NO01G03020, NO01G03020 (gene) Nannochloropsis oceanica

Overview
NameNO01G03020
Unique NameNO01G03020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1328
Alignment locationchr1:792286..793613 +

Link to JBrowse

Properties
Property NameValue
DescriptionElectron transfer flavoprotein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:792286..793613 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029035DHS-like_NAD/FAD-binding_dom
IPR014731ETF_asu_C
IPR014730ETF_a/b_N
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Homology
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: ETI54831.1 (hypothetical protein F443_02425 [Phytophthora parasitica P1569])

HSP 1 Score: 356.7 bits (914), Expect = 8.200e-95
Identity = 206/333 (61.86%), Postives = 254/333 (76.28%), Query Frame = 0 
Query:   14 RQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            RQ++R + A         STLVVAEH+ ++  +S +TL+T++AA    G IT+LV G Q   A A+ AA+V G++ VL A    Y+  +AE V++++VAAQ AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA VK+ +A+KL+TVR T F+KA A GG+A +  APE  AP AG ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    4 RQIIRRV-ATQTPRSAAMSTLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQAGPA-AEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNASVSPAPE--APTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 330
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: ETO83594.1 (hypothetical protein F444_02409 [Phytophthora parasitica P1976])

HSP 1 Score: 356.7 bits (914), Expect = 8.200e-95
Identity = 205/333 (61.56%), Postives = 254/333 (76.28%), Query Frame = 0 
Query:   14 RQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            RQ++R + A         STLVVAEH+ ++  +S +TL+T++AA    G IT+LV G Q   A A+ AA+V G++ VL A    Y+  +AE V++++VAAQ AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA +K+ +A+KL+TVR T F+KA A GG+A +  APE  AP AG ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    4 RQIIRRV-ATQTPRSAAMSTLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQAGPA-AEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDIVAVADKDTFFRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAAAEGGNASVSPAPE--APTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 330
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_008899656.1 (hypothetical protein PPTG_07242 [Phytophthora parasitica INRA-310] >ETK94691.1 hypothetical protein L915_02305 [Phytophthora parasitica] >ETL48088.1 hypothetical protein L916_02265 [Phytophthora parasitica] >ETM01179.1 hypothetical protein L917_02202 [Phytophthora parasitica] >ETN15023.1 hypothetical protein PPTG_07242 [Phytophthora parasitica INRA-310] >ETP24668.1 hypothetical protein F441_02376 [Phytophthora parasitica CJ01A1] >ETP52630.1 hypothetical protein F442_02393 [Phytophthora parasitica P10297])

HSP 1 Score: 356.3 bits (913), Expect = 1.100e-94
Identity = 205/333 (61.56%), Postives = 254/333 (76.28%), Query Frame = 0 
Query:   14 RQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            RQ++R + A         STLVVAEH+ ++  +S +TL+T++AA    G IT+LV G Q   A A+ AA+V G++ VL A    Y+  +AE V++++VAAQ AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA +K+ +A+KL+TVR T F+KA A GG+A +  APE  AP AG ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    4 RQIIRRV-ATQTPRSAAMSTLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQAGPA-AEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAAAEGGNASVSPAPE--APTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 330
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_009530443.1 (hypothetical protein PHYSODRAFT_354931 [Phytophthora sojae] >EGZ13014.1 hypothetical protein PHYSODRAFT_354931 [Phytophthora sojae])

HSP 1 Score: 355.5 bits (911), Expect = 1.800e-94
Identity = 206/333 (61.86%), Postives = 250/333 (75.08%), Query Frame = 0 
Query:   14 RQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            RQ++R + A         STLVVAEH+ A+  +S +TL+T+TAA    G IT+LV G Q   A A+ A +V G+  VL A    Y+  +AE V++++VAAQ A  YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA VK+ +A+KL+TVR T F+KA A GGSA +  APE  AP  G ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    4 RQIIRRV-ATQTPRSAAMSTLVVAEHNQAQ--ISGATLATVTAASQIGGDITLLVLGSQAGPA-AEAATKVAGVKNVLHAADPKYDHLVAEEVAELLVAAQKAENYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGSASVSPAPE--APTVGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVGDLFDAVPELTEKI 330
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: POM73979.1 (Electron transfer flavoprotein subunit alpha, mitochondrial precursor [Phytophthora palmivora var. palmivora])

