NO01G03020, NO01G03020 (gene) Nannochloropsis oceanica

Overview
NameNO01G03020
Unique NameNO01G03020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1328
Alignment locationchr1:792286..793613 +

Link to JBrowse

Properties
Property NameValue
DescriptionElectron transfer flavoprotein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:792286..793613 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029035DHS-like_NAD/FAD-binding_dom
IPR014731ETF_asu_C
IPR014730ETF_a/b_N
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Homology
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: EWM29227.1 (electron transfer flavoprotein [Nannochloropsis gaditana])

HSP 1 Score: 496.5 bits (1277), Expect = 6.700e-137
Identity = 272/346 (78.61%), Postives = 303/346 (87.57%), Query Frame = 0 
Query:    1 MLPPSLRRVAGPPRQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            ML   L  V+  PR+ +  L   +  G R ASTLVVAEHS +KGTLS STL TITAAG  + P+TVLVAGG+G++AVA+QAAQV G+SKVLVAEHAAYEKG+AEN+SQ +VA   AG YSHILAPSSMRSKN +PRVAA+LD+QP+TDVI I D+ATFVRPMYAGNAIATV TSE LK+LTVR TAF+KAP+TGGSA  E AP VA P+AGLS F+SESVSQSARPEL+SARVV+SGGRGLKTKE+F MLE LADKLKGAVGASRAAVDE+HMPNELQVGQTGKVVAPDLY+AVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELT+KV
Sbjct:   66 MLRRPLLTVSAQPRRFVGVL--MSRFGTRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGVNAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMRSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVAPAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTDKV 409
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: OQS05871.1 (electron transfer flavoprotein subunit alpha, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 376.3 bits (965), Expect = 1.000e-100
Identity = 218/330 (66.06%), Postives = 260/330 (78.79%), Query Frame = 0 
Query:   17 LRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            LRAL+  ++A  R ASTLVVAEH+  K  L+  TL  ITAA    G ITVLV+ G    AVA++AA V G+  VL A++A Y+  +AE V+ ++ A Q A  +SHILAPSS  SKN +PR+ A LD  P+TDV+ +VDE TF RPMYAGNAIATVK+++A+K++T+R T FDKA  TGGSA + AAPE AAP A L+ FVSE  S S RP+LASARVVVSGGRG+K+ ENFAMLETLADKLKGAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQV+DYG+V DLF+ VPELTEK+
Sbjct:    6 LRALSKLSSA--RFASTLVVAEHAGQK--LTGGTLGAITAASKIGGDITVLVS-GSNTAAVAQEAAAVQGVKNVLHADNAQYDHSIAEEVTNLVAAVQAANNFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDEDTFQRPMYAGNAIATVKSTDAVKVMTIRPTGFDKAATTGGSATVSAAPE-AAP-ANLTKFVSEETSTSDRPDLASARVVVSGGRGMKSGENFAMLETLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_008614384.1 (electron transfer flavoprotein alpha subunit [Saprolegnia diclina VS20] >EQC31982.1 electron transfer flavoprotein alpha subunit [Saprolegnia diclina VS20])

