NO01G03050, NO01G03050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03050 vs. NCBI_GenBank
Match: EWM29249.1 (photosystem ii oxygen evolving complex protein [Nannochloropsis gaditana]) HSP 1 Score: 332.4 bits (851), Expect = 1.200e-87 Identity = 176/245 (71.84%), Postives = 201/245 (82.04%), Query Frame = 0 Query: 1 MRSSVIAVACLVAACGRTQAFVLPSKSSSTISSARPQSRALSSSTALAALST-----SMHDRRGLLFKTTGSLLGLAGLALVRPANAYDEVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFKGEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 M + VAC + A G T AFV PS+SS + + + ++ +A +T S DRR LLFK+ GSLLGL GL+L RPA A +EVPLVRDK GGLLEPYTDIAKGLK+SRPSGWNQF+G+PETYVVKWSDIINRDE+VVLNSTPVKASTT+V+ALGDVQ++GKKLA GRGAELVEAKARLTEGVLFYEFEFKGEA+SE+A LCVAKGRLWNLSAT+ATKRW K+RDL KGVIGSFLPKL Sbjct: 1 MLRGLFTVACSLTALG-TAAFVPPSRSSFIFPTRQQLQQQQTTGRVMALYATNTPSLSTLDRRALLFKSAGSLLGLVGLSLARPAEAVEEVPLVRDKQGGLLEPYTDIAKGLKLSRPSGWNQFEGTPETYVVKWSDIINRDEVVVLNSTPVKASTTAVDALGDVQDVGKKLAAGRGAELVEAKARLTEGVLFYEFEFKGEAVSEVACLCVAKGRLWNLSATSATKRWPKRRDLLKGVIGSFLPKL 244
BLAST of NO01G03050 vs. NCBI_GenBank
Match: XP_002182797.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45533.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 172.2 bits (435), Expect = 2.000e-39 Identity = 87/205 (42.44%), Postives = 131/205 (63.90%), Query Frame = 0 Query: 40 ALSSSTALAALSTSMHDRRGLLFKTTGSLLGLAGLALVRPANAY--DEVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALG-DVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFK-GEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 A+ + +AA S+ + R+ T+ +++G++ P AY DE P V ++GGLLE + D +G ++ PSGWN+F+G Y VKW D+++ E V ++STPVK++T SV ALG DVQ +G KLA+ R A+L+ A RLTEG+LFY F+F + +L LCV KGRLW+L A + KRW K+ +++ V+ SF+P+L Sbjct: 13 AMGAEQQVAAWSSPLSRRQAFQAATSAAVIGVSSTIAGHPVQAYPSDETPRVATRMGGLLEAFQDGPRGFRIMIPSGWNKFEGEVGAYDVKWQDLVDPSENVKISSTPVKSTTESVAALGDDVQALGLKLAEKRNAKLISASERLTEGILFYNFDFAIKDGTHQLLQLCVGKGRLWSLDANSKEKRWDKREEMYSNVLASFIPRL 217
BLAST of NO01G03050 vs. NCBI_GenBank
Match: OEU20888.1 (Mog1p/PsbP-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 160.2 bits (404), Expect = 7.900e-36 Identity = 73/158 (46.20%), Postives = 109/158 (68.99%), Query Frame = 0 Query: 84 DEVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFK-GEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 +E P ++GGLLE + D + +++ PSGWN+FDG Y +KW D++++ E + ++STPVK+STTS+E LG+VQ +G LA R A+LV+A RLT+ VLFY FEF + +L LCV KG+LW++ A++ KRW+K+ +L+ V SF+PKL Sbjct: 95 EETPRSVTRMGGLLESFQDGNRSIRMMVPSGWNKFDGEVGAYDIKWQDLVDKSENIKISSTPVKSSTTSIEVLGEVQGVGVNLASKRNAKLVKATERLTDDVLFYRFEFAINDGTHQLLQLCVCKGKLWSIDASSTEKRWSKRAELYDNVFTSFMPKL 252
BLAST of NO01G03050 vs. NCBI_GenBank
