NO01G02950, NO01G02950 (gene) Nannochloropsis oceanica

Overview
NameNO01G02950
Unique NameNO01G02950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2175
Alignment locationchr1:774547..776721 +

Link to JBrowse

Properties
Property NameValue
DescriptionEpsin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:774547..776721 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008942ENTH_VHS
IPR013809ENTH
Homology
BLAST of NO01G02950 vs. NCBI_GenBank
Match: XP_005854255.1 (c2h2 zinc-finger protein, partial [Nannochloropsis gaditana CCMP526] >EKU22106.1 c2h2 zinc-finger protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 583.6 bits (1503), Expect = 7.600e-163
Identity = 288/348 (82.76%), Postives = 321/348 (92.24%), Query Frame = 0
Query:  202 RGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLE--GVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKLEPVHRFDEE 548
            RG+K GKAL YKP+GYGVAREPLQAR+MRNVFFLTEKVQGMA+KGKK+TRE+KEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT TFHRDED+T+ SNPYRVTLRK+WAKMAE DWRTVAKALYLFHVLLRECEPDDVRIYKKV+AKM REGCKK++ RYFD  AI+AVDV++  GV GA A LDRR FI+RYSKYVLQRAKTFTSKFEEMKVIG+R+I  KDLVGQLGKAEKVL+SGLECAL E EE+ADSEVTLMC ELVARDVYDLFRLFH+KLRWA+DN+A+AFEGADR+EV K+L+RF+ASYA  YP+VQ FL+ TAQLL +YGI+LRTKLEP HRF+EE
Sbjct:  195 RGKK-GKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEE 541          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: EWM29224.1 (Epsin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 581.6 bits (1498), Expect = 2.900e-162
Identity = 288/348 (82.76%), Postives = 320/348 (91.95%), Query Frame = 0
Query:  202 RGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLE--GVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKLEPVHRFDEE 548
            RG+K GKAL YKP+GYGVAREPLQAR+MRNVFFLTEKVQGMA+KGKK+TRE+KEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT TFHRDED+T+ SNPYRVTLRK+WAKMAE DWRTVAKALYLFHVLLRECEPDDVRIYKKV AKM REGCKK++ RYFD  AI+AVDV++  GV GA A LDRR FI+RYSKYVLQRAKTFTSKFEEMKVIG+R+I  KDLVGQLGKAEKVL+SGLECAL E EE+ADSEVTLMC ELVARDVYDLFRLFH+KLRWA+DN+A+AFEGADR+EV K+L+RF+ASYA  YP+VQ FL+ TAQLL +YGI+LRTKLEP HRF+EE
Sbjct:  195 RGKK-GKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEE 541          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: XP_005854254.1 (c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526] >EKU22105.1 c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 304.3 bits (778), Expect = 8.900e-79
Identity = 145/164 (88.41%), Postives = 157/164 (95.73%), Query Frame = 0
Query:  202 RGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYF 366
            RG+K GKAL YKP+GYGVAREPLQAR+MRNVFFLTEKVQGMA+KGKK+TRE+KEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT TFHRDED+T+ SNPYRVTLRK+WAKMAE DWRTVAKALYLFHVLLRECEPDDVRIYKKV+AKM REGCKK++ RYF
Sbjct:   12 RGKK-GKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYF 174          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: CBJ25752.1 (weakly similar Glutamic acid-rich protein precursor [Ectocarpus siliculosus])

