NO01G02880, NO01G02880 (gene) Nannochloropsis oceanica

Overview
NameNO01G02880
Unique NameNO01G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2463
Alignment locationchr1:748111..750573 +

Link to JBrowse

Properties
Property NameValue
DescriptionTranscription factor 25
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:748111..750573 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006994TCF25
Homology
BLAST of NO01G02880 vs. NCBI_GenBank
Match: XP_024574988.1 (Uncharacterized conserved protein [Plasmopara halstedii] >CEG38619.1 Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 228.4 bits (581), Expect = 6.900e-56
Identity = 146/441 (33.11%), Postives = 223/441 (50.57%), Query Frame = 0
Query:  196 QLYQRRCFFGAPKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDP 637
            +L  ++    +P ++WPRPPT+VGGGIR  R   P        +   +Y   WS A++ LQ ++EL+Q T DPN +A FL  HP+H + LLT++  +  HGQMD++ D ++RC++++E A+ + F                G     NCRMD++   N  FF ALF H++ +G RG  ++AFE AK LL+LDP GDP  + L +DYYAL + + Q ++ + ++  P+         +    +  S+K A  D  +              +V ALPN+ FS ALA F+   + + ++AKT L  ALL++P +LKPL+EK   ++ S     W  +L    FAN       + VL  L+ +YV R++ +W  ++    FL   A   L          ++ +     H         KY     ADY DE   LPAD   L P
Sbjct:  167 RLIAKKVMMVSPLDEWPRPPTFVGGGIRWTRSNKPKGI--GWNSLCHYYEVTWSIAYRKLQDEFELLQRTHDPNLIAHFLQRHPYHIDALLTMSEFFQHHGQMDQATDCIKRCIYVFELAWTDQF------------DVCKG-----NCRMDIQTKNNDGFFRALFMHMKQIGRRGCMRSAFETAKLLLSLDPHGDPMNVLLAIDYYALTSRQYQFVIDLSDSKLPV---VDRIACETTMLRKKSNKAAPLDTSD--------------SVLALPNLEFSLALAQFF---LGNESEAKTKLATALLKYPAVLKPLLEKIAVDVSS---SQWQPILSSCAFANVCNVGEEQSVLQHLLDIYVTRNHSIWKANN-VQSFLLQSAQYALASPAFVSAIAQVLKLPACLH---------KYARAVKADYSDEVTTLPADHPMLQP 555          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: POM76342.1 (Hypothetical protein PHPALM_6428 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 226.5 bits (576), Expect = 2.600e-55
Identity = 167/508 (32.87%), Postives = 246/508 (48.43%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRSSG 708
            R+    +P ++WPRPPT+VGGGIR  R   P         N  ++   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  F+ ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ +  +  P+                 +D+ + SD       +  SAG SD TV+ LPN+ FS ALA F+   + + ++AK  L  ALL+FP +LK L+EK      S     W  +L    FANA        VL  L+ +YV R++ +W   ++A  FL   A   L      P       + +        + L KY     ADY DE   LPAD     P L  P +     L         L      Q +               D N PL  LF ++LLPWN ++ +G