HSP 1 Score: 355.5 bits (911), Expect = 1.800e-94
Identity = 205/333 (61.56%), Postives = 252/333 (75.68%), Query Frame = 0 
Query:   14 RQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            RQ++R + A+        STLVVAEH+ ++  +S +TL+T+TAA    G IT+LV G Q   A A+ AA+V G+  VL A    Y+  +AE V++++VA Q AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA VK+ +A+KL+TVR T F+KA A GGSA +  APE  AP  G ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELT+K+
Sbjct:    4 RQIIRRV-ASQTPRSSAMSTLVVAEHNQSQ--VSGATLATVTAASQIGGDITLLVLGSQAGQA-AEAAAKVAGVKNVLHAADPKYDHYVAEEVAELLVATQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGSASVSPAPE--APTVGHTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTDKI 330
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: WP_011468475.1 (electron transfer flavoprotein subunit alpha [Saccharophagus degradans] >ABD81257.1 electron transfer flavoprotein, alpha subunit [Saccharophagus degradans 2-40])

HSP 1 Score: 352.1 bits (902), Expect = 2.000e-93
Identity = 198/315 (62.86%), Postives = 245/315 (77.78%), Query Frame = 0 
Query:   32 STLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            + LV+AEH     TL  STL+ I AA      I+VLVAG    + VA  AA+V G+SKVL A++AAY+  LAENV+QV+V+   A GYSHILAP++   KN++PRVAA+LD Q ++DVI +  E TF RP+YAGN IATVK+ +A K+LTVRATAFD   + GGSA +EA  EV+  +AGLS+F  E +++S RPEL +ARVV+SGGRG++  ENF ML TLADKL  AVGASRAAVD   +PN++QVGQTGK+VAPDLY+AVGISGAIQHL+GMKDSKVIVAINKD++APIFQVADYGLVADLF  +PEL EK+
Sbjct:    2 AVLVIAEHD--NKTLHPSTLNVIAAASKVGDDISVLVAGASAAE-VADAAAKVDGVSKVLHADNAAYQYQLAENVAQVVVSLAKANGYSHILAPATTTGKNLLPRVAALLDVQQLSDVIAVESEDTFKRPIYAGNVIATVKSIDATKVLTVRATAFDPVASEGGSASIEAIAEVS--EAGLSSFEKEELAKSDRPELTAARVVISGGRGMQNGENFEMLYTLADKLDAAVGASRAAVDAGFVPNDMQVGQTGKIVAPDLYIAVGISGAIQHLAGMKDSKVIVAINKDEDAPIFQVADYGLVADLFDVIPELNEKL 311
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: WP_028466041.1 (electron transfer flavoprotein subunit alpha [Nisaea denitrificans])

HSP 1 Score: 347.4 bits (890), Expect = 5.000e-92
Identity = 194/315 (61.59%), Postives = 249/315 (79.05%), Query Frame = 0 
Query:   32 STLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            S LVVAEH  ++  ++ +TL+T+TAA    G ITVLVA G G  A A   A++ G+SKVL A+ A Y  GLAENV+ ++VA   A GYSH+LAP++   KN++PR AA+LD Q ++++  +VD  TFVRP+YAGNA+ATVK+S+A+K++TVR TAFD A + GGSA +EAA   A  D+GL+++V   +S S RPEL SA++V+SGGRG++  ENFAMLE +ADKL  AVGASRAAVD   +PN+ QVGQTGKVVAPDLY+AVGISGAIQHL+GMKDSKVIVAINKD+EAPIFQVADYGLVADLF+AVP L++++
Sbjct:    2 SVLVVAEHDNSE--IAPATLNTVTAAAEIGGDITVLVA-GSGSAAAAXXXAKIAGVSKVLHADSAEYANGLAENVAPLVVAL--ATGYSHVLAPATSFGKNVLPRAAALLDVQQISEISGVVDADTFVRPIYAGNAMATVKSSDAVKVITVRTTAFDAAASEGGSAAVEAAD--AKGDSGLTSYVGAELSSSERPELTSAKIVISGGRGMQNGENFAMLEEVADKLGAAVGASRAAVDAGFVPNDYQVGQTGKVVAPDLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFEAVPALSKEL 309
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: WP_076398676.1 (electron transfer flavoprotein subunit alpha [Insolitispirillum peregrinum] >SIS40454.1 electron transfer flavoprotein alpha subunit apoprotein [Insolitispirillum peregrinum])