HSP 1 Score: 216.9 bits (551), Expect = 1.900e-52
Identity = 125/306 (40.85%), Postives = 183/306 (59.80%), Query Frame = 0
Query:  243 ATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVD--NEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRL-RTKLEPVHRFD 546
            A+  +KL RE+K   SG +ES LLK T PDD  P    + +++DA  TF +D DVT NS  +RV LRK+WAKM+E DWRTV+KA+YLFH +LR+   +   I K   AKM RE  KKT CRYFD      +DVL  V+    A   R+F+ RY  YV +RA+ F ++F+E+  + +R+   +++V  L KA+K +  G+ C   + + E ++E+T++C+   A D++ L+R FH  L W ++   +   F+GAD A V + L+ FK  Y T Y +V  FL    +LL +YG+ +    L   H FD
Sbjct:  244 ASTSQKLKREVKLVVSGSWESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACRYFD------LDVLCRVSEEGEAF--RSFVDRYGTYVFKRAEGFNARFQELDTM-QREEGWENVVTTLAKAQKAIDLGVSC---QPQPEEETELTVLCLRNTALDLHQLWRRFHSSLDWVLEEAEDGDLFDGADSAMVEECLNDFKGFYMTRYDDVLTFLLDAEELLGIYGLHVPDLSLPAAHGFD 537          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: CBN75765.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 117.9 bits (294), Expect = 1.200e-22
Identity = 92/316 (29.11%), Postives = 153/316 (48.42%), Query Frame = 0
Query:  222 EPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT----GTFHRDED---VTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALY 531
            E L+A++      L  K+ G+  KG K+ RE+K   S D E  L+KATRPD+     + +  +L A       +   +D         PY +TL K+W +MAE D+RT +KA+Y+ H L R    +    ++    +M R+  K TK RYF    I+ VD  +G   +E       ++  Y+++VL R ++F+ +  E+  I + +   +     L KA K++ + L C   E   + D++VT   ++LV  D+ +++ LF  KL   +    +   G    E+R+ L  F   Y       Q  +  + +LLALY
Sbjct:  264 ERLKAKLADAQVGLKTKMTGVTHKGAKVMRELKGSISSDLEKTLIKATRPDNDPAKRKHVNLLLQAAEHAFPVYMNPKDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDD-DGRPFSE-------WLDAYAEFVLLRLQSFSPELGELAAI-DAETPHEKASRSLEKAAKLIEAALAC---EIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTG-GGFSSGELRRTLS-FLEFYLEQLSAAQGLVQESHRLLALY 565          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: OEU15634.1 (hypothetical protein FRACYDRAFT_170332, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 110.2 bits (274), Expect = 2.500e-20
Identity = 87/300 (29.00%), Postives = 135/300 (45.00%), Query Frame = 0
Query:  249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD----IIPKDLVG------QLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKL 539
            L RE+K   S + E ++LKATRPDD     +    ++  T        ++   + Y   LRK+WAKMAE DWRT  KALY+ H    +  PD     K    ++ R    K K ++F    + A D          +   RAF+ RY+ YVL RA+ F   F+E+      D      PK +         L  A+ +L +G+ C L  GE    +E T + VE VA D+  L       L  A+ N+A   +GAD   +++  + +        P+ +  +  T   L  +G+ L +++
Sbjct:   29 LFREVKGLTSSELEQVMLKATRPDDTPVKGKHAERLVGVT------YQISGRYDIYDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPDHAPALKARVRELRRTRDPKRKGKFFSSKLLQAGD------DKPESAKFRAFMGRYAHYVLLRAQCFGGMFDEIAAPPSADKKKKAAPKPITSTSLRSDHLDAAKLLLKTGVACVLKNGEA---NENTALAVERVASDLLGLTTAVATALNRALKNDAD-LKGADPVLIKQWCEFYS---EVLLPQTRSMVKQTTPKLDAFGLFLPSRM 309          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: GAX19912.1 (hypothetical protein FisN_1Lh618 [Fistulifera solaris])

