NO01G03010, NO01G03010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03010 vs. NCBI_GenBank
Match: CBJ33840.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.3 bits (194), Expect = 1.800e-11 Identity = 57/217 (26.27%), Postives = 101/217 (46.54%), Query Frame = 0 Query: 19 SSMPARIAELDAVLHSAPFGKSIAEI-------MAQSRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRG 229 +++P ++ ++ A+L + S+A+I + S S N + L R+ + +T+ L + W++++VPK+ DG NFGV+V L+V K I++ + +L ++P YF RA A DK+ + S + XXXX PD H++ALD K+F + + + + D++EKN L P+G Sbjct: 17 ANLPEQVGKMQALLEAEFAYTSLADIESGFKQLLTSSGGSATENANMGALLSTVRNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKG 233
BLAST of NO01G03010 vs. NCBI_GenBank
Match: XP_002909585.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58399.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 79.3 bits (194), Expect = 1.800e-11 Identity = 61/230 (26.52%), Postives = 103/230 (44.78%), Query Frame = 0 Query: 17 LRSSMPARIAELDAVLHS-------APFGKSIAEIMAQSRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF 240 L S +P R+A++ A+L + A+ + + A+V+SN EV L V D + + + + + W++++VPKV DG NFGV V +++ L+ K D + Y S RA AV+K+ A+ K ++S +A D + VV +D K++ R +E + Y D++ KN + PRG K D + +MF Sbjct: 15 LLSELPQRVAQVQALLEQHAGERTPSKLRTKFAQAVLAAPAAVSSNGEVQALLTVVGDEVAQLISTIQQLQVWIQVQVPKVEDGNNFGVEVQKYAFVHLKEALERWQKTWDSMADYSSARATAVEKLNAKAXXXXXXXXXXXXXXXXXXXXXXKSVTAKVEKQSNAGTKAPEDAIAAVVEIDIKWYFNLARALEGVRDQYAVTEDVIFKNKEKIELPRG-KNDRAGFNMF 243
BLAST of NO01G03010 vs. NCBI_GenBank
Match: OWZ14487.1 (Proteasome activator subunit 1 [Phytophthora megakarya]) HSP 1 Score: 76.3 bits (186), Expect = 1.500e-10 Identity = 64/230 (27.83%), Postives = 101/230 (43.91%), Query Frame = 0 Query: 17 LRSSMPARIAELDAVLHSAPFGKS-------IAEIMAQSRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF 240 L S +P R A++ ++ +S A+ + + A+V SN EV L V D + + + L L+ W++L+VPKV DG NFGV V +++ L+ K D + Y S RA V+K+ A+ ++S N+A D + VV LD K++ R +E + Y DI+ KN + PRG K D + +MF Sbjct: 15 LLSELPQRGAKVQTLVQQHAGERSPSQLRTKFAQNVLAAPAAVGSNGEVQALLAVVGDEVAQLMSALQLLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSVADYSSARATTVEKLNAKAXXXXXXXXXXXXXXXXXXXXXXXSVTAKVEKQSNTGNQAPEDAVAAVVELDIKWYFNLARALEGVRDQYAVTEDIITKNKEKIELPRG-KNDRAGFNMF 243
BLAST of NO01G03010 vs. NCBI_GenBank
Match: POM80693.1 (Proteasome activator pa28 REG alpha beta subunit [Phytophthora palmivora var. palmivora]) HSP 1 Score: 74.3 bits (181), Expect = 5.700e-10 Identity = 60/230 (26.09%), Postives = 102/230 (44.35%), Query Frame = 0 Query: 17 LRSSMPARIAELDAVLHSAPFGKSIAEIMAQ-------SRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF 240 L S +P R+ ++ ++ +S +++ A+ + A+V SN +V L V D + + + + + W++L+VPKV DG NFGV V +++ L+ K D L Y S R AV+K+ A+ ++S ++A D + VV LD K++ R +E + Y DI+ KN + PRG K D + +MF Sbjct: 15 LLSELPHRVTQVQTLVQQHAAERSPSKLRAKFAQNVLAAPAAVGSNGDVQALLAVVGDEVAQLMSAIQQLQLWIQLQVPKVEDGNNFGVEVQKYAFVHLKEALEKWQKTWDSLADYSSARTTAVEKLNAKAXXXXXXXXXXXXXXXXXXXXXXXXVTAKVEKQSNAGSQAAEDAIAAVVELDVKWYFNLVRALEGVRDQYAVTEDIIIKNQEKIELPRG-KNDRAGFNMF 243
BLAST of NO01G03010 vs. NCBI_GenBank