Match: XP_005820643.1 (hypothetical protein GUITHDRAFT_155962 [Guillardia theta CCMP2712] >EKX33663.1 hypothetical protein GUITHDRAFT_155962 [Guillardia theta CCMP2712]) HSP 1 Score: 156.0 bits (393), Expect = 1.500e-34 Identity = 75/153 (49.02%), Postives = 101/153 (66.01%), Query Frame = 0 Query: 92 KLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFKG----EAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 K+GGLL P+ D+ KG ++ RPSGWNQFD +P Y VKW D++ + ELV++ S+PVK S T V LG V ++G LA + AELVEAK G+ FY F FK E+ LCV KG+LW+++AT A KRW K++DL+ + SF+PKL Sbjct: 64 KMGGLLSPFKDVNKGFQIFRPSGWNQFDSAPGEYDVKWEDLVEKSELVMVGSSPVK-SATDVNVLGPVDKVGASLASKKKAELVEAKETERSGIRFYTFVFKAGDDKTGAREVYQLCVNKGKLWSVTATTAEKRWNKRKDLYSTIFSSFVPKL 215
BLAST of NO01G03050 vs. NCBI_GenBank
Match: GAX18416.1 (photosystem II oxygen-evolving enhancer protein 2 [Fistulifera solaris]) HSP 1 Score: 152.5 bits (384), Expect = 1.600e-33 Identity = 85/195 (43.59%), Postives = 118/195 (60.51%), Query Frame = 0 Query: 49 ALSTSMHDRRGLLFKTTGSLLGLAGLALVRPANAYDEVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRG-AELVEAKARLTEGVLFYEFEFK-GEAISELASLCVAKGRLWNLSATAATK-RWAKKRDLFKGVIGSFLPKL 241 A +T R L TT + + A P +E P V ++GGLLEPY D +G ++ PSGWN+FDG Y VKW D+++ E + L+STPVK+S SV ALG V+E+G KLA R A LV+A R+T+G+LFY FEF + +L L + K +LW+L A A + RW K+ +L+ V+GSF+PKL Sbjct: 16 AWTTPASRREALQHMTTAVIATSSSAAFALPT---EETPRVVTRMGGLLEPYQDGPRGFRLLAPSGWNKFDGEVGAYDVKWQDLVDPLEQIKLSSTPVKSSIESVAALGTVEELGPKLAAKRNQATLVQASERITDGILFYTFEFALPDQTHQLLLLTIHKSKLWSLDANARNEGRWKKRSELYANVVGSFMPKL 207
BLAST of NO01G03050 vs. NCBI_GenBank
Match: GAX24450.1 (photosystem II oxygen-evolving enhancer protein 2 [Fistulifera solaris]) HSP 1 Score: 149.4 bits (376), Expect = 1.400e-32 Identity = 86/196 (43.88%), Postives = 119/196 (60.71%), Query Frame = 0 Query: 48 AALSTSMHDRRGLLFKTTGSLLGLAGLALVRPANAYDEVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRG-AELVEAKARLTEGVLFYEFEFK-GEAISELASLCVAKGRLWNLSATAATK-RWAKKRDLFKGVIGSFLPKL 241 AA ST+ R L T + A A P +E P V ++GGLLEPY D +G ++ PSGWN+FDG Y VKW D+++ E + L+STPVK+S SV ALG ++E+G KLA R A LV+A RLT+G+LFY FEF + ++ L + K +LW+L A A + RW K+ +L+ V+GSF+PKL Sbjct: 15 AAWSTTTR-REALHHMTAAVIATSAAPAFALPT---EETPRVVTRMGGLLEPYQDGPRGFRLLAPSGWNKFDGEVGAYDVKWQDLVDPLEQIKLSSTPVKSSIESVAALGTLEELGPKLAAKRNQATLVQASERLTDGILFYTFEFALPDQTHQMLLLTIHKSKLWSLDANARNEARWKKRSELYANVVGSFMPKL 206
BLAST of NO01G03050 vs. NCBI_GenBank
Match: EJK63943.1 (hypothetical protein THAOC_15373 [Thalassiosira oceanica]) HSP 1 Score: 149.1 bits (375), Expect = 1.800e-32 Identity = 69/150 (46.00%), Postives = 104/150 (69.33%), Query Frame = 0 Query: 92 KLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFK-GEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 ++GGLLE Y D ++G + PSGWN FDG Y KW D++++ + V ++STPVK++TTSV+ LG V+++GK LA R A+L+ A R T+G+LFY F+F + +L LCV KG++W++ A K +AKK+DL+ ++GSF+PKL Sbjct: 68 RMGGLLEKYQD-SRGWTILAPSGWNSFDGEVGAYDKKWQDLVSQTDNVKISSTPVKSTTTSVDILGPVEDVGKSLASKRSAKLIAALERQTDGILFYTFDFALDDGTHQLLQLCVNKGKIWSVDANTLEKSYAKKKDLYYNILGSFMPKL 216
BLAST of NO01G03050 vs. NCBI_GenBank