Sbjct:  527 RKVMMVSPLDEWPRPPTFVGGGIRWTRSNKPKGAGWNSLCN--YFEITWSMAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDNATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNAGFYKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLVASKTPV-----------------ADRFSHSDTRPN-KAIKTSAGTSD-TVADLPNLQFSLALAHFF---LGNESEAKDLLAAALLKFPTMLKSLLEKIAANPSS---SSWKPILSSRVFANARNLDGEHNVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAQHAL----ASPALVSANPQVLEL-----PSCLQKYIRAVTADYSDEITTLPAD----HPMLQPPQLQNGQPL-----DAEALAALARAQAEFEAGNLP-------ADAN-PLL-LFLQTLLPWNHVQGAG 962          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: GAX95985.1 (Hypothetical protein PINS_003892 [Pythium insidiosum])

HSP 1 Score: 211.8 bits (538), Expect = 6.700e-51
Identity = 145/444 (32.66%), Postives = 215/444 (48.42%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYG----FE--WSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPA 638
            ++ +  +P +DWPRPPT+V GGIR  R   P           SW G    FE  WS A++  Q++++++Q+T DPN ++ FL  +P H + LL ++ ++  HGQMD + D ++RC+++ E A+ + F                G     NCRMDV    N  FF ALF   + +G RG  ++AFE AK LL LDP+GDP  + L +DYYA+ A +   ++A+ ++         E  D  E+       + G            SA   D  +SALPNV FS ALA ++   + +  +A   L  +LLRFP LL PL++K      ++ +  W  VL    FANA   L     L  ++ +YV R++ +W   +E   FL  GA   +          ++ E   S         L KY+     DY DE   LP D   L PA
Sbjct:  432 KKVYMVSPHDDWPRPPTFVAGGIRWTRANKP--------EGPSWNGLCQYFEITWSMAYKKAQEEFQILQQTHDPNLISHFLHRYPFHIDALLQMSEVFQHHGQMDHASDCIKRCMYVLELAWADQF------------DVTKG-----NCRMDVNTEHNDGFFKALFLLTKQVGRRGCMRSAFETAKLLLGLDPQGDPMNVLLAIDYYAISARQYDFVVALADSKL-------EAVDRFEQSDKSKSTKRGK-----------SASSDDDNISALPNVQFSLALAKYF---LGNEQEATEILARSLLRFPTLLTPLLDKI---AVNKSSATWQAVLGCRIFANAHT-LDENSALKHVLDIYVSRNHTIWK-VNEVQXFLLRGAQLAVSSTMLASTHSQVTELPPS---------LLKYKRSYPGDYSDEITTLPPDHPMLQPA 815          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: XP_012199200.1 (hypothetical protein SPRG_05208 [Saprolegnia parasitica CBS 223.65] >KDO30018.1 hypothetical protein SPRG_05208 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 204.1 bits (518), Expect = 1.400e-48
Identity = 156/509 (30.65%), Postives = 238/509 (46.76%), Query Frame = 0
Query:  207 PKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPAD---LNP----LDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAE----LFWRSLLPWNTIR 705
            P + WPRPPT+VGGGIR  R++ PA      +    ++  +WS  ++ +Q+ ++++Q T DPNA+  FLA HP+H + LL ++ ++  HGQMD S D +++C++  E A+ E +  A     GTA             RMD+   +N  +F ALF  ++ +G RG  ++AFE+AK + ++DP+GDP  + LCLDYYAL A + Q +L +  +   +                    R GS A   +     SA     TV ALP + FS ALA++    + + A A  AL  AL ++P +LKPL +K      S  ++ W  VL    FAN+   L     L  ++ +YV R + LW    +   FL   A      + R        +           +PL KY      DY D+   LPAD   L P    +DP   DPA+     L   +     +   Q   Q+           +  +  NLP       LF ++ LPWN ++