Match: POM63751.1 (Proteasome activator pa28, REG alpha/beta subunit domain containing hypothetical protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 73.9 bits (180), Expect = 7.400e-10 Identity = 61/235 (25.96%), Postives = 102/235 (43.40%), Query Frame = 0 Query: 5 SILDSYQQKLTDLRSSMPARIAELDAVLHSAPFGKSIAEIMAQSRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF 240 ++L ++T +++ + +AE A F A+ + + A V SN +V L V D + + + + + W++L+VPKV DG NFGV V +++ L+ K D L Y S R AV+K+ A+ ++S ++A D + VV LD K++ R +E + Y DI+ KN + PRG K D + +MF Sbjct: 14 ALLSELPHRVTQVQTLVQQHVAERSPSKLRAKF----AQTVLAAPAGVGSNGDVQALLAVVGDEVAQLMSAIQQLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSLADYSSARTTAVEKLNAKAXXXXXXXXXXXXXXXXXXXXXXXXVTAKVEKQSNAGSQAAEDAIAAVVELDVKWYFNLVRALEGVRDQYAVTEDIIIKNQEKIELPRG-KNDRAGFNMF 243
BLAST of NO01G03010 vs. NCBI_GenBank
Match: XP_009514393.1 (hypothetical protein PHYSODRAFT_553779 [Phytophthora sojae] >EGZ27118.1 hypothetical protein PHYSODRAFT_553779 [Phytophthora sojae]) HSP 1 Score: 73.2 bits (178), Expect = 1.300e-9 Identity = 66/244 (27.05%), Postives = 105/244 (43.03%), Query Frame = 0 Query: 7 LDSYQQKLT----DLRSSMPARIAELDAVLHSAPFGKSIAEIMAQSRASVASNPEVAGS-------LGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF 240 +D Y++ +T L S +P R+A + A++ +S + + A+ +V + P GS L V D + + + + + W++L+VPKV DG NFGV V +++ LD K D L Y S RA AV+K+ A+ + XXXX VV LD K++ R +E + Y D++ KN + PRG K D + +MF Sbjct: 1 MDEYKKSVTAAGAALLSELPQRVAHVQALVQQHAAERSPSAVRAKFAQAVLAAPSAVGSNGGVQSLLAVVGDEVAKLLSAIAQLQLWIQLQVPKVEDGNNFGVEVQKYAYVQLKEALDKWQKTWDALADYSSARASAVEKLNAKATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNQEKIELPRG-KNDRAGFNMF 243
BLAST of NO01G03010 vs. NCBI_GenBank
Match: XP_024581554.1 (proteasome activator subunit 1 [Plasmopara halstedii] >CEG45185.1 proteasome activator subunit 1 [Plasmopara halstedii]) HSP 1 Score: 73.2 bits (178), Expect = 1.300e-9 Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0 Query: 17 LRSSMPARIAELDAVLHS-------APFGKSIAEIMAQSRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPR 228 L S +P R+A + ++ + A+++ + ASV+SN +V L V D + + + + L+ W++L VPKV DG NFGV V +++ L+ K D L Y S RA AV+K+ A ++S N+A D L VV +D K++ R +E + Y D++ KN + PR Sbjct: 15 LLSELPQRVAHVHTLVQQYASERAPSKLRAKFAQMVLAAPASVSSNGDVQALLAVVGDEVAQLMSSIQLLQVWIQLLVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSLADYSSARATAVEKLNAXXXXXXXXXXXXXXXXXXXXXXXXXSVTAKVEKQSNTGNKAPEDALAAVVEIDIKWYFNLLRALEGVRDQYAVTEDVINKNKEKIELPR 232
BLAST of NO01G03010 vs. NCBI_GenBank
Match: XP_014148986.1 (hypothetical protein SARC_12383, partial [Sphaeroforma arctica JP610] >KNC75084.1 hypothetical protein SARC_12383, partial [Sphaeroforma arctica JP610]) HSP 1 Score: 72.4 bits (176), Expect = 2.100e-9 Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 0 Query: 102 LEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEAL-PDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHL 237 +EV+K I++ D LN +DDLP YF++R G +KV +T IKESK+ + KDG + + E+ST + PD + ++A+D KF+ R ++ A + + + +N+ L P+G G + H+ Sbjct: 1 MEVLKAIKEITDNLNGKIDDLPEYFNKRVGVWEKVTPKTDRTIKESKTTTDE--DKDGTKEHKNVSTKLEESTSSTPFINPDCYQALLAIDVKFYVQLHRLLQQAYDAAIISANTIARNHDKLTNPKGSGGGAHHM 134
