NO01G02950, NO01G02950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02950 vs. NCBI_GenBank
Match: XP_005854255.1 (c2h2 zinc-finger protein, partial [Nannochloropsis gaditana CCMP526] >EKU22106.1 c2h2 zinc-finger protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 583.6 bits (1503), Expect = 7.600e-163 Identity = 288/348 (82.76%), Postives = 321/348 (92.24%), Query Frame = 0 Query: 202 RGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLE--GVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKLEPVHRFDEE 548 RG+K GKAL YKP+GYGVAREPLQAR+MRNVFFLTEKVQGMA+KGKK+TRE+KEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT TFHRDED+T+ SNPYRVTLRK+WAKMAE DWRTVAKALYLFHVLLRECEPDDVRIYKKV+AKM REGCKK++ RYFD AI+AVDV++ GV GA A LDRR FI+RYSKYVLQRAKTFTSKFEEMKVIG+R+I KDLVGQLGKAEKVL+SGLECAL E EE+ADSEVTLMC ELVARDVYDLFRLFH+KLRWA+DN+A+AFEGADR+EV K+L+RF+ASYA YP+VQ FL+ TAQLL +YGI+LRTKLEP HRF+EE Sbjct: 195 RGKK-GKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEE 541
BLAST of NO01G02950 vs. NCBI_GenBank
Match: EWM29224.1 (Epsin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 581.6 bits (1498), Expect = 2.900e-162 Identity = 288/348 (82.76%), Postives = 320/348 (91.95%), Query Frame = 0 Query: 202 RGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLE--GVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKLEPVHRFDEE 548 RG+K GKAL YKP+GYGVAREPLQAR+MRNVFFLTEKVQGMA+KGKK+TRE+KEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT TFHRDED+T+ SNPYRVTLRK+WAKMAE DWRTVAKALYLFHVLLRECEPDDVRIYKKV AKM REGCKK++ RYFD AI+AVDV++ GV GA A LDRR FI+RYSKYVLQRAKTFTSKFEEMKVIG+R+I KDLVGQLGKAEKVL+SGLECAL E EE+ADSEVTLMC ELVARDVYDLFRLFH+KLRWA+DN+A+AFEGADR+EV K+L+RF+ASYA YP+VQ FL+ TAQLL +YGI+LRTKLEP HRF+EE Sbjct: 195 RGKK-GKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKSRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIDAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLFRLFHEKLRWAIDNQAAAFEGADRSEVAKILERFQASYARLYPQVQQFLTQTAQLLGVYGIKLRTKLEPAHRFEEE 541
BLAST of NO01G02950 vs. NCBI_GenBank
Match: XP_005854254.1 (c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526] >EKU22105.1 c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 304.3 bits (778), Expect = 8.900e-79 Identity = 145/164 (88.41%), Postives = 157/164 (95.73%), Query Frame = 0 Query: 202 RGRKGGKALTYKPAGYGVAREPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYF 366 RG+K GKAL YKP+GYGVAREPLQAR+MRNVFFLTEKVQGMA+KGKK+TRE+KEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT TFHRDED+T+ SNPYRVTLRK+WAKMAE DWRTVAKALYLFHVLLRECEPDDVRIYKKV+AKM REGCKK++ RYF Sbjct: 12 RGKK-GKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTRELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYF 174
BLAST of NO01G02950 vs. NCBI_GenBank
Match: CBJ25752.1 (weakly similar Glutamic acid-rich protein precursor [Ectocarpus siliculosus]) HSP 1 Score: 216.9 bits (551), Expect = 1.900e-52 Identity = 125/306 (40.85%), Postives = 183/306 (59.80%), Query Frame = 0 Query: 243 ATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVD--NEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRL-RTKLEPVHRFD 546 A+ +KL RE+K SG +ES LLK T PDD P + +++DA TF +D DVT NS +RV LRK+WAKM+E DWRTV+KA+YLFH +LR+ + I K AKM RE KKT CRYFD +DVL V+ A R+F+ RY YV +RA+ F ++F+E+ + +R+ +++V L KA+K + G+ C + + E ++E+T++C+ A D++ L+R FH L W ++ + F+GAD A V + L+ FK Y T Y +V FL +LL +YG+ + L H FD Sbjct: 244 ASTSQKLKREVKLVVSGSWESALLKVTWPDDLPPDETLVLSMVDAVKTFKKDRDVTKNSAEHRVLLRKLWAKMSEPDWRTVSKAVYLFHSILRDLPVEHHAILKIFLAKMSREWDKKTACRYFD------LDVLCRVSEEGEAF--RSFVDRYGTYVFKRAEGFNARFQELDTM-QREEGWENVVTTLAKAQKAIDLGVSC---QPQPEEETELTVLCLRNTALDLHQLWRRFHSSLDWVLEEAEDGDLFDGADSAMVEECLNDFKGFYMTRYDDVLTFLLDAEELLGIYGLHVPDLSLPAAHGFD 537