HSP 1 Score: 346.3 bits (887), Expect = 1.100e-91
Identity = 196/315 (62.22%), Postives = 245/315 (77.78%), Query Frame = 0 
Query:   32 STLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            S LV+AEH  +   L A+TL+T+ AA    G ITVLVA G G  A A+  AQV G++KVLV + AAY   LAE +  ++  A  AGGYSH+LAP++   KN +PRVAA+ D   ++DV  +V   TFVRP+YAGNA+ATV++S+ALK+LTVRATAFD   ATGGSA +EAAP  AA  AG S+FV + +S+S RPEL SA+++VSGGRG+ + ENF ++E +ADKL  AVGASRAAVD   +PN+ QVGQTGK+VAP+LYVAVGISGAIQHL+GMKDSKVIVAINKD+EAPIFQVADYGLVADLFQA+PEL +++
Sbjct:    2 SILVIAEHDGS--ALKAATLNTLAAAQAIGGDITVLVA-GSGCQAAAQAVAQVAGVAKVLVVDDAAYTHALAEPMGDLV--ASLAGGYSHVLAPATTFGKNFLPRVAALKDVAMLSDVCGVVSADTFVRPIYAGNALATVQSSDALKVLTVRATAFDAVAATGGSAAVEAAP--AAATAGTSSFVGQELSKSERPELTSAKIIVSGGRGMGSGENFVLVEAVADKLGAAVGASRAAVDAGFVPNDYQVGQTGKIVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFQALPELAKEL 309
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_008879663.1 (hypothetical protein H310_13802 [Aphanomyces invadans] >ETV91737.1 hypothetical protein H310_13802 [Aphanomyces invadans])

HSP 1 Score: 345.9 bits (886), Expect = 1.500e-91
Identity = 202/334 (60.48%), Postives = 241/334 (72.16%), Query Frame = 0 
Query:   13 PRQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            P      L + + A  R ASTLVVAEH+    TL+  TLS ITAA    G ITVLV+ G    ++AK+AA V G+  VL A+ A ++  +AE +S ++V  Q    +SHI+APSS  SKN +PRV A LD  P TDV+ +VDE TF RP+YAGNAIATV +S+++KLLTVR T F+KA  TG                 L+ FVSE  S S RP+L +ARVVVSGGRGLK+ ENFA+L TLADKLKGAVGASRAAVD   +PNELQ+GQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQVADYGLV DLF+AVPELTEK+
Sbjct:   15 PIMFQTTLRSFSRASSRFASTLVVAEHNGE--TLTGGTLSAITAASKIGGDITVLVS-GSNTASIAKEAAAVQGVKAVLHADAAQFDHAIAEELSSLVVTIQKGSNFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLSVVDENTFQRPLYAGNAIATVTSSDSVKLLTVRPTGFEKAATTG--XXXXXXXXXXXXXXXLTRFVSEETSSSERPDLTAARVVVSGGRGLKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQIGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVEDLFKAVPELTEKI 343
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: WP_070118690.1 (electron transfer flavoprotein subunit alpha [Pseudohongiella acticola] >OFE11440.1 electron transfer flavoprotein subunit beta [Pseudohongiella acticola])

