDCDR 388
            P  +  ++ EW   G  +  QL        P+Q    +RI+H YLP+Y+W+   +   R +                                   +  LV+GI+APQG GKTT+V     LF   G     +SIDDFYLT+ +Q A+AA H  N LLQ RGNAGTHD+ALG  TI K     E G++ TVP Y+KS  GG GDRA    WPVV GP++V+  EGWM GF P     E     E  L  VN  L SY Q W +LVD+W++V++ D + ++KWRL+AE +M  K G +  M+DE++ DFVSRF+PAY AYL   LYAA    + +P   ++I+ D+
Sbjct:   96 PESVRANAAEWERLGRQLALQLDFDHDHLDPVQR---LRIYHYYLPVYWWVAQQLDSHRLQG---------------------------------NKTALVLGISAPQGCGKTTIVEQLELLFNWVGRPAASVSIDDFYLTHADQNALAAAHPDNRLLQMRGNAGTHDLALGTATISKLRQLTEPGQSATVPRYNKSAFGGRGDRADSATWPVVSGPLEVVFFEGWMSGFTPVAP--EAAAAVEPALVTVNEILTSYRQAWDDLVDSWLVVRIGDPQWVFKWRLQAEERM--KAGGKPGMSDEQIADFVSRFIPAYSAYLP-GLYAAGP-TTARPSRTLIIEVDQ 398          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: XP_005709312.1 (glycerate kinase [Galdieria sulphuraria] >EME32792.1 glycerate kinase [Galdieria sulphuraria])

HSP 1 Score: 230.3 bits (586), Expect = 1.000e-56
Identity = 127/335 (37.91%), Postives = 186/335 (55.52%), Query Frame = 0
Query:   55 QEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCISAREGENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEKPVLRVVIDCDRKP 390
            +EW      +  +L + P+ P   +  +RI  LYLP++FWL+ +  + +                                       P +VGI+ PQG GKTTL    + LF+    +C V SIDDFY+T KEQ+ +  + + NPLL++RGN GTHDV LG + + +  S +  E + +P YDK+   G GDR P + W  VE PVD+ILLEGW LGF+P      E    +  L  +NN LG+YQ+W++++D W+++++EDL  IY WR +AE  +R +    G+MT E+V DFVSRF+PAY+ YL    Y +  L SE+  L+  ID  R+P
Sbjct:   38 KEWGRLANLLIQKLKLDPTLP---ETNVRIHQLYLPIFFWLKKVCDQQK------------------------------------SGAP-IVGISCPQGGGKTTLTFAVQFLFQQLQRKCAVASIDDFYITRKEQQMLFERER-NPLLEFRGNPGTHDVELGVQVLSQLKSCKANERVAIPRYDKAAWNGLGDRFPIDEWYAVECPVDLILLEGWCLGFQP----VREEELIDSRLGSINNRLGAYQKWYDMLDGWLVIEIEDLNWIYDWRAQAEDMLRMQ--NRGAMTPEQVRDFVSRFMPAYQQYL-FRFYRSPLLTSEQNRLQFRIDKKRQP 324          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: XP_002500252.1 (glycerate kinase [Micromonas commoda] >ACO61510.1 glycerate kinase [Micromonas commoda])

HSP 1 Score: 229.2 bits (583), Expect = 2.200e-56
Identity = 142/340 (41.76%), Postives = 185/340 (54.41%), Query Frame = 0
Query:   57 WVDKGIFMKSQLSVPPST--PMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRC-PLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETI--LKCISAREGENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRS-EEGLKDVNNYL--GSYQEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSEK-PVLRVVIDCDR 388
            W      +  QLS+  ++  P Q+    R++  Y+P+Y W    +   R  + P                                 C PLVVG++APQG GKTTLV     L   DG+R   +SIDD YLT  EQ  +A K+  NPLL++RGNAG+HDVALG  TI  LK ++A  G    VP YDK++ GG GDRAPR+ WP    P+ ++LLEGWMLGF P    G+E  ++ +  L  VN  L  G Y   H  VD WV+V+VE +E + +WRLEAER+ R      G++TD+EV DFV RFLPAYRAYL   LY      S+   VL V +D  R
Sbjct:   45 WTSVAARLCDQLSLEQASLDPAQAS---RVYRYYMPVYLWCLARLEAHRSASAP------------------------------GAACPPLVVGLSAPQGCGKTTLVAQLTRLLDADGVRAASVSIDDVYLTGAEQETLANKNPHNPLLRFRGNAGSHDVALGVRTIESLKALNANPGSTTKVPRYDKTMRGGRGDRAPRDIWPTHTAPLHLVLLEGWMLGFSP---VGDEAVKAFDPHLAAVNRELRRGGYDRLHLAVDDWVVVRVEHIEWVREWRLEAEREAR--AAGRGALTDDEVADFVDRFLPAYRAYLP-GLYGDGPFGSQTGKVLTVRVDRGR 345          
BLAST of NO01G03100 vs. NCBI_GenBank
Match: XP_006343101.2 (PREDICTED: D-glycerate 3-kinase, chloroplastic [Solanum tuberosum] >XP_015162273.1 PREDICTED: D-glycerate 3-kinase, chloroplastic [Solanum tuberosum])