Match: KOO29798.1 (photosystem ii oxygen evolving complex protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 147.5 bits (371), Expect = 5.300e-32 Identity = 68/148 (45.95%), Postives = 100/148 (67.57%), Query Frame = 0 Query: 92 KLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFKGEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPK 240 K+GGLLEPY D KG K+ P GWN+F+ P Y VK+ D+I + V ++++PV A+ TSV ALGD+ +G K AK R AELV+A+ EG L Y FE KGE EL +LC+ +G+L+ ++ + K+W K+++L+K ++ SF+PK Sbjct: 57 KMGGLLEPYIDTQKGYKLYSPKGWNKFESDPGVYDVKFQDVIEPETTVQVSTSPV-ATATSVSALGDLPTVGAKFAKSRNAELVKAEESDVEGSLVYTFELKGELYHELLALCINRGKLYRVTTVTSNKKWPKRQELYKNIVASFVPK 203
BLAST of NO01G03050 vs. NCBI_GenBank
Match: CBN79490.1 (Photosystem II oxygen evolution complex protein PsbP [Ectocarpus siliculosus]) HSP 1 Score: 146.4 bits (368), Expect = 1.200e-31 Identity = 86/240 (35.83%), Postives = 131/240 (54.58%), Query Frame = 0 Query: 5 VIAVACLVAACGRTQAFVLPSKSSSTISSARPQSRALSSSTALAALSTSMHDRRGLLFKTTGSLLGLAGLALVRPANAYD----EVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFKGEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 ++ V A G + FV P ++ R S + + DR L + L LV A+ + +V LV KLGG LEP+ D++KG ++++P GWN++DG+ Y VK D+++ L++L ++PVK S T + LG ++G+KL+KGR ELV A+ R+TEG+ Y+FEFKG EL +L V K +LWNL+ K W K+ + FK ++ SFLP+L Sbjct: 1 MLRVVTFAAVVGCSNGFVAP-------NAVRAGSNPTLERHTVRMSAEGPSDRAQFLTTSAAVAASAVMLPLVAVADEGETGSKQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVK-SDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232
BLAST of NO01G03050 vs. NCBI_GenBank
Match: CEL96783.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 134.8 bits (338), Expect = 3.500e-28 Identity = 89/260 (34.23%), Postives = 137/260 (52.69%), Query Frame = 0 Query: 4 SVIAVACLVAACGRTQAFVLPSKSSSTI--SSARPQSRALSSSTALAALSTSMHDRRGLLFKTTGSLLGLAGLALVRPAN------------AYDEVPLVRDKLGGLLEPYTDIAKGLKVSRPSGWNQFD--GSPE-------TYVVKWSDIINRDELVVLNSTPVKASTTSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFKGEAISELASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL 241 + + + L AA RT VLPS + ++ SS P S + SS + S S + R L +L+ A++ + EVP +++GG L+PY DI +G K++RPSGWN+F G+ + YVVKW D++ + E + + S PV S +SVE+LGD E+G KLAK R L+ A AR T ++Y FE +GE + EL +L + +G+LW ++ + KRW K + F+ + SF P + Sbjct: 34 AAVTLLPLAAAFSRT---VLPSSARRSVLRSSLSPGSHSPPSSAWQLSSSPSAEESRRALIDRLAALVPAISAAVLTGGSVGSAWAAGEAIATIPEVPPSTNRMGGQLQPYNDIQRGFKLNRPSGWNEFQCVGTEDQVARCKNQYVVKWQDVVEKLEQITVASKPVSKS-SSVESLGDPAEVGAKLAKIRNCNLIGASARRTRDHVYYTFELQGETVHELVALSIFEGKLWQINCITSEKRWPKMQSTFQETLLSFQPAI 289 The following BLAST results are available for this feature:
BLAST of NO01G03050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03050 ID=NO01G03050|Name=NO01G03050|organism=Nannochloropsis oceanica|type=gene|length=1792bpback to top protein sequence of NO01G03050.1 >NO01G03050.1-protein ID=NO01G03050.1-protein|Name=NO01G03050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top Synonyms
Publications
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