HSP 1 Score: 345.9 bits (886), Expect = 1.500e-91
Identity = 195/315 (61.90%), Postives = 246/315 (78.10%), Query Frame = 0 
Query:   32 STLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            S LV+AEH  A   L  +TL+TITAA    G ITVLVA G G DAVA+QAA V G+SKVLVA++AAYE  L EN++++I  A+     SHILAP+S   KN +PRVAA+L    ++D+  +    TFVRP+YAGNA+ATV++S+A+K++TVR TAFD+A   GGS  +EA   V + D  ++TFV E +++S RPEL  A++V+SGGRG++  ENFAMLE +ADKL  A+GASRAAVD   +PN++QVGQTGK+VAPDLY+AVGISGAIQHL+GMKDSKVIVAINKD+EAPIFQVADYGLVADLFQA+PEL EK+
Sbjct:    2 SILVIAEHDNA--ALKPATLNTITAASEIGGDITVLVA-GSGCDAVAQQAAAVNGVSKVLVADNAAYENQLPENLAELI--AEVGKDSSHILAPASTSGKNFMPRVAALLGVAQISDITAVKGADTFVRPIYAGNALATVQSSDAVKVITVRGTAFDEAAKEGGSGSVEALDIVKSQD--IATFVGEELTESERPELTGAKIVISGGRGMQNGENFAMLEKVADKLGAAIGASRAAVDAGFVPNDMQVGQTGKIVAPDLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFQAIPELEEKL 309
The following BLAST results are available for this feature:
BLAST of NO01G03020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI54831.18.200e-9561.86hypothetical protein F443_02425 [Phytophthora para... [more]
ETO83594.18.200e-9561.56hypothetical protein F444_02409 [Phytophthora para... [more]
XP_008899656.11.100e-9461.56hypothetical protein PPTG_07242 [Phytophthora para... [more]
XP_009530443.11.800e-9461.86hypothetical protein PHYSODRAFT_354931 [Phytophtho... [more]
POM73979.11.800e-9461.56Electron transfer flavoprotein subunit alpha, mito... [more]
WP_011468475.12.000e-9362.86electron transfer flavoprotein subunit alpha [Sacc... [more]
WP_028466041.15.000e-9261.59electron transfer flavoprotein subunit alpha [Nisa... [more]
WP_076398676.11.100e-9162.22electron transfer flavoprotein subunit alpha [Inso... [more]
XP_008879663.11.500e-9160.48hypothetical protein H310_13802 [Aphanomyces invad... [more]
WP_070118690.11.500e-9161.90electron transfer flavoprotein subunit alpha [Pseu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008023NSK008023Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03020.1NO01G03020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576866gene_303Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100203g10gene1395Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03020.1NO01G03020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03020 ID=NO01G03020|Name=NO01G03020|organism=Nannochloropsis oceanica|type=gene|length=1328bp
AGCACACAGGTTTCCTAACTGTCAAGGACTCCAAGCTTACATCTCGTCGT
CGTCGTCAGCGTCATCTCCTCAACTTAAGAACATGCTTCCGCCATCCCTG
AGGCGCGTGGCCGGGCCCCCGCGACAGCTGCTCCGTGCCTTGACGGCTGC
TGCAGCTGCCGGCATACGCCATGCCTCGACGTTGGTGGTGGCTGAGCACT
CGGCCGCCAAGGGCACTTTGAGCGCCAGTACGCTGAGCACCATCACGGCT
GCAGGCCACTTCAAGGGCCCCATCACAGTGCTGGTGGCGGGCGGACAAGG
ACTGGATGCCGTGGCCAAGCAGGCTGCTCAAGTGGTGGGCATCAGCAAGG
TTTTGGTTGCTGAACACGCAGCTTACGAGAAGGGCCTGGCAGAGAATGTA
AGCCAAGTCATTGTGGCTGCCCAAAACGCCGGCGGCTACTCCCACATTTT
GGCGCCGTCTTCCATGCGCTCCAAGAACATTATTCCCCGTGTGGCGGCTA
TGCTCGACACGCAACCGGTGACCGATGTCATTCAAATTGTCGACGAGGCG
ACATTTGTCCGACCGATGTATGCCGGCAATGCCATCGCGACAGTCAAAAC
CTCGGAGGCCCTCAAACTCCTCACTGTTCGTGCCACTGCATTTGACAAGG
CACCTGCCACGGGAGGGAGCGCCATTATGGAGGCAGCACCAGAGGTTGCT
GCTCCGGATGCTGGGTTGAGTACGTTTGTGAGCGAGAGTGTGAGCCAGTC
TGCTCGGCCAGAGCTGGCGTCGGCACGAGTGGTGGTCTCGGGCGGGCGAG
GGCTGAAGACGAAAGAAAATTTCGCAATGTTGGAGACGTTGGCAGACAAG
CTCAAGGGCGCAGgtatgtatagacagtctttgggtcgtgtactttgtcg
tccgcgtgtatcatgattggaatcctgtgttgatctcgacgtgtgcaagg
cacgcccattgctctgaactcttccctgtcctccttctgcggctcttccc
ctccacataaataccttcaccactaatgtcccttctcccctacctctcct
cgcccaacagTCGGTGCCTCGCGCGCAGCTGTCGATGAATACCACATGCC
TAACGAGCTGCAAGTCGGTCAAACCGGTAAGGTGGTTGCCCCTGACCTCT
ACGTGGCTGTAGGGATCTCAGGTGCAATTCAGCATCTGTCTGGCATGAAG
GACAGCAAGGTAATCGTGGCCATCAATAAGGATAAGGAGGCCCCCATTTT
CCAAGTTGCGGACTATGGGTTGGTCGCTGATTTGTTTCAGGCGGTGCCAG
AGTTGACGGAAAAGGTCTAATGACGTGA
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protein sequence of NO01G03020.1

>NO01G03020.1-protein ID=NO01G03020.1-protein|Name=NO01G03020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp
MLPPSLRRVAGPPRQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSAST
LSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEK
GLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVI
QIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIME
AAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAML
ETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAI
QHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV*
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Synonyms
Publications