Sbjct:  179 PDDTWPRPPTFVGGGIRWTRVDKPA--CPSWDLGCDYFQVDWSLTYKKMQEQFQVLQSTHDPNAIGHFLAKHPYHVDALLQMSEVFQHHGQMDHSADCIKKCVYFLELAWGEQYDVA----NGTA-------------RMDIHAGDNAAYFRALFFLMKQVGRRGCVRSAFEIAKLIWSMDPKGDPMHVLLCLDYYALAARQCQFVLDLYASHTEV------------------VVRTGSAA---VPTQPASA-----TVDALPGLQFSAALAMYH---LGNEADATDALARALAKYPRVLKPLTDKCGI---STTSKAWQDVLCSAVFANS-PHLDDNGGLAHVLDIYVLRHHSLWK-VQDVQSFLLTSAARASSSYNRATFERDWPKS----------SPLQKYYRAITPDYSDDVTTLPADHPMLQPPQMAVDPNGLDPAL-----LEELQNNPMAMAQLQQQLQE----------EQARVGGNLPADANPLLLFLQTFLPWNRVQ 609          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: XP_008610726.1 (hypothetical protein SDRG_06706 [Saprolegnia diclina VS20] >EQC35964.1 hypothetical protein SDRG_06706 [Saprolegnia diclina VS20])

HSP 1 Score: 202.6 bits (514), Expect = 4.100e-48
Identity = 155/509 (30.45%), Postives = 236/509 (46.37%), Query Frame = 0
Query:  207 PKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPAD---LNP----LDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAE----LFWRSLLPWNTIR 705
            P + WPRPPT+VGGGIR  R++ PA      +    ++  +WS  ++ +Q+ ++++Q T DPNA+  FLA HP+H + LL ++ ++  HGQMD S D +++C++  E A+ E +  A     GTA             RMD+   +N  +F ALF  ++ +G RG  ++AFE+AK + ++DP+GDP  + LCLDYYAL A + Q +L +  +   +                    R GS A       +        TV ALP + FS ALAL+    + + A A  AL  AL ++P +LKPL +K      S  ++ W  VL    FAN+   L     L  ++ +YV R + LW    +   FL   A      + R        +           +PL KY      DY D+   LPAD   L P    +DP   DPA+     L   +     +   Q   Q+           +  +  NLP       LF ++ LPWN ++
Sbjct:  178 PDDSWPRPPTFVGGGIRWTRVDKPA--CPSWDLGCDYFQVDWSLTYKKMQEQFQVLQSTHDPNAIGHFLAKHPYHVDALLQMSEVFQHHGQMDHSADCIKKCVYFLELAWGEQYDVA----NGTA-------------RMDIHAGDNAAYFRALFFLMKQVGRRGCVRSAFEIAKLIWSMDPKGDPMHVLLCLDYYALAARQCQFVLDLYASHTEV------------------VVRHGSAAVPTHPASA--------TVDALPGLQFSAALALYH---LGNEADATDALAIALAKYPRVLKPLTDKCGI---STTSKAWQDVLCSAVFANS-PHLDDNGGLAHVLDIYVLRHHSLWK-VQDVQTFLLASAARASSSYNRATFERDWPQS----------SPLQKYYRAITPDYSDDVTTLPADHPMLQPPQMAMDPNGLDPAL-----LEELQNNPMAMAQLQQQLQE----------EQARVGGNLPADANPLLLFLQTFLPWNRVQ 608          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: CCI46607.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 150/508 (29.53%), Postives = 238/508 (46.85%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAP-AEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGF-PIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRS 706
            R+     P + WPRPP ++GGGIR  R   P  E+  E   ++ +Y   WS  ++   + ++ VQ + DP ALA FL  +P+H + L+ ++ +Y  HGQMD + D ++RC+++ E ++ E+F               S G    N RMD R   N  F+ ALF ++Q  G RG  ++AFE+A+ + ALDP GDP  + L LDYYAL + +   +LA+ +A   P+ R  +  R +VE                              ++S+LPN+  S ALA+F S     + +A+  L +ALL +P +L  L++  +    S   + W  V+ +  FA+A   L  + VL  ++++YV R   LW  ++    FL+  A   +     +    ++ E   S         L KY   A+ DY DE   LP D    DP      + +  ++ +         GFQ     L G+               PL  LF +SLLPWN +++