HSP 1 Score: 375.2 bits (962), Expect = 2.200e-100
Identity = 219/330 (66.36%), Postives = 258/330 (78.18%), Query Frame = 0 
Query:   17 LRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            LRAL+  +AA  R ASTLVVAEH+  K  L+  TLS ITAA    G ITVLV+ G    A+A++AA V G+  VL A+ A Y+  +AE V+ ++ A Q A  +SHILAPSS  SKN +PR+ A LD  P+TDV+ +VDE TF RPMYAGNAIATV +S+A+KL+T+R T F+KA ATGGSA + AAP  AAP A L+ FVSE  S S RP+LASARVVVSGGRG+K+ ENFAML TLADKLKGAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQV+DYGLV DLF+ VPELTEK+
Sbjct:    6 LRALSKLSAA--RFASTLVVAEHAGQK--LTGGTLSAITAASKIGGDITVLVS-GSNTAAIAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVSAAP-TAAP-ANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFAMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDGEAPIFQVSDYGLVDDLFKVVPELTEKI 328
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: OQR87129.1 (electron transfer flavoprotein subunit alpha, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 374.0 bits (959), Expect = 5.000e-100
Identity = 214/330 (64.85%), Postives = 257/330 (77.88%), Query Frame = 0 
Query:   17 LRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            LR L+  +AA  R ASTLVVAEH+  K  L+  TLS ITAA    G ITVLV+ G    AVA++AA V G+  VL A++A ++  +AE ++ ++ A Q+A  +SHILAPSS  SKN +PR+ A LD  P TDV+ +VDE+TF RPMYAGNAIATV +S+A+KL+T+R T FDKA +TGGS  + AAP VA   A L+ FVSE  S S RP+LASARVVVSGGRG+K+ ENFAML TLADKLKGAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQV+DYG+V DLF+ VPELTEK+
Sbjct:    6 LRTLSKFSAA--RFASTLVVAEHAGQK--LTGGTLSAITAASKIGGDITVLVS-GSNTGAVAQEAAAVAGVKAVLHADNAQFDHAIAEEITNLVAAVQSASSFSHILAPSSNISKNFVPRLGAALDVAPFTDVLAVVDESTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFDKAASTGGSGAVSAAPAVA--PANLTKFVSEETSASDRPDLASARVVVSGGRGMKSGENFAMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_012200463.1 (hypothetical protein SPRG_05791 [Saprolegnia parasitica CBS 223.65] >KDO28920.1 hypothetical protein SPRG_05791 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 372.9 bits (956), Expect = 1.100e-99
Identity = 218/330 (66.06%), Postives = 257/330 (77.88%), Query Frame = 0 
Query:   17 LRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            LRAL+  +AA  R ASTLVVAEH+  K  L+  TLS ITAA    G ITVLV+ G    AVA++AA V G+  VL A+ A Y+  +AE V+ ++ A Q A  +SHILAPSS  SKN +PR+ A LD  P+TDV+ +VDE TF RPMYAGNAIATV +S+A+KL+T+R T F+KA ATGGSA + AAP  AAP A L+ FVSE  S S RP+LASARVVVSGGRG+K+ ENF ML TLADKLKGAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQV+DYG+V DLF+ VPELTEK+
Sbjct:    6 LRALSKLSAA--RFASTLVVAEHAGQK--LTGGTLSAITAASKIGGDITVLVS-GSNTAAVAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVSAAP-TAAP-ANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_009840076.1 (hypothetical protein H257_14051 [Aphanomyces astaci] >ETV70364.1 hypothetical protein H257_14051 [Aphanomyces astaci])

HSP 1 Score: 364.4 bits (934), Expect = 4.000e-97
Identity = 207/327 (63.30%), Postives = 248/327 (75.84%), Query Frame = 0 
Query:   20 LTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            L + + A  R ASTLVVAEH+     L+  TLS ITAA    G ITVLV+G    + +AK+AA V G+  VL A+ A ++  +AE +S ++V  Q    +SHI+APSS  SKN  PRV A LD  P TDV+ +VDE TF RP+YAGNAIATV +S+++KLLTVR T F+KA  TGGS ++ AAP   AP A L+ FVSE  S S RP+L +ARVVVSGGRGLK+ ENFA+L TLADKLKGAVGASRAAVD   +PNELQ+GQTGKVVAP+LY+AVGISGAIQHL+GMKDSK IVAINKD EAPIFQVADYGLV DLF+A+PELTEK+
Sbjct:    6 LRSFSRASSRFASTLVVAEHNGE--ALTGGTLSAITAASKIGGDITVLVSGSNTAN-IAKEAAAVQGVKSVLHADAAQFDHAIAEELSSLVVTIQKGSNFSHIVAPSSNISKNFFPRVGAALDVAPFTDVLTVVDENTFQRPLYAGNAIATVTSSDSVKLLTVRPTGFEKAAVTGGSGVVSAAP--TAPAANLTRFVSEETSSSERPDLTAARVVVSGGRGLKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQIGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVEDLFKALPELTEKI 327
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: GAY06428.1 (Hypothetical protein PINS_014232 [Pythium insidiosum])