HSP 1 Score: 109.8 bits (273), Expect = 3.200e-20
Identity = 89/299 (29.77%), Postives = 141/299 (47.16%), Query Frame = 0
Query:  249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD--IIPKDL------VGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATH-YPEVQHFLSSTAQLLALYGIRLRTKL 539
            L RE+K   S + E ++LKAT+PDD     + +  ++  T       D+      Y   LRK+W KM E DWRT  KA+Y+ H    +  P+     K    ++ R    K K ++F+   + A D           +  RAF+SRYS YVL R + +   F+E+ V+ + D    PK +      V QL  A  +L +GL C L +GEE    E T + VE V  D+  L       L  A+ ++    +GAD A    +L ++ A Y+    P+ +  +  T+  L  +G+ L +++
Sbjct:  217 LYREVKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDI------YDAVLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLLAGDT------TPENVKFRAFLSRYSHYVLLRTQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEE---CENTALAVERVVADMIGLCSAVAVALNRALKDD--DLKGADPA----ILKKWCAFYSKELLPQTKLMVKKTSPKLDAFGLFLPSRM 494          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: GAX28591.1 (hypothetical protein FisN_1Hh618 [Fistulifera solaris])

HSP 1 Score: 109.0 bits (271), Expect = 5.500e-20
Identity = 88/299 (29.43%), Postives = 141/299 (47.16%), Query Frame = 0
Query:  249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD--IIPKDL------VGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATH-YPEVQHFLSSTAQLLALYGIRLRTKL 539
            L RE+K + S + E ++LKAT+PDD     + +  ++  T       D+      Y   LRK+W KM E DWRT  KA+Y+ H    +  P+     K    ++ R    K K ++F+   + A D           +  RAF+SRYS YVL R + +   F+E+ V  + D    PK +      V QL  A  +L +GL C L +GEE    E T + VE V  D+  L       L  A+ ++    +GAD A    +L ++ + Y+    P+ +  +  T+  L  +G+ L +++
Sbjct:  216 LYREVKGFTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDI------YDAVLRKLWGKMVEKDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLLAGDT------TPENVKFRAFLSRYSHYVLLRTQCYGGMFDEIAVPPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEE---CENTALAVERVVADMIGLCSAVAVALNRALKDD--DLKGADPA----ILKKWCSFYSKELLPQTKSMVKKTSPKLDAFGLFLPSRM 493          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: XP_002181259.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47182.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 102.1 bits (253), Expect = 6.700e-18
Identity = 87/296 (29.39%), Postives = 136/296 (45.95%), Query Frame = 0
Query:  251 REMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD--IIPKDLV------GQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKL 539
            RE+K   S + E ++LKATRPDD     + +  ++  T       D+      Y   LRK+W KMAE DWRT  K+LY+ H    +  P+     K    ++ R    K K +YF     N+  +L G +  E  +  RAF+SRY+ YVL RA+ F   F+E+    + D    PK +         L  A  +L +G+ C L E E     E T +  E VA D+  L       L  A+  ++S  +G D   ++K  + +        P+ +  +  T+  L  YG+ L +++