Sbjct:  275 RKALMVTPSDTWPRPPPFIGGGIRWARCPRPDGEFWAE---SSDYYQIVWSSEYEKSSKAFQFVQTSHDPQALAEFLYRNPYHLDALIQMSRVYQHHGQMDHATDCIKRCMYVCELSWSENF-------------DVSNG----NSRMDYRIETNATFYKALFMYMQQAGRRGCMRSAFELARMIFALDPHGDPVSVVLALDYYALASRQYAFILALLDANIQPVDRFTESARSEVE----------------------------SHSLSSLPNLYLSSALAMFHSG----KKEAQEQLAKALLMYPSVLSLLLDACKVRTTS---EAWKSVVENSRFADARP-LSGDSVLAHVLSIYVTRHSQLWKSEN-VSDFLYQSAKLAIDSSVLKSAYPQMMELPPS---------LLKYHRAALQDYTDEVTMLPED----DP--IPQQMEQMNQMAVHLPLENIQNGFQDDALSLTGN---------------PLL-LFLQSLLPWNVVQT 694          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: CCI46608.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 150/508 (29.53%), Postives = 238/508 (46.85%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAP-AEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGF-PIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRS 706
            R+     P + WPRPP ++GGGIR  R   P  E+  E   ++ +Y   WS  ++   + ++ VQ + DP ALA FL  +P+H + L+ ++ +Y  HGQMD + D ++RC+++ E ++ E+F               S G    N RMD R   N  F+ ALF ++Q  G RG  ++AFE+A+ + ALDP GDP  + L LDYYAL + +   +LA+ +A   P+ R  +  R +VE                              ++S+LPN+  S ALA+F S     + +A+  L +ALL +P +L  L++  +    S   + W  V+ +  FA+A   L  + VL  ++++YV R   LW  ++    FL+  A   +     +    ++ E   S         L KY   A+ DY DE   LP D    DP      + +  ++ +         GFQ     L G+               PL  LF +SLLPWN +++
Sbjct:  182 RKALMVTPSDTWPRPPPFIGGGIRWARCPRPDGEFWAE---SSDYYQIVWSSEYEKSSKAFQFVQTSHDPQALAEFLYRNPYHLDALIQMSRVYQHHGQMDHATDCIKRCMYVCELSWSENF-------------DVSNG----NSRMDYRIETNATFYKALFMYMQQAGRRGCMRSAFELARMIFALDPHGDPVSVVLALDYYALASRQYAFILALLDANIQPVDRFTESARSEVE----------------------------SHSLSSLPNLYLSSALAMFHSG----KKEAQEQLAKALLMYPSVLSLLLDACKVRTTS---EAWKSVVENSRFADARP-LSGDSVLAHVLSIYVTRHSQLWKSEN-VSDFLYQSAKLAIDSSVLKSAYPQMMELPPS---------LLKYHRAALQDYTDEVTMLPED----DP--IPQQMEQMNQMAVHLPLENIQNGFQDDALSLTGN---------------PLL-LFLQSLLPWNVVQT 601          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: CCI46609.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 150/508 (29.53%), Postives = 238/508 (46.85%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAP-AEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGF-PIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRS 706
            R+     P + WPRPP ++GGGIR  R   P  E+  E   ++ +Y   WS  ++   + ++ VQ + DP ALA FL  +P+H + L+ ++ +Y  HGQMD + D ++RC+++ E ++ E+F               S G    N RMD R   N  F+ ALF ++Q  G RG  ++AFE+A+ + ALDP GDP  + L LDYYAL + +   +LA+ +A   P+ R  +  R +VE                              ++S+LPN+  S ALA+F S     + +A+  L +ALL +P +L  L++  +    S   + W  V+ +  FA+A   L  + VL  ++++YV R   LW  ++    FL+  A   +     +    ++ E   S         L KY   A+ DY DE   LP D    DP      + +  ++ +         GFQ     L G+               PL  LF +SLLPWN +++