HSP 1 Score: 364.0 bits (933), Expect = 5.200e-97
Identity = 208/331 (62.84%), Postives = 254/331 (76.74%), Query Frame = 0 
Query:   16 LLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            L R      A   R  STLV+AEH+  +  +S STLS +TAA    G +T+LV G Q  DAVA+ AA++ G+S VL A+ A Y+  LAE+V++++VA Q    +SHILAPSS  SKN +PR+ A LDT P++D+I + D+ TF+RP YAGNAIA VK+ +A+K++TVR T F+KA A GG+A + AAPE AA   G S FVSE VS+S RP+L +ARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVAVGISGAIQHL+GMKDSK IVAINKD+EAPIFQV+DYGLVADLF AVPELTEK+
Sbjct:    2 LARQFVRRVATVNRSFSTLVIAEHNQKE--VSGSTLSAVTAASKIGGDVTLLVLGSQA-DAVAQSAAKIAGVSNVLHAKDAKYDHLLAEDVTELLVATQKEKSFSHILAPSSNASKNYLPRLGAKLDTAPISDIIAVADKDTFLRPTYAGNAIAQVKSKDAVKIITVRPTGFEKAAAEGGNAAVAAAPEAAA--TGKSQFVSEEVSKSERPDLTAARVVISGGRGLKSGENFDMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 327
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: XP_002900251.1 (electron transfer flavoprotein subunit alpha, mitochondrial precursor [Phytophthora infestans T30-4] >EEY60455.1 electron transfer flavoprotein subunit alpha, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 361.3 bits (926), Expect = 3.300e-96
Identity = 203/315 (64.44%), Postives = 245/315 (77.78%), Query Frame = 0 
Query:   32 STLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            STLVVAEH+ ++  +S  TL+T++AA    G ITVLV G Q   A A+ AA+V G+  VL A  A Y+  +AE V++++VAAQ AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA +K+ +A+KL+TVR T F+KA A GGSA +  APE  AP  G ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    2 STLVVAEHNQSQ--ISGPTLATVSAASQIGGDITVLVLGSQAGPA-AEAAAKVAGVKSVLHAADAKYDHYVAEEVAELLVAAQKAGNYSHVLAPSSNASKNYLPRAGAKLDVAPISDIVAVADKDTFFRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAAAEGGSASVSPAPE--APTVGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFTAVPELTEKI 311
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: KUF84248.1 (Electron transfer flavoprotein subunit alpha [Phytophthora nicotianae])

HSP 1 Score: 359.0 bits (920), Expect = 1.700e-95
Identity = 202/315 (64.13%), Postives = 247/315 (78.41%), Query Frame = 0 
Query:   32 STLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            STLVVAEH+ ++  +S +TL+T++AA    G IT+LV G Q   A A+ AA+V G++ VL A    Y+  +AE V++++VAAQ AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA VK+ +A+KL+TVR T F+KA A GG+A +  APE  AP AG ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    2 STLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQAGPA-AEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNASVSPAPE--APTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 311
[Close]
BLAST of NO01G03020 vs. NCBI_GenBank
Match: ETM54360.1 (hypothetical protein L914_02295 [Phytophthora parasitica])