BLAST of NO01G02950 vs. NCBI_GenBank
Match: CBN75765.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 117.9 bits (294), Expect = 1.200e-22 Identity = 92/316 (29.11%), Postives = 153/316 (48.42%), Query Frame = 0 Query: 222 EPLQARVMRNVFFLTEKVQGMATKGKKLTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDAT----GTFHRDED---VTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALY 531 E L+A++ L K+ G+ KG K+ RE+K S D E L+KATRPD+ + + +L A + +D PY +TL K+W +MAE D+RT +KA+Y+ H L R + ++ +M R+ K TK RYF I+ VD +G +E ++ Y+++VL R ++F+ + E+ I + + + L KA K++ + L C E + D++VT ++LV D+ +++ LF KL + + G E+R+ L F Y Q + + +LLALY Sbjct: 264 ERLKAKLADAQVGLKTKMTGVTHKGAKVMRELKGSISSDLEKTLIKATRPDNDPAKRKHVNLLLQAAEHAFPVYMNPKDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDD-DGRPFSE-------WLDAYAEFVLLRLQSFSPELGELAAI-DAETPHEKASRSLEKAAKLIEAALAC---EIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTG-GGFSSGELRRTLS-FLEFYLEQLSAAQGLVQESHRLLALY 565
BLAST of NO01G02950 vs. NCBI_GenBank
Match: OEU15634.1 (hypothetical protein FRACYDRAFT_170332, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 110.2 bits (274), Expect = 2.500e-20 Identity = 87/300 (29.00%), Postives = 135/300 (45.00%), Query Frame = 0 Query: 249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD----IIPKDLVG------QLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKL 539 L RE+K S + E ++LKATRPDD + ++ T ++ + Y LRK+WAKMAE DWRT KALY+ H + PD K ++ R K K ++F + A D + RAF+ RY+ YVL RA+ F F+E+ D PK + L A+ +L +G+ C L GE +E T + VE VA D+ L L A+ N+A +GAD +++ + + P+ + + T L +G+ L +++ Sbjct: 29 LFREVKGLTSSELEQVMLKATRPDDTPVKGKHAERLVGVT------YQISGRYDIYDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPDHAPALKARVRELRRTRDPKRKGKFFSSKLLQAGD------DKPESAKFRAFMGRYAHYVLLRAQCFGGMFDEIAAPPSADKKKKAAPKPITSTSLRSDHLDAAKLLLKTGVACVLKNGEA---NENTALAVERVASDLLGLTTAVATALNRALKNDAD-LKGADPVLIKQWCEFYS---EVLLPQTRSMVKQTTPKLDAFGLFLPSRM 309
BLAST of NO01G02950 vs. NCBI_GenBank
Match: GAX19912.1 (hypothetical protein FisN_1Lh618 [Fistulifera solaris]) HSP 1 Score: 109.8 bits (273), Expect = 3.200e-20 Identity = 89/299 (29.77%), Postives = 141/299 (47.16%), Query Frame = 0 Query: 249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD--IIPKDL------VGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATH-YPEVQHFLSSTAQLLALYGIRLRTKL 539 L RE+K S + E ++LKAT+PDD + + ++ T D+ Y LRK+W KM E DWRT KA+Y+ H + P+ K ++ R K K ++F+ + A D + RAF+SRYS YVL R + + F+E+ V+ + D PK + V QL A +L +GL C L +GEE E T + VE V D+ L L A+ ++ +GAD A +L ++ A Y+ P+ + + T+ L +G+ L +++ Sbjct: 217 LYREVKGLTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDI------YDAVLRKLWGKMVERDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLLAGDT------TPENVKFRAFLSRYSHYVLLRTQCYGGMFDEIAVLPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEE---CENTALAVERVVADMIGLCSAVAVALNRALKDD--DLKGADPA----ILKKWCAFYSKELLPQTKLMVKKTSPKLDAFGLFLPSRM 494
BLAST of NO01G02950 vs. NCBI_GenBank