Sbjct:  273 RKALMVTPSDTWPRPPPFIGGGIRWARCPRPDGEFWAE---SSDYYQIVWSSEYEKSSKAFQFVQTSHDPQALAEFLYRNPYHLDALIQMSRVYQHHGQMDHATDCIKRCMYVCELSWSENF-------------DVSNG----NSRMDYRIETNATFYKALFMYMQQAGRRGCMRSAFELARMIFALDPHGDPVSVVLALDYYALASRQYAFILALLDANIQPVDRFTESARSEVE----------------------------SHSLSSLPNLYLSSALAMFHSG----KKEAQEQLAKALLMYPSVLSLLLDACKVRTTS---EAWKSVVENSRFADARP-LSGDSVLAHVLSIYVTRHSQLWKSEN-VSDFLYQSAKLAIDSSVLKSAYPQMMELPPS---------LLKYHRAALQDYTDEVTMLPED----DP--IPQQMEQMNQMAVHLPLENIQNGFQDDALSLTGN---------------PLL-LFLQSLLPWNVVQT 692          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: CCI46610.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 150/508 (29.53%), Postives = 238/508 (46.85%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAP-AEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGF-PIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRS 706
            R+     P + WPRPP ++GGGIR  R   P  E+  E   ++ +Y   WS  ++   + ++ VQ + DP ALA FL  +P+H + L+ ++ +Y  HGQMD + D ++RC+++ E ++ E+F               S G    N RMD R   N  F+ ALF ++Q  G RG  ++AFE+A+ + ALDP GDP  + L LDYYAL + +   +LA+ +A   P+ R  +  R +VE                              ++S+LPN+  S ALA+F S     + +A+  L +ALL +P +L  L++  +    S   + W  V+ +  FA+A   L  + VL  ++++YV R   LW  ++    FL+  A   +     +    ++ E   S         L KY   A+ DY DE   LP D    DP      + +  ++ +         GFQ     L G+               PL  LF +SLLPWN +++
Sbjct:  180 RKALMVTPSDTWPRPPPFIGGGIRWARCPRPDGEFWAE---SSDYYQIVWSSEYEKSSKAFQFVQTSHDPQALAEFLYRNPYHLDALIQMSRVYQHHGQMDHATDCIKRCMYVCELSWSENF-------------DVSNG----NSRMDYRIETNATFYKALFMYMQQAGRRGCMRSAFELARMIFALDPHGDPVSVVLALDYYALASRQYAFILALLDANIQPVDRFTESARSEVE----------------------------SHSLSSLPNLYLSSALAMFHSG----KKEAQEQLAKALLMYPSVLSLLLDACKVRTTS---EAWKSVVENSRFADARP-LSGDSVLAHVLSIYVTRHSQLWKSEN-VSDFLYQSAKLAIDSSVLKSAYPQMMELPPS---------LLKYHRAALQDYTDEVTMLPED----DP--IPQQMEQMNQMAVHLPLENIQNGFQDDALSLTGN---------------PLL-LFLQSLLPWNVVQT 599          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: CCI46611.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 150/508 (29.53%), Postives = 238/508 (46.85%), Query Frame = 0
Query:  200 RRCFFGAPKEDWPRPPTYVGGGIRMVRLEAP-AEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGF-PIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRS 706
            R+     P + WPRPP ++GGGIR  R   P  E+  E   ++ +Y   WS  ++   + ++ VQ + DP ALA FL  +P+H + L+ ++ +Y  HGQMD + D ++RC+++ E ++ E+F               S G    N RMD R   N  F+ ALF ++Q  G RG  ++AFE+A+ + ALDP GDP  + L LDYYAL + +   +LA+ +A   P+ R  +  R +VE                              ++S+LPN+  S ALA+F S     + +A+  L +ALL +P +L  L++  +    S   + W  V+ +  FA+A   L  + VL  ++++YV R   LW  ++    FL+  A   +     +    ++ E   S         L KY   A+ DY DE   LP D    DP      + +  ++ +         GFQ     L G+               PL  LF +SLLPWN +++
