NO01G02880, NO01G02880 (gene) Nannochloropsis oceanica

Overview
NameNO01G02880
Unique NameNO01G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2463
Alignment locationchr1:748111..750573 +

Link to JBrowse

Properties
Property NameValue
DescriptionTranscription factor 25
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:748111..750573 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006994TCF25
Homology
BLAST of NO01G02880 vs. NCBI_GenBank
Match: EWM29158.1 (Transcription factor 25 [Nannochloropsis gaditana])

HSP 1 Score: 409.8 bits (1052), Expect = 1.700e-110
Identity = 206/344 (59.88%), Postives = 251/344 (72.97%), Query Frame = 0
Query:  191 GSVLGQLYQRRCFFGAPKEDWPRPPTYVGGGIRMVRLEAPAEYENE--EEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGP-----GTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELD-GMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPW 527
            G  L ++YQRRCFFG PKEDW RPPT+VGGG+R+ R+ AP + E    EEA A W+ FEWSPA QALQ DY  VQETC+PNALA+FLA HPH+AEGLLTLAL+ A HGQMDR+HD+VRRCLFI+E AY+ESFRA F           SG P     G ++CRMDVRR ENR FFMAL+RHVQMLGGRGLYQTAFEV KF+LALDPRGDPTGI LC+D+YA++AGK +QLL M++AGF IGRG      +  E +    + A  D  E     +++     DWT+  LPN+CFSC+LA   S   E++ K+K  L+EAL RFP++L+PL+EK RNELGSR+ Q W
Sbjct:  179 GGTLSRMYQRRCFFGGPKEDWQRPPTFVGGGLRLSRVRAPVDCETSSGEEARA-WFAFEWSPALQALQHDYRRVQETCNPNALAIFLAQHPHYAEGLLTLALVLAAHGQMDRAHDHVRRCLFIHETAYVESFRALF-----------SGRPEDVLVGDVDCRMDVRRLENRLFFMALYRHVQMLGGRGLYQTAFEVGKFILALDPRGDPTGILLCIDFYAVKAGKAEQLLGMRDAGFTIGRGLAGSGSEEVEQERAKTEDAKLDGGEHQGYHLAEGTCGGDWTILDLPNICFSCSLAQKLSAKAEEQLKSKDDLQEALRRFPLVLRPLVEKCRNELGSRVKQEW 510          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: CBJ29245.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 268.5 bits (685), Expect = 6.000e-68
Identity = 183/555 (32.97%), Postives = 264/555 (47.57%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPA-----EYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEK-SRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHK--------------------------LEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLR--------RGGGRGLGGFQH-------------------PQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWN 702
            APK+DWP+PP++VGGG+ M R EA A      ++ +    A W+ FE S + + LQ+ +E +Q   DPN LA F +  P+HA+ LL L +++A  GQMDR+ ++V R L++ E+A +E+FR                 P    CR+D     N+ +F A+FRH+QM G  G  +TA EV + LL+LDP GDP G  L LD +AL + +   L+ +  +  P+GR    P    E +  G    AG D D  +            TV  LP +  S  LA    +   D   A+ A+   +LRFP++L+PL+EK       +     W  V++HP F  A+ RLP   VLL L  ++ QR  +LW  +  A + L+DGA   L      P   +                           E E V R YG G +P+ KY  ++++D+ + +  LP D N LDP L  P      R+RLR         GG RG GG Q                     + +  G           L P+ PLA+LFW++LLPWN
Sbjct:  229 APKDDWPKPPSFVGGGLGMKRCEAGAPAYLPRWQLDAHQGAEWFVFERSSSLEQLQRKFEAIQGMHDPNFLASFASRAPYHADALLQLGMVFAHTGQMDRASEFVGRSLYVLESATMEAFR-----------------PVDGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSHALTSRQGGFLIELHRSKLPVGR---SPSRAAEAFASG----AGVDGDVGV------------TVQDLPGLSMSVCLATL--DTTGDSTAAREAMASTMLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHE-RAEELLYDGAGIALQGLPSTPATREAAXXXXXXXXXXXXXGTIGADFCPSAAEVEVVQRAYGEG-SPIQKYLDLSLSDFDESFALLPQDANILDPRLMGPNFMNE-RVRLRVPPGVVPGGGGERGWGGGQEVLDEVLAMAMQVIGRQDAAARMRRQGGRRGQGEAEGNLSPSSPLAQLFWQTLLPWN 742          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: XP_008896079.1 (hypothetical protein PPTG_04025 [Phytophthora parasitica INRA-310] >ETN18403.1 hypothetical protein PPTG_04025 [Phytophthora parasitica INRA-310])

