NO01G02960, NO01G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02960 vs. NCBI_GenBank
Match: EWM29223.1 (e3 ubiquitin ligase [Nannochloropsis gaditana]) HSP 1 Score: 312.4 bits (799), Expect = 1.800e-81 Identity = 182/360 (50.56%), Postives = 225/360 (62.50%), Query Frame = 0 Query: 13 RHCADCDQHYETRDRLCPTCGAAFV-PTANPSAQPDPWFAGGGYPGDDLPISRPEREAQQQFGDAAWLEGRPDINNLPEAMQQRILELING-------HGLDVE-----GREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAK----IEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + C DC+Q Y+TRDRLCP CGAAF P A SA P+ R + E + + +G +L E + RIL L G G D++ R G G NGLS+EDI +LP SQLH+TSSML+SV +TLES + + +TMECIPGSFSPIP G L+ PL AD LPLR++ + KVLV QRGKQTFGAML AAR A GVVV+NS+ LWPYLMRDG+GEA+ + A E + A CFIVMVSQ HG+ELLRRL + + T L LA + VERECLICI +F E +TILRLPCQH+YH +CARKWL+L++TCPACR ++K RR Sbjct: 7 KRCDDCNQTYDTRDRLCPICGAAFPNPVAPASAH--------------APLLRLQSEQANEPSSSHAFQGE-ITTHLAERL--RILLLQGGWIGESDAFGGDIDLERLLSRGDGLGGGNGLSDEDIDRLPRSQLHSTSSMLISVTLTLESDEVESDITMECIPGSFSPIPPDGALIDLVPTVPLTADALPLRHRSTYRDKVLVMQRGKQTFGAMLRAAREVEARGVVVVNSLPLWPYLMRDGRGEARLVEHLSARGGEQKAASCFIVMVSQGHGQELLRRLDAGRATEETP----GKPLAARLAASRVERECLICICSFAEGETILRLPCQHSYHADCARKWLALQKTCPACRTQIKTRR 345
BLAST of NO01G02960 vs. NCBI_GenBank
Match: CBN76628.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 127.5 bits (319), Expect = 8.400e-26 Identity = 79/235 (33.62%), Postives = 118/235 (50.21%), Query Frame = 0 Query: 122 EEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAKIEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRRE 357 E+ + LP Q+ S +L + L G L++E + FSP PS+ ++ + P AD L N+ +G VL+ RG TF + + A AAGA VV+ + +WPY+M D KGEA E G + + MVS+ GE + + A T+ A L+V+ E++C++C + + +T++RLPC H YHE C KWL L TCP CR E+ E Sbjct: 69 EQVVKDLPRIQVEENSWVLHQTVLRLTGGGAGSELSIEAVFAPFSPPPSEKVLGPVVLSVPPTAD-KDLENEADVEGSVLLMDRGVCTFASKALRANAAGAAAAVVVQTHDVWPYVMEDSKGEA------EAGGGLNIPVCMVSKEKGEAIKAAVVRSA---AEGKTIRAE-----LSVSSSEKDCIVCQELYAVGNTLVRLPCGHLYHEACLLKWLKLSNTCPYCRRELPSSNE 288
BLAST of NO01G02960 vs. NCBI_GenBank
Match: XP_009520597.1 (hypothetical protein PHYSODRAFT_555187 [Phytophthora sojae] >EGZ25309.1 hypothetical protein PHYSODRAFT_555187 [Phytophthora sojae]) HSP 1 Score: 110.5 bits (275), Expect = 1.100e-20 Identity = 79/266 (29.70%), Postives = 121/266 (45.49%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAKIEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + +Q ++ L+ G D G G G R S+E + L S++ ++V + G+ + IPG+F P S + +L+ ADP P RN + K++V RG TF ++ A+ AG GVV+I +V +WPY M D GE+K G F M+S G ++ L D +A V V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 76 QELQAMVIRLLTQIGGDWNG--GDTGARRPASDEAVKNLGSFAADQASTIEVAVVVKGIKGE------VIAIPGNFGPCESLK-ERKLVVADP-FDGAKPFRNASDMKDKIVVMARGGCTFARKVLRAQDAGVAGVVIIQTVDVWPYTMTDSTGESK-------GVTIPAF--MMSAKVGNGFVKFLRGKRDEDVSADIV----------VRKDARECVICQVEMSIGMKVTRMPCQHMFHTACLHEWLQIGNSCPICRVEIAAKR 312
BLAST of NO01G02960 vs. NCBI_GenBank