Sbjct:  201 RKALMVTPSDTWPRPPPFIGGGIRWARCPRPDGEFWAE---SSDYYQIVWSSEYEKSSKAFQFVQTSHDPQALAEFLYRNPYHLDALIQMSRVYQHHGQMDHATDCIKRCMYVCELSWSENF-------------DVSNG----NSRMDYRIETNATFYKALFMYMQQAGRRGCMRSAFELARMIFALDPHGDPVSVVLALDYYALASRQYAFILALLDANIQPVDRFTESARSEVE----------------------------SHSLSSLPNLYLSSALAMFHSG----KKEAQEQLAKALLMYPSVLSLLLDACKVRTTS---EAWKSVVENSRFADARP-LSGDSVLAHVLSIYVTRHSQLWKSEN-VSDFLYQSAKLAIDSSVLKSAYPQMMELPPS---------LLKYHRAALQDYTDEVTMLPED----DP--IPQQMEQMNQMAVHLPLENIQNGFQDDALSLTGN---------------PLL-LFLQSLLPWNVVQT 620          
The following BLAST results are available for this feature:
BLAST of NO01G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024574988.16.900e-5633.11Uncharacterized conserved protein [Plasmopara hals... [more]
POM76342.12.600e-5532.87Hypothetical protein PHPALM_6428 [Phytophthora pal... [more]
GAX95985.16.700e-5132.66Hypothetical protein PINS_003892 [Pythium insidios... [more]
XP_012199200.11.400e-4830.65hypothetical protein SPRG_05208 [Saprolegnia paras... [more]
XP_008610726.14.100e-4830.45hypothetical protein SDRG_06706 [Saprolegnia dicli... [more]
CCI46607.11.200e-4729.53unnamed protein product [Albugo candida][more]
CCI46608.11.200e-4729.53unnamed protein product [Albugo candida][more]
CCI46609.11.200e-4729.53unnamed protein product [Albugo candida][more]
CCI46610.11.200e-4729.53unnamed protein product [Albugo candida][more]
CCI46611.11.200e-4729.53unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008040NSK008040Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02880.1NO01G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|235440gene_284Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g123gene1408Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02880.1NO01G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02880 ID=NO01G02880|Name=NO01G02880|organism=Nannochloropsis oceanica|type=gene|length=2463bp
ATGAGCGCGCGGCATCTTCAAGCGTTAAGAGCGCCAGGGCTGGGCTCACA
GGCTGCGAAGGACCAAGAGCTGGAGGAGGAGGAATCATCAGAGGAGGAGG
AGGTCGCAGCTCGCGGCGGGTTCCATTTGCTGCTCGATAGTAGCGACGAG
GAGGAGAAGGAGCAGGAGGATGTGGACGCGCAGGTATGGGAAGATGGTGG
AGCGGACGACAAAGAGGAAGGGCAGGAGGGGAGGAAGCCGGAGCTGCAGC
CCGTGCTTGCACGAAAGGCTAAGAAAGTAGCTGTGGTGGAAGACGACGAG
GAAGCCTGGCTGGAAATACAGAGACAGGCAGTGGGAGGAGGAGAGGGAGG
AGATATGACAGCAAGGAGCAGCCCCATTATTCAAAATCCTGTGAGTACAT
CGGCTGATGCCCTGGACATTGATATCAAGTCCCTCAGTTTGGACAAGGAG
CTCAAATTGCGCTTCGGGGACGAAGGCGTTGGAGACGGAGGCGGCGGCGG
AGGAGGAGGTGGTGGAAGAGCCAGTCGACGGCGCGGCGGTGCGCTTGGAC
GTGGAAGTACTAGTATGGGTGGAAGCGTTTTGGGCCAGCTGTATCAGCGG
CGTTGCTTTTTTGGCGCACCGAAGGAAGACTGGCCCAGACCTCCGACTTA
TGTGGGAGGGGGCATTCGGATGGTTCGGTTGGAGGCACCGGCGGAATACG
AGAACGAGGAAGAGGCTAATGCTTCCTGGTATGGCTTTGAATGGTCCCCG
GCGTTTCAGGCACTGCAGCAAGATTATGAGCTCGTCCAAGAAACCTGCGA