HSP 1 Score: 357.1 bits (915), Expect = 6.300e-95
Identity = 206/333 (61.86%), Postives = 254/333 (76.28%), Query Frame = 0 
Query:   14 RQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSASTLSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEKGLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVIQIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIMEAAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAMLETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV 347
            RQ++R + A         STLVVAEH+ ++  +S +TL+T++AA    G IT+LV G Q   A A+ AA+V G++ VL A    Y+  +AE V++++VAAQ AG YSH+LAPSS  SKN +PR  A LD  P++D++ + D+ TF RP YAGNAIA VK+ +A+KL+TVR T F+KA A GG+A +  APE  AP AG ++FVSE VS+S RP+LASARVV+SGGRGLK+ ENF ML  LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LYVA GISGAIQHL+GMKDSK IVAINKD+EAPIFQVADYGLV DLF AVPELTEK+
Sbjct:    4 RQIIRRV-ATQTPRSAAMSTLVVAEHNQSQ--ISGATLATVSAATQIGGDITMLVLGSQAGPA-AEAAAKVAGVTNVLHAADPKYDHCVAEEVAELLVAAQKAGDYSHVLAPSSNASKNYLPRAGAKLDVAPISDIVAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNASVSPAPE--APTAGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKI 330
The following BLAST results are available for this feature:
BLAST of NO01G03020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29227.16.700e-13778.61electron transfer flavoprotein [Nannochloropsis ga... [more]
OQS05871.11.000e-10066.06electron transfer flavoprotein subunit alpha, mito... [more]
XP_008614384.12.200e-10066.36electron transfer flavoprotein alpha subunit [Sapr... [more]
OQR87129.15.000e-10064.85electron transfer flavoprotein subunit alpha, mito... [more]
XP_012200463.11.100e-9966.06hypothetical protein SPRG_05791 [Saprolegnia paras... [more]
XP_009840076.14.000e-9763.30hypothetical protein H257_14051 [Aphanomyces astac... [more]
GAY06428.15.200e-9762.84Hypothetical protein PINS_014232 [Pythium insidios... [more]
XP_002900251.13.300e-9664.44electron transfer flavoprotein subunit alpha, mito... [more]
KUF84248.11.700e-9564.13Electron transfer flavoprotein subunit alpha [Phyt... [more]
ETM54360.16.300e-9561.86hypothetical protein L914_02295 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008023NSK008023Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03020.1NO01G03020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576866gene_303Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100203g10gene1395Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03020.1NO01G03020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03020 ID=NO01G03020|Name=NO01G03020|organism=Nannochloropsis oceanica|type=gene|length=1328bp
AGCACACAGGTTTCCTAACTGTCAAGGACTCCAAGCTTACATCTCGTCGT
CGTCGTCAGCGTCATCTCCTCAACTTAAGAACATGCTTCCGCCATCCCTG
AGGCGCGTGGCCGGGCCCCCGCGACAGCTGCTCCGTGCCTTGACGGCTGC
TGCAGCTGCCGGCATACGCCATGCCTCGACGTTGGTGGTGGCTGAGCACT
CGGCCGCCAAGGGCACTTTGAGCGCCAGTACGCTGAGCACCATCACGGCT
GCAGGCCACTTCAAGGGCCCCATCACAGTGCTGGTGGCGGGCGGACAAGG
ACTGGATGCCGTGGCCAAGCAGGCTGCTCAAGTGGTGGGCATCAGCAAGG
TTTTGGTTGCTGAACACGCAGCTTACGAGAAGGGCCTGGCAGAGAATGTA
AGCCAAGTCATTGTGGCTGCCCAAAACGCCGGCGGCTACTCCCACATTTT
GGCGCCGTCTTCCATGCGCTCCAAGAACATTATTCCCCGTGTGGCGGCTA
TGCTCGACACGCAACCGGTGACCGATGTCATTCAAATTGTCGACGAGGCG
ACATTTGTCCGACCGATGTATGCCGGCAATGCCATCGCGACAGTCAAAAC
CTCGGAGGCCCTCAAACTCCTCACTGTTCGTGCCACTGCATTTGACAAGG
CACCTGCCACGGGAGGGAGCGCCATTATGGAGGCAGCACCAGAGGTTGCT
GCTCCGGATGCTGGGTTGAGTACGTTTGTGAGCGAGAGTGTGAGCCAGTC
TGCTCGGCCAGAGCTGGCGTCGGCACGAGTGGTGGTCTCGGGCGGGCGAG
GGCTGAAGACGAAAGAAAATTTCGCAATGTTGGAGACGTTGGCAGACAAG
CTCAAGGGCGCAGgtatgtatagacagtctttgggtcgtgtactttgtcg
tccgcgtgtatcatgattggaatcctgtgttgatctcgacgtgtgcaagg
cacgcccattgctctgaactcttccctgtcctccttctgcggctcttccc
ctccacataaataccttcaccactaatgtcccttctcccctacctctcct
cgcccaacagTCGGTGCCTCGCGCGCAGCTGTCGATGAATACCACATGCC
TAACGAGCTGCAAGTCGGTCAAACCGGTAAGGTGGTTGCCCCTGACCTCT
ACGTGGCTGTAGGGATCTCAGGTGCAATTCAGCATCTGTCTGGCATGAAG
GACAGCAAGGTAATCGTGGCCATCAATAAGGATAAGGAGGCCCCCATTTT
CCAAGTTGCGGACTATGGGTTGGTCGCTGATTTGTTTCAGGCGGTGCCAG
AGTTGACGGAAAAGGTCTAATGACGTGA
back to top

protein sequence of NO01G03020.1

>NO01G03020.1-protein ID=NO01G03020.1-protein|Name=NO01G03020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp
MLPPSLRRVAGPPRQLLRALTAAAAAGIRHASTLVVAEHSAAKGTLSAST
LSTITAAGHFKGPITVLVAGGQGLDAVAKQAAQVVGISKVLVAEHAAYEK
GLAENVSQVIVAAQNAGGYSHILAPSSMRSKNIIPRVAAMLDTQPVTDVI
QIVDEATFVRPMYAGNAIATVKTSEALKLLTVRATAFDKAPATGGSAIME
AAPEVAAPDAGLSTFVSESVSQSARPELASARVVVSGGRGLKTKENFAML
ETLADKLKGAVGASRAAVDEYHMPNELQVGQTGKVVAPDLYVAVGISGAI
QHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFQAVPELTEKV*
back to top
Synonyms
Publications