Sbjct:  247 REVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQISPRYDI------YDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELRRTRDPKRKDKYF-----NSKQLLAGESNPE-NIKFRAFMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGVACQLKEDEA---CENTAIAAERVASDLIGLTTSVAIALNRAL--KSSDLKGGDPELLKKWCEFYSEEL---LPQTRAMVKKTSSKLDAYGLFLPSRM 522          
BLAST of NO01G02950 vs. NCBI_GenBank
Match: EJK63810.1 (hypothetical protein THAOC_15514 [Thalassiosira oceanica])

HSP 1 Score: 87.4 bits (215), Expect = 1.700e-13
Identity = 87/318 (27.36%), Postives = 130/318 (40.88%), Query Frame = 0
Query:  249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDD-------VRIYKKVY-AKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVG--------------------QLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKL 539
            L RE+K   S + E ++LK+TRPD+     + +  ++  T       D+      Y   LRK+W KMAE D RT  K++Y+ H    +  P+        +R  +K    K    G +    RYFD   +   D     +G       RAF+SRY+ YVL RA+TF   F E+ +                                  L  A  VL +GL C L +GEE    E T MC+E VA D+  L       +  A+  E    EG D  +   V    +       P+ + F+      L +YG+ L +++
Sbjct:  215 LYREVKGLTSSELEQVMLKSTRPDETPVKTKHVERLVGVTYQISGKYDI------YDAVLRKLWNKMAERDIRTKLKSVYVLHRFSVDGGPEHQEALKQRLRALRKTKDPKRSGGGGRGGSTRYFDSKVLIGPDNDPDNSG------YRAFLSRYAHYVLTRAQTFGGVFNEISLAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEHLKFARMVLKAGLACNLHDGEE---CESTAMCLERVAADLMGL----TSTVATALKRELKGGEG-DACDPELVRSWCEFYSDELLPDTKRFVKRITNKLDVYGLYLPSRM 512          
The following BLAST results are available for this feature:
BLAST of NO01G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
XP_005854255.17.600e-16382.76c2h2 zinc-finger protein, partial [Nannochloropsis... [more]
EWM29224.12.900e-16282.76Epsin-like protein [Nannochloropsis gaditana][more]
XP_005854254.18.900e-7988.41c2h2 zinc-finger protein [Nannochloropsis gaditana... [more]
CBJ25752.11.900e-5240.85weakly similar Glutamic acid-rich protein precurso... [more]
CBN75765.11.200e-2229.11conserved unknown protein [Ectocarpus siliculosus][more]
OEU15634.12.500e-2029.00hypothetical protein FRACYDRAFT_170332, partial [F... [more]
GAX19912.13.200e-2029.77hypothetical protein FisN_1Lh618 [Fistulifera sola... [more]
GAX28591.15.500e-2029.43hypothetical protein FisN_1Hh618 [Fistulifera sola... [more]
XP_002181259.16.700e-1829.39predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK63810.11.700e-1327.36hypothetical protein THAOC_15514 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008031NSK008031Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02950.1NO01G02950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576843gene_294Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100203g3gene1402Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02950.1NO01G02950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02950 ID=NO01G02950|Name=NO01G02950|organism=Nannochloropsis oceanica|type=gene|length=2175bp
ATGGCAGGCCTCGTTCGATACCTGGGACTGGCCCTTGCCCTAGTGCTGCT
TATGCTGCTGAATGATGCCAAGAAGGTGGGGACATCGCGCAGTAGTGGTT
TGTCGGGGCGGGCCAAGTCAGCGGCCAAAGCCAGgtacgcaggagggaat
agatggggcggggtggtcggaatgcgtacggatacttaacaataaggaga