CCCTAACGCGCTTGCCGTCTTTTTGGCGCATCACCCTCACCATGCGGAGG
GCCTTCTCACGCTTGCATTGATCTATGCCACACATGgtacgtgagattga
tgtcggatcggtccataaattcatctagaggatcacaccttagcatttgt
cttcgcaggggcataagtcgcctgaccagattgctcacgccactcttctt
taccacatccttccacacacgtattccgctctttactcccaacagGACAA
ATGGATCGATCTCACGACTATGTGCGACGCTGCCTTTTTATTTATGAGGC
CGCTTATATTGAATCCTTTCGCGCCGCTTTCACCTATTCTCTCGGCACCG
CCACTGGAGCTGCGAGTGGAGGACCCGGGACGATTAACTGCAGGATGGAC
GTTCGGCGACCGGAGAATCGCCCCTTCTTCATGGCGCTCTTTCGGCACGT
GCAGATGCTTGGAGGGCGCGGACTGTATCAGACCGCCTTCGAAGTGGCCA
AGTTTCTGCTCGCACTCGATCCCAGGGGAGATCCAACGGGCATCTGGTTG
TGCCTGGACTACTATGCGCTTCGAGCAGGCAAAAGACAGCAGTTGTTGGC
TATGCAAGAAGCGGGTTTCCCCATCGGTCGGGGATGGAAGGAGCCTAGAG
ATGATGTTGAGGAGTGGCAAGATGGGAGCGACAAGAGAGCAGGCAGTGAT
GCCGACGAGGAGCTCGACGGCATGTCTGACTCTGCCGGTTTCTCAGACTG
GACGGTGTCGGCCTTGCCTAATGTGTGCTTCTCTTGCGCGCTGGCTCTCT
TTTGGAGCAACTTGGTCGAGGATCGGGCTAAAGCCAAGACTGCGCTACGC
GAAGCTCTCCTGCGTTTTCCTGTCCTGCTCAAGCCCCTGATTGAGAAGAG
TCGAAACGAGTTGGGCTCCCGCATCACCCAGCCATGgtgagtaatttaat
gcttgttggacagagaagagcggcaacaattacagacagagaagagcgac
aaaaattataacttgtttgtttaaatttaaatccaaaatttatttcctca
cgtattcttcttgcacacatttgcctcgttgtacctttaccacacatgac
gaatatacagGGACGGCGTCTTGCGACACCCCTTCTTTGCCAATGCGGAG
GCGCGTTTGCCGCTGGAATGCGTGCTTTTGCGCTTGGTGGCTGTCTACGT
GCAACGAAGCTATGATCTTTGGGCCGGCGACTCGGAGGCTATGCAATTTT
TGTTCGATGGAGCCTGGGCCGTGCTGATTGAGTTTGAGCGGGAGCCAGGA
GCGCACAAGCTGGAGGAGGAAGAGGTGTCTCGGCACTACGGCTACGGTCA
CAATCCTTTGGACAAGTATCGCGGAGTCGCCGTCGCGGACTATGGTGACG
AGTGGCCTCGATTACCTGCCGACCTCAACCCTCTCGACCCGGCCTTGGCG
GATCCAGCTGTTGCCAGGCGTGGCCGATTGCGTCTTCGCCGAGGAGGGGG
AAGAGGGTTGGGCGGTTTCCAGCATCCTCAGCAGCAATTGTGGGGCGACG
GCGATGGCATGGGGCGAGGGCGCAACTATCTTGATCCAAATCTGCCTCTG
GCGGAGTTGTTTTGGCGGAGCCTTTTGCCGTGGAACACCATTAGGAGCAG
TGGGTATGGATGA
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protein sequence of NO01G02880.1

>NO01G02880.1-protein ID=NO01G02880.1-protein|Name=NO01G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=710bp
MSARHLQALRAPGLGSQAAKDQELEEEESSEEEEVAARGGFHLLLDSSDE
EEKEQEDVDAQVWEDGGADDKEEGQEGRKPELQPVLARKAKKVAVVEDDE
EAWLEIQRQAVGGGEGGDMTARSSPIIQNPVSTSADALDIDIKSLSLDKE
LKLRFGDEGVGDGGGGGGGGGGRASRRRGGALGRGSTSMGGSVLGQLYQR
RCFFGAPKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSP
AFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDR
SHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRR
PENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLD
YYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADE
ELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREAL
LRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLR
LVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSR
HYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLR
LRRGGGRGLGGFQHPQQQLWGDGDGMGRGRNYLDPNLPLAELFWRSLLPW
NTIRSSGYG*
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Synonyms
Publications