HSP 1 Score: 234.2 bits (596), Expect = 1.300e-57
Identity = 169/502 (33.67%), Postives = 247/502 (49.20%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRSSG 708
            +P ++WPRPPT+VGGGIR  R   P        +  S+Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + E+  P                   D+ A  +A +       S G SD +++ALPN+ FS ALA F+   V + ++AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +    + VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD     P L  P +     L         L      Q++               D N PL  LF ++LLPWN ++ +G
Sbjct:  185 SPLDEWPRPPTFVGGGIRWTRSNKPK--GAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-----------------AVDRFASDEAKK--TSWKSSIGASD-SIAALPNLQFSLALAHFF---VGNESEAKEKLATALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAKHALASPALVSANPQVLELPACLH---------KYIRAVTADYSDEITTLPAD----HPMLQPPQLQNGQPL-----DAEALAALARAQEEFEAGNLP-------ADAN-PLL-LFLQTLLPWNHVQGAG 613          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: KUF72085.1 (Transcription factor 25 [Phytophthora nicotianae])

HSP 1 Score: 234.2 bits (596), Expect = 1.300e-57
Identity = 169/502 (33.67%), Postives = 247/502 (49.20%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRSSG 708
            +P ++WPRPPT+VGGGIR  R   P        +  S+Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + E+  P                   D+ A  +A +       S G SD +++ALPN+ FS ALA F+   V + ++AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +    + VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD     P L  P +     L         L      Q++               D N PL  LF ++LLPWN ++ +G
Sbjct:  145 SPLDEWPRPPTFVGGGIRWTRSNKPK--GAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-----------------AVDRFASDEAKK--TSWKSSIGASD-SIAALPNLQFSLALAHFF---VGNESEAKEKLATALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAKHALASPALVSANPQVLELPACLH---------KYIRAVTADYSDEITTLPAD----HPMLQPPQLQNGQPL-----DAEALAALARAQEEFEAGNLP-------ADAN-PLL-LFLQTLLPWNHVQGAG 573          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: ETM36370.1 (hypothetical protein L914_16930 [Phytophthora parasitica])

HSP 1 Score: 232.3 bits (591), Expect = 4.800e-57
Identity = 156/431 (36.19%), Postives = 226/431 (52.44%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDP 637
            +P ++WPRPPT+VGGGIR  R   P        +  S+Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + E+        K P  D          R  SDA ++    S S G SD +++ALPN+ FS ALA F+   + + ++AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +    + VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD   L P
Sbjct:  433 SPLDEWPRPPTFVGGGIRWTRSNKPK--GAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFES--------KTPAVD----------RFASDAAKKTSWKS-SIGASD-SIAALPNLQFSLALAHFF---LGNESEAKEKLATALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAKHALASPALVSANPQVLELPACLH---------KYIRAVTADYSDEITTLPADHPMLQP 808          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: ETI36225.1 (hypothetical protein F443_17592 [Phytophthora parasitica P1569])