agaccaagcgaccgtggagatggcactccacccgcgcttgcacgtgcggc
agatagtgatacgcttacgcaaaagaagggtgtgcggccctcctctcgtt
ttcgttcgtgaggtcggaagagctttttgatgatgatgagcggcttagac
caccaaccaacgacttaccctccttcttaacacatgtacaatacacagCA
GCAAGAAAGTGAGCAAGTCGCCTGTGTCGTCGACAGGTGCCCGGAGAAGG
CAACCACCAGTGGAGATCTATCGAGAAGAAGACGAAGAGGAGGCGGATGA
CGAGGATGAGGAGGAGGACGTGATGCCTCCCTCTTCGTCCCGCCGAAGCG
GTGGCGGCCGGGCGGCCCCAGATTTTGGCAGGCGCGCGATGCGCGCAGGT
TCAAAGTCCCGGCATAGCTACGTGGAGGAAGAGGAGGAAGACTACGACGA
GGAGGAAGATGAGGACGAGGACTATTTTGACGATGAGGAGGAGGACGAGG
AGGATGGGGAGGAGGAGGATTTGCGGGACCGCCGCCGTTATGGAATCAAG
CCAGGAGGTGTAAAGAAACGCCGTGGTGCCCCGCCTCCACCACCTTCAAA
GAAGGGCAAGGGCAGCAGCAGCAGCCGAAGTAGAAAGAGCTCGCGGGGAG
GGCGGTATGCAGGAGAGAGAGGCAGGAAGGGAGGGAAAGCGTTGACGTAC
AAGCCCGCCGGGTACGGGGTGGCCCGGGAGCCGCTCCAAGCGCGTGTAAT
GCGCAATGTTTTCTTCCTGACTGAGAAGGTACAGGGTATGGCGACGAAGG
GGAAGAAATTGACAAGAGAAATGAAGGAGTATTTTAGTGGGGATTTTGAG
AGCATGCTCTTAAAGGCTACCAGGCCTGATGATGCCCGACCTCCCCCTGA
ATTCATCGGTGCGATCCTAGATGCAACTGGCACCTTTCATCGAGACGAGG
ATGTGACGAGTAATAGCAATCCATACCGTGTTACACTCCGGAAGATCTGG
GCGAAGATGGCGGAAAATGATTGGAGGACTGTCGCCAAGGCCCTTTACTT
GTTTCATGTCTTGCTCCGGGAGTGCGAGCCTGACGATGTGCGGATCTATA
AGAAAGTTTACGCAAAAATGTGTCGGGAAGGGTGTAAGAAGACCAAATGT
CGTTATTTTGACGTGGCGGCGATAAATGCTGTGGATGTTTTGGAGGGAGT
AGCAGGAGCAGAAGCTGCGTTGGATCGACGGGCGTTTATTTCTAGGTATA
GCAAATATGTCTTGCAGCGGGCGAAGACATTCACGTCGAAATTCGAGGAA
ATGAAGGTGATTGGCGAGAGGGACATCATTCCTAAGGATTTGGTCGGGCA
GTTGGGGAAGGCGGAAAAGGTATTGGCATCGGGGTTGGAATGTGCGCTGC
TGGAGGGGGAGGAGGAGGCCGACAGCGAGGTGACGCTGATGTGTGTGGAG
TTGGTCGCAAGGGACGTCTACGATTTATTCAGGCTCTTTCACGACAAGCT
CCGCTGGGCTGTGGATAACGAGGCTTCGGCTTTCGAAGGCGCAGATAGAG
CAGAAGTCCGCAAAGTTCTTGATCGCTTCAAGGCAAGCTACGCGACACAC
TACCCGGAAGTTCAGCATTTTCTCTCGAGCACCGCGCAGCTCTTGGCGTT
ATATGGGATTAGGCTACGCACGAAACTCGAACCTGTCCATCGATTTGATG
AAGAGGACGAGATAGCTGCTGCGGAGGCGGCTGCTCAAGCTGCGGTGGCG
GCGGGGTTTGAGGAAGAGGGGGAGGGAATGATCGAAGCTGGGGTGGCAGG
TGGGGTGGGAGGGCAGGTCGAGGAAGTGGTTGTGGTAGAGGAGGACAAGG
GAGAAGCAAAATCAAACAGTCGAAGTAAGAGGAGAGTGATGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGATGATGAGGAAGATGATGA
GGATGAGGATGAGGATGAGGAGTAG
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protein sequence of NO01G02950.1

>NO01G02950.1-protein ID=NO01G02950.1-protein|Name=NO01G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=637bp
MAGLVRYLGLALALVLLMLLNDAKKVGTSRSSGLSGRAKSAAKASSKKVS
KSPVSSTGARRRQPPVEIYREEDEEEADDEDEEEDVMPPSSSRRSGGGRA
APDFGRRAMRAGSKSRHSYVEEEEEDYDEEEDEDEDYFDDEEEDEEDGEE
EDLRDRRRYGIKPGGVKKRRGAPPPPPSKKGKGSSSSRSRKSSRGGRYAG
ERGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLT
REMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSN
SNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYA
KMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVL
QRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEE
EADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRK
VLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKLEPVHRFDEEDEI
AAAEAAAQAAVAAGFEEEGEGMIEAGVAGGVGGQVEEVVVVEEDKGEAKS
NSRSKRRVMEEEEEEEEEEEEEDDEEDDEDEDEDEE*
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Synonyms
Publications