HSP 1 Score: 228.4 bits (581), Expect = 3.800e-56
Identity = 135/345 (39.13%), Postives = 192/345 (55.65%), Query Frame = 0
Query:   53 SSQEWVDKG-----IFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVLRSRCRNRPFEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRCPLVVGINAPQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNPLLQYRGNAGTHDVALGRETILKCIS-AREGENITVPFYDKSLCGGWGDRAPRERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSYQE-WHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDFVSRFLPAYRAYLQHSLYAADALPSE-KPVLRVVIDCDRKP 390
            S  +W++ G     +F  +QL++  +        IRI+H Y+P++ W    + +   + +  E                                PLV+G +APQG GKTTLV     LFK+ G R   +SIDDFYLT +EQ  +   + GN LL++RGNAG+HD+ L  ET+       +EG  + +P YDKS   G GDRA    WP VEGP+ VIL EGWMLGF+P P +  +    +  L+ VN  L +Y + WH+ V +W++++++D   +Y+WRL+AE  MR   GK G MTDEEV DFVSR+LPAY+AYL  +LY+     S+ + VL + ID  R P
Sbjct:  149 SIDKWIEYGLRLCRLFQLNQLALNEAQK------IRIYHYYIPVFLWCEQEISQHSSKFKEEEEIP-----------------------------PLVIGFSAPQGCGKTTLVFALEYLFKITGRRAATISIDDFYLTAEEQAKLRDSNPGNLLLEFRGNAGSHDLPLSVETLTALSKLTKEGVKMKLPRYDKSAYSGRGDRADPSEWPEVEGPLPVILFEGWMLGFKPLPPEVVKA--VDPQLETVNKNLETYYDAWHKFVKSWIVIKIQDPSYVYQWRLQAEIAMR-ADGKAG-MTDEEVKDFVSRYLPAYKAYLP-TLYSEGPSGSDPEHVLLIDIDEGRNP 453          
The following BLAST results are available for this feature:
BLAST of NO01G03100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29242.11.700e-11756.27d-glycerate 3-kinase [Nannochloropsis gaditana][more]
CEM11788.12.200e-7542.90unnamed protein product [Vitrella brassicaformis C... [more]
CBN78958.18.200e-5939.08conserved unknown protein [Ectocarpus siliculosus][more]
PSC67851.11.100e-5838.59hypothetical protein C2E20_8522 [Micractinium cond... [more]
XP_002953616.14.100e-5840.99hypothetical protein VOLCADRAFT_94435 [Volvox cart... [more]
GAQ90446.19.100e-5839.24D-glycerate 3-kinase [Klebsormidium nitens][more]
PNH03549.15.900e-5740.29D-glycerate 3-kinase, chloroplastic [Tetrabaena so... [more]
XP_005709312.11.000e-5637.91glycerate kinase [Galdieria sulphuraria] >EME32792... [more]
XP_002500252.12.200e-5641.76glycerate kinase [Micromonas commoda] >ACO61510.1 ... [more]
XP_006343101.23.800e-5639.13PREDICTED: D-glycerate 3-kinase, chloroplastic [So... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008014NSK008014Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03100.1NO01G03100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550977gene_311Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100119g11gene1385Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03100.1NO01G03100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03100 ID=NO01G03100|Name=NO01G03100|organism=Nannochloropsis oceanica|type=gene|length=2215bp
ACTTGCTTCAAGTCAGGCGGCAACGTCTACATCTCGCCTCAAACCCACAT