Match: OWZ04867.1 (hypothetical protein PHMEG_00023156 [Phytophthora megakarya]) HSP 1 Score: 109.4 bits (272), Expect = 2.400e-20 Identity = 77/268 (28.73%), Postives = 122/268 (45.52%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAKIEAGKEEGQIADCFI--VMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 +AM +R+L I G + G G R S+E + L S++ ++V + G+ + +PG+F P S + ++ ADP P +N + K++V RG TF ++ ++AAGA GV++I +V +WPY M D GE+K D I M+S G + L S D +A + V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 80 QAMVERLLTQIGG-----DWNGGDTGARRPASDEAVKNLGSFAADQASTIEVAVIVKGIKGE------VIAVPGNFGPCESLK-ERNVVVADP-FDGAKPFQNANEMKNKIVVMARGGCTFARKVLRSQAAGAAGVIIIQTVDVWPYTMTDSSGESK-----------DVTIPAFMMSAKVGNGFVDFLGSKCDEDVSADII----------VRKDARECVICQVEMSIGMKVTRMPCQHMFHTACLHEWLQIGNSCPICRVEIAAKR 313
BLAST of NO01G02960 vs. NCBI_GenBank
Match: ETP44799.1 (hypothetical protein F442_08676 [Phytophthora parasitica P10297]) HSP 1 Score: 108.2 bits (269), Expect = 5.300e-20 Identity = 73/269 (27.14%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAK---IEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + +Q ++ L+ G D G G G R S+E + L + + V + +E G+ + IPG+F P S + ++ ADP P +N + K++V RG TF ++ A+AAGA GV++I +V +WPY M D GE+K I A ++ F+ + E +++ + V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 74 QELQAMVMRLLTEIGNDWNG-GGDTGARRPASDEAVTN--LGSFTADQASTIEVAVVVEGIKGE----VIAIPGNFGPCESLK-KCSVVIADP-FDGAKPFQNANEMKNKIVVMTRGGCTFAQKVLRAQAAGAAGVIIIQTVDVWPYTMTDSTGESKDVTIPAFMMSAKVGKGFVEFIRAKRDE----------------------SVSADIIVRKDARECVICQVEMSIGMKVTRMPCQHMFHTGCLHEWLQIGNSCPICRVEIAAKR 311
BLAST of NO01G02960 vs. NCBI_GenBank
Match: ETI46936.1 (hypothetical protein F443_08742 [Phytophthora parasitica P1569] >ETK86881.1 hypothetical protein L915_08570 [Phytophthora parasitica] >ETL40294.1 hypothetical protein L916_08500 [Phytophthora parasitica] >ETL93442.1 hypothetical protein L917_08399 [Phytophthora parasitica] >ETP16736.1 hypothetical protein F441_08719 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 107.8 bits (268), Expect = 6.900e-20 Identity = 73/269 (27.14%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAK---IEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + +Q ++ L+ G D G G G R S+E + L + + V + +E G+ + IPG+F P S + ++ ADP P +N + K++V RG TF ++ A+AAGA GV++I +V +WPY M D GE+K I A ++ F+ + E +++ + V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 74 QELQAMVMRLLTEIGNDWNG-GGDTGARRPASDEAVRN--LGSFTADQASTIEVAVVVEGIKGE----VIAIPGNFGPCESLK-KCSVVIADP-FDGAKPFQNANEMKNKIVVMARGGCTFAQKVLRAQAAGAAGVIIIQTVDVWPYTMTDSTGESKDVTIPAFMMSAKVGKGFVEFIRAKRDE----------------------SVSADIIVRKDARECVICQVEMSIGMKVTRMPCQHMFHTGCLHEWLQIGNSCPICRVEIAAKR 311
BLAST of NO01G02960 vs. NCBI_GenBank
Match: XP_008905585.1 (hypothetical protein PPTG_11087 [Phytophthora parasitica INRA-310] >ETN09024.1 hypothetical protein PPTG_11087 [Phytophthora parasitica INRA-310]) HSP 1 Score: 107.8 bits (268), Expect = 6.900e-20 Identity = 73/269 (27.14%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAK---IEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + +Q ++ L+ G D G G G R S+E + L + + V + +E G+ + IPG+F P S + ++ ADP P +N + K++V RG TF ++ A+AAGA GV++I +V +WPY M D GE+K I A ++ F+ + E +++ + V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 99 QELQAMVMRLLTEIGNDWNG-GGDTGARRPASDEAVRN--LGSFTADQASTIEVAVVVEGIKGE----VIAIPGNFGPCESLQ-KCSVVIADP-FDGAKPFQNANEMKNKIVVMTRGGCTFAQKVLRAQAAGAAGVIIIQTVDVWPYTMTDSTGESKDVTIPAFMMSAKVGKGFVEFIRAKRDE----------------------SVSADIIVRKDARECVICQVEMSIGMKVTRMPCQHMFHTGCLHEWLQIGNSCPICRVEIAAKR 336