BLAST of NO01G03010 vs. NCBI_GenBank
Match: GAX27907.1 (hypothetical protein FisN_21Hh257 [Fistulifera solaris]) HSP 1 Score: 72.4 bits (176), Expect = 2.100e-9 Identity = 61/233 (26.18%), Postives = 111/233 (47.64%), Query Frame = 0 Query: 5 SILDSYQQKLTDLRSSMPARIAELDAVLHSAPFGKSIAEIMAQSRASVAS-----NPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTST-DIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKG 232 ++ ++Y++ L ++ PA L ++ + + + MA +RA AS N E+ ++ D + ++DL + ++ L +PK+ DGGN+GV++ LE +K ++ D L K +++ Y S RA ++K + T + S S++T D XXXX ++ + VVA D ++ K +LC S+YL D +KN + P+G G Sbjct: 6 AVQETYKKNALALIAASPATAQTL-----ASTYQQHFSTNMAGARAKYASLTGLVNAELDQTVETTIDAVDAVMDDLNTLMRYISLTIPKMEDGGNWGVSIQLEAIKAMQDAQDKLTKGAEEVSKYASSRADVLEKCKFPSQTVSVTSSDGTSNTTEKGDXXXXXXXXXXXXXXTSLSPVEASYRQAAVVACDVLYYGKAKGLFQLCLSSYLNAMDFCDKNAEKIEKPKGSTG 233
BLAST of NO01G03010 vs. NCBI_GenBank
Match: ETI50831.1 (hypothetical protein F443_05701 [Phytophthora parasitica P1569] >ETK90712.1 hypothetical protein L915_05563 [Phytophthora parasitica] >ETL44120.1 hypothetical protein L916_05505 [Phytophthora parasitica] >ETL97292.1 hypothetical protein L917_05391 [Phytophthora parasitica] >ETM50442.1 hypothetical protein L914_05514 [Phytophthora parasitica] >ETO79560.1 hypothetical protein F444_05753 [Phytophthora parasitica P1976] >ETP20571.1 hypothetical protein F441_05709 [Phytophthora parasitica CJ01A1] >ETP48530.1 hypothetical protein F442_05748 [Phytophthora parasitica P10297] >KUF76930.1 Proteasome activator complex subunit 3 [Phytophthora nicotianae] >KUF99769.1 13 kDa ribonucleoprotein-associated protein [Phytophthora nicotianae]) HSP 1 Score: 69.7 bits (169), Expect = 1.400e-8 Identity = 59/230 (25.65%), Postives = 98/230 (42.61%), Query Frame = 0 Query: 17 LRSSMPARIAELDAVLHSAPFGKS-------IAEIMAQSRASVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAVVLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSKSSSTGGKDGDETKGSEXXXXEKSTKKNEALPDQLEHVVALDAKFFTIFKRDVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF 240 L +P R+A + ++ +S A+ + + A+V+SN EV L V D + + + + W++L+VPKV DG NFGV V +++ L+ K D Y S RA AV+K+ A+ ++S +A D + VV +D K++ R +E + Y D++ KN + PRG K D + +MF Sbjct: 15 LLDELPRRVALVQELVQQHAGERSPSKLRTKFAQAVLAAPAAVSSNGEVQALLTVVGDEVAHLMSAIQQLQVWIQLQVPKVEDGNNFGVEVQKYAFVHLKEALEKWQKTWDSFADYSSVRATAVEKLNAKAXXXXXXXXXXXXXXXXXXXXXXXXVTATVEKQSNAGTKAPEDAIASVVEIDIKWYFNLVRALEGVRDQYAVTEDVITKNKEKIELPRG-KNDRAGFNMF 243 The following BLAST results are available for this feature:
BLAST of NO01G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03010 ID=NO01G03010|Name=NO01G03010|organism=Nannochloropsis oceanica|type=gene|length=1498bpback to top protein sequence of NO01G03010.1 >NO01G03010.1-protein ID=NO01G03010.1-protein|Name=NO01G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bpback to top Synonyms
Publications
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