Match: GAX28591.1 (hypothetical protein FisN_1Hh618 [Fistulifera solaris]) HSP 1 Score: 109.0 bits (271), Expect = 5.500e-20 Identity = 88/299 (29.43%), Postives = 141/299 (47.16%), Query Frame = 0 Query: 249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD--IIPKDL------VGQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATH-YPEVQHFLSSTAQLLALYGIRLRTKL 539 L RE+K + S + E ++LKAT+PDD + + ++ T D+ Y LRK+W KM E DWRT KA+Y+ H + P+ K ++ R K K ++F+ + A D + RAF+SRYS YVL R + + F+E+ V + D PK + V QL A +L +GL C L +GEE E T + VE V D+ L L A+ ++ +GAD A +L ++ + Y+ P+ + + T+ L +G+ L +++ Sbjct: 216 LYREVKGFTSSELEQVMLKATKPDDTPVKGKHVERLVGVTYQIGPKFDI------YDAVLRKLWGKMVEKDWRTTMKAVYIMHRFSADGAPEHAAALKARLRELRRTRDPKRKDKFFNTKQLLAGDT------TPENVKFRAFLSRYSHYVLLRTQCYGGMFDEIAVPPKSDKKKAPKPITSTCLRVEQLESAAVLLKAGLACQLKDGEE---CENTALAVERVVADMIGLCSAVAVALNRALKDD--DLKGADPA----ILKKWCSFYSKELLPQTKSMVKKTSPKLDAFGLFLPSRM 493
BLAST of NO01G02950 vs. NCBI_GenBank
Match: XP_002181259.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47182.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 102.1 bits (253), Expect = 6.700e-18 Identity = 87/296 (29.39%), Postives = 136/296 (45.95%), Query Frame = 0 Query: 251 REMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDDVRIYKKVYAKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERD--IIPKDLV------GQLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKL 539 RE+K S + E ++LKATRPDD + + ++ T D+ Y LRK+W KMAE DWRT K+LY+ H + P+ K ++ R K K +YF N+ +L G + E + RAF+SRY+ YVL RA+ F F+E+ + D PK + L A +L +G+ C L E E E T + E VA D+ L L A+ ++S +G D ++K + + P+ + + T+ L YG+ L +++ Sbjct: 247 REVKGLTSSELEQVMLKATRPDDTPVKGKHVERLVGVTYQISPRYDI------YDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELRRTRDPKRKDKYF-----NSKQLLAGESNPE-NIKFRAFMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGVACQLKEDEA---CENTAIAAERVASDLIGLTTSVAIALNRAL--KSSDLKGGDPELLKKWCEFYSEEL---LPQTRAMVKKTSSKLDAYGLFLPSRM 522
BLAST of NO01G02950 vs. NCBI_GenBank
Match: EJK63810.1 (hypothetical protein THAOC_15514 [Thalassiosira oceanica]) HSP 1 Score: 87.4 bits (215), Expect = 1.700e-13 Identity = 87/318 (27.36%), Postives = 130/318 (40.88%), Query Frame = 0 Query: 249 LTREMKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATGTFHRDEDVTSNSNPYRVTLRKIWAKMAENDWRTVAKALYLFHVLLRECEPDD-------VRIYKKVY-AKMCREGCKKTKCRYFDVAAINAVDVLEGVAGAEAALDRRAFISRYSKYVLQRAKTFTSKFEEMKVIGERDIIPKDLVG--------------------QLGKAEKVLASGLECALLEGEEEADSEVTLMCVELVARDVYDLFRLFHDKLRWAVDNEASAFEGADRAEVRKVLDRFKASYATHYPEVQHFLSSTAQLLALYGIRLRTKL 539 L RE+K S + E ++LK+TRPD+ + + ++ T D+ Y LRK+W KMAE D RT K++Y+ H + P+ +R +K K G + RYFD + D +G RAF+SRY+ YVL RA+TF F E+ + L A VL +GL C L +GEE E T MC+E VA D+ L + A+ E EG D + V + P+ + F+ L +YG+ L +++ Sbjct: 215 LYREVKGLTSSELEQVMLKSTRPDETPVKTKHVERLVGVTYQISGKYDI------YDAVLRKLWNKMAERDIRTKLKSVYVLHRFSVDGGPEHQEALKQRLRALRKTKDPKRSGGGGRGGSTRYFDSKVLIGPDNDPDNSG------YRAFLSRYAHYVLTRAQTFGGVFNEISLAQSXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEHLKFARMVLKAGLACNLHDGEE---CESTAMCLERVAADLMGL----TSTVATALKRELKGGEG-DACDPELVRSWCEFYSDELLPDTKRFVKRITNKLDVYGLYLPSRM 512 The following BLAST results are available for this feature:
BLAST of NO01G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02950 ID=NO01G02950|Name=NO01G02950|organism=Nannochloropsis oceanica|type=gene|length=2175bpback to top protein sequence of NO01G02950.1 >NO01G02950.1-protein ID=NO01G02950.1-protein|Name=NO01G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=637bpback to top Synonyms
Publications
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