BLAST of NO01G02960 vs. NCBI_GenBank
Match: KUG01539.1 (E3 ubiquitin-protein ligase RING1 [Phytophthora nicotianae]) HSP 1 Score: 107.8 bits (268), Expect = 6.900e-20 Identity = 73/269 (27.14%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAK---IEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + +Q ++ L+ G D G G G R S+E + L + + V + +E G+ + IPG+F P S + ++ ADP P +N + K++V RG TF ++ A+AAGA GV++I +V +WPY M D GE+K I A ++ F+ + E +++ + V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 99 QELQAMVMRLLTEIGNDWNG-GGDTGARRPASDEAVRN--LGSFTADQASTIEVAVVVEGIKGE----VIAIPGNFGPCESLQ-KCSVVIADP-FDGAKPFQNANEMKNKIVVMARGGCTFAQKVLRAQAAGAAGVIIIQTVDVWPYTMTDSTGESKDVTIPAFMMSAKVGKGFVEFIRAKRDE----------------------SVSADIIVRKDARECVICQVEMSIGMKVTRMPCQHMFHTGCLHEWLQIGNSCPICRVEIAAKR 336
BLAST of NO01G02960 vs. NCBI_GenBank
Match: ETO75668.1 (hypothetical protein F444_08797 [Phytophthora parasitica P1976]) HSP 1 Score: 107.5 bits (267), Expect = 9.000e-20 Identity = 73/269 (27.14%), Postives = 120/269 (44.61%), Query Frame = 0 Query: 90 EAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADPLLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAK---IEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEVKPRR 356 + +Q ++ L+ G D G G G R S+E + L + + V + +E G+ + IPG+F P S + ++ ADP P +N + K++V RG TF ++ A+AAGA GV++I +V +WPY M D GE+K I A ++ F+ + E +++ + V REC+IC + R+PCQH +H C +WL + +CP CR+E+ +R Sbjct: 74 QELQAMVMRLLTEIGNDWNG-GGDTGARRPASDEAVRN--LGSFTADQASTIEVAVVVEGIKGE----VIAIPGNFGPCESLK-KCSVVIADP-FDGAKPFQNANEMKNKIVVMARGGCTFAQKVLRAQAAGAAGVIIIQTVDVWPYTMTDSTGESKDVTIPAFMMSAKVGKGFVEFIRAKRDE----------------------SVSADVIVRKDARECVICQVEMSIGMKVTRMPCQHMFHTGCLHEWLQIGNSCPICRVEIAAKR 311
BLAST of NO01G02960 vs. NCBI_GenBank
Match: OQS04405.1 (hypothetical protein THRCLA_03353 [Thraustotheca clavata]) HSP 1 Score: 106.7 bits (265), Expect = 1.500e-19 Identity = 78/278 (28.06%), Postives = 128/278 (46.04%), Query Frame = 0 Query: 80 EGRPDINNLPEAMQQRILELINGHGLDVEGREGGPGERNGLSEEDIAKLPLSQLHTTSSMLMSVNITLESGDGQPPLTMECIPGSFSPIPSKGFQFQLIQADP------LLADVLPLRNKGACQGKVLVTQRGKQTFGAMLVAARAAGALGVVVINSVSLWPYLMRDGKGEAKIEAGKEEGQIADCFIVMVSQAHGEELLRRLASPAPVDTTATTVNAAALTGCLAVTHVERECLICIQAFEESDTILRLPCQHNYHEECARKWLSLRRTCPACRIEV 352 EG DI+ L R+LE G+D +E + SEE +AK LS ++ V + + G+ + +PG+F P S LI A+P L+ DV + K+++ +RG TF + + A+ +GA+ V+++ + +WPY M D G EG + + M+S G+ L+ L++ T NA REC+IC +++D + R+PCQH +H EC +WL + +CP CR+E+ Sbjct: 42 EGINDISTL----MNRLLE---AWGIDPNNQEA----KQPASEEAVAK--LSNFQAGQAITCEVGMVVSGIKGE----VIIVPGNFGPCTSIPLS-DLIVANPFNGANSLINDV---------KNKIVIMERGNCTFASKALRAQESGAIAVIIVQTADVWPYTMTDSTG---------EGNALNIPVFMISSKQGKGLVEYLSTHKAQATIDVRENA-------------RECVICQVDIDKADQVTRMPCQHIFHTECLGQWLKIGNSCPICRVEI 270 The following BLAST results are available for this feature:
BLAST of NO01G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02960 ID=NO01G02960|Name=NO01G02960|organism=Nannochloropsis oceanica|type=gene|length=1190bpback to top protein sequence of NO01G02960.1 >NO01G02960.1-protein ID=NO01G02960.1-protein|Name=NO01G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
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