CCAACAGATAAATAATCCCCAAGTCACGCTTCGTCAAGGAAAAAGTGGCA
ACGTTGCCCTGCACCGTAGTTTGAGGGTGGCCAGAATAGCCGGGGCGTTG
GTTAGCGTCGTGGCCGGAGAGCCACCAAGCTCGCTTCCCCCCTCCTCCCC
CTCTCTCACTGCAATCTCTCAGTCCTCATCCCACGCTATCTCTACCAGGC
CACACTGCCCAATGCGGCGCTTGCGGATGCCGTGTATTCAATAGTTGGTG
TCATTCCCAGTGGCACATTCCTGACGATTTTGGTTGTAAACGAGATCAGG
AGCAGGAGCTGCAAAAACACTCCCCCGTGCTTGTGGGAGTCGCAAGCAAG
TATAGAAGGCTGCACATGCACAAGAGCAGCACCATTCTACAAAGTTACAC
TTCTGTGAAAATTGTATTCCTATCCTCCGCCCACATCCCACCGCACACAG
AGTTCAGGAGCAGCAGAAGCAGCAGAAGGCATACACCAGGACAAGGGACT
AAGGAAAGGTGGCATTTACCGGCTTTGTGATTGCCTGGAGGGTGGTCGGT
CTGAGGAGACTCCGTCTCATGCGGGCAGGATCTAACAGCATTAGCAGTCG
GGGTAGTAGCAATGGCGGGGGTTGGCGAGAGAGAGATCGAGTGCTGTCTT
ATGCACgtaagtacctacctcctacctccctctccctatgtggattcgtg
tgtacgaatggtgtcagtgatggccaatcgctcaattaatcatgactcct
tcgcttctgcgtcttttttactgagttccttcttccattcctccttcctc
taacaatttggccctctggttctacagGCCAAAGCCCCATCTATCCCAAG
TGCTTGCCAGCAACGACAGCAACAGACCCGAGCCCTCTTCCTCCCTCCAG
CCAAGAATGGGTGGATAAGGGCATCTTCATGAAAAGCCAGCTCTCCGTTC
CACCATCCACGCCAATGCAGTCTGACGTGGGCATCCGGATTTTTCATTTA
TATTTGCCGgtatgtatacatatgagtgtgtgtgtgtgtcagtgtgtcag
tgtgtgtattgttgtgtgacaaacaaacaaacaaacaaacaaacgtgtgt
cagtgtgtgtattgttgttggaaaggaaagggtttcttttgattccatct
cacttctccaacccatttttcatctctctctcctcctttggtccccagCT
TTACTTTTGGCTACGCGGCCTCGTGCTGCGGAGTCGATGCCGAAATAGGC
CGTTTGAGCCGCCATCACCACTCCAGCAGCAGCAACAGCAGCAGCAGCAG
CAGCGACAACAACGACAACAAGGATTGCAACCACAACACCAGCAGCAGCG
CTGTCCTCTCGTCGTGGGTATCAATGCTCCCCAAGGCGCTGGCAAGACGA
CCCTAGTCAATTTCTGCCGAGCTCTCTTCAAGCTAGACGGGCTGAGGTGC
GTCGTTCTTTCCATTGATGATTTTTATTTAACCAACAAAGAGCAACGAGC
CGTAGCGGCAAAGCACAAAGGTAATCCTCTCTTACAATACCGGGGGAATG
CTGGGACGCATGATGTCGCCCTAGGCCGAGAAACCATCTTGAAATGCATT
TCCGCTAGGGAAGGAGAGAATATAACAGTTCCTTTTTATGATAAGTCTTT
GTGTGGAGGATGGGGGGATCGAGCACCACGGGAGAGATGGCCAGTGGTGG
AGGGCCCTGTGGACGTTATTTTGCTGGAAGGGTGGATGCTTGGATTTAGG
CCGTGGCCCTCTGATGGGGAGGAAGGGGGAAGGAGTGAGGAGGGATTGAA
GGACGTGAATAATTACTTGGGCAGCTATCAGGAATGGCACGAGCTGGTCG
ATGCTTGGGTGATAGTGCAGGTGGAGGACTTAGAGGTAATATACAAGTGG
CGGTTGGAGGCGGAACGGAAAATGAGAGAGAAAAAGGGGAAGGAGGGGAG
CATGACTGATGAGGAGGTGGGGGATTTTGTGTCGAGATTCTTGCCGGCCT
ACAGGGCGTATTTGCAGCATTCTTTGTATGCTGCTGATGCGTTGCCGTCG
GAGAAGCCGGTGTTGCGGGTGGTGATCGATTGTGACAGGAAGCCCAAGGG
GTAAGACGAGGAAAGAGGGTAGATACGGAAGAAGACAACAGCTGTAATTT
GCATCGAGTTTAAGG
back to top

protein sequence of NO01G03100.1

>NO01G03100.1-protein ID=NO01G03100.1-protein|Name=NO01G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MRAGSNSISSRGSSNGGGWRERDRVLSYARQSPIYPKCLPATTATDPSPL
PPSSQEWVDKGIFMKSQLSVPPSTPMQSDVGIRIFHLYLPLYFWLRGLVL
RSRCRNRPFEPPSPLQQQQQQQQQQRQQRQQGLQPQHQQQRCPLVVGINA
PQGAGKTTLVNFCRALFKLDGLRCVVLSIDDFYLTNKEQRAVAAKHKGNP
LLQYRGNAGTHDVALGRETILKCISAREGENITVPFYDKSLCGGWGDRAP
RERWPVVEGPVDVILLEGWMLGFRPWPSDGEEGGRSEEGLKDVNNYLGSY
QEWHELVDAWVIVQVEDLEVIYKWRLEAERKMREKKGKEGSMTDEEVGDF
VSRFLPAYRAYLQHSLYAADALPSEKPVLRVVIDCDRKPKG*
back to top
Synonyms
Publications