HSP 1 Score: 229.6 bits (584), Expect = 3.100e-56
Identity = 152/431 (35.27%), Postives = 223/431 (51.74%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDP 637
            +P ++WPRPPT+VGGGIR  R   P        +  S+Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + E+  P                   D+ A  +A +       S G SD +++ALPN+ FS ALA F+   + + ++AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +    + VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD   L P
Sbjct:  438 SPLDEWPRPPTFVGGGIRWTRSNKPK--GAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-----------------AVDRFASDEAKK--TSWKSSIGASD-SIAALPNLQFSLALAHFF---LGNESEAKEKLATALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAKHALASPALVSANPQVLELPACLH---------KYICAVTADYSDEITTLPADHPMLQP 813          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: ETK76479.1 (hypothetical protein L915_17129 [Phytophthora parasitica] >ETL29917.1 hypothetical protein L916_17024 [Phytophthora parasitica] >ETL83147.1 hypothetical protein L917_16851 [Phytophthora parasitica] >ETO64974.1 hypothetical protein F444_17634 [Phytophthora parasitica P1976] >ETP06077.1 hypothetical protein F441_17462 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 229.6 bits (584), Expect = 3.100e-56
Identity = 152/431 (35.27%), Postives = 223/431 (51.74%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDP 637
            +P ++WPRPPT+VGGGIR  R   P        +  S+Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + E+  P                   D+ A  +A +       S G SD +++ALPN+ FS ALA F+   + + ++AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +    + VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD   L P
Sbjct:  433 SPLDEWPRPPTFVGGGIRWTRSNKPK--GAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-----------------AVDRFASDEAKK--TSWKSSIGASD-SIAALPNLQFSLALAHFF---LGNESEAKEKLATALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAKHALASPALVSANPQVLELPACLH---------KYICAVTADYSDEITTLPADHPMLQP 808          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: ETP34186.1 (hypothetical protein F442_17449 [Phytophthora parasitica P10297])

HSP 1 Score: 229.6 bits (584), Expect = 3.100e-56
Identity = 152/431 (35.27%), Postives = 223/431 (51.74%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDP 637
            +P ++WPRPPT+VGGGIR  R   P        +  S+Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + E+  P                   D+ A  +A +       S G SD +++ALPN+ FS ALA F+   + + ++AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +    + VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD   L P
Sbjct:  185 SPLDEWPRPPTFVGGGIRWTRSNKPK--GAGWNSLCSYYEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-----------------AVDRFASDEAKK--TSWKSSIGASD-SIAALPNLQFSLALAHFF---LGNESEAKEKLATALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWK-VNDAQSFLLRSAKHALASPALVSANPQVLELPACLH---------KYICAVTADYSDEITTLPADHPMLQP 560          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: XP_002900881.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY59688.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 229.6 bits (584), Expect = 3.100e-56
Identity = 166/503 (33.00%), Postives = 248/503 (49.30%), Query Frame = 0
Query:  206 APKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDAD-EELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRSSG 708
            +P ++WPRPPT+VGGGIR  R   P         N  +Y   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + Q L+ + ++  P                   D+ A  +A+ ++     +S G +D ++ ALPN+ FS ALA F+   + +  +AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +   ++ VL  L+ +YV R++ +W   ++A  FL   A   L          ++ E     H         KY     ADY DE   LPAD     P L  P +     L         L      Q++               D N PL  LF ++LLPWN ++ +G
Sbjct:  662 SPMDEWPRPPTFVGGGIRWTRSNKPKGTGWNSLCN--YYEITWSIAYKKLQEEFELLQWTHDPNLIAHFLQRNPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIKTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAVDYYALTSRQCQFLIDLFDSKTP-----------------AVDRFASDEAESKQKSNWKNSMGSAD-SIVALPNLQFSLALAYFF---IGNETEAKENLAIALLKFPTILKPLLEKIAANPSS---SSWQPILSSRVFANARS---VDGVLQHLLDIYVTRNHSVWK-VNDAQSFLLRSAQHALASPALVSANAQVLELPTCLH---------KYIRAVTADYSDEITTLPAD----HPMLQPPQLQNGQPL-----DAEALAALARAQEEFEAGNLP-------ADAN-PLL-LFLQTLLPWNHVQGAG 1090          
BLAST of NO01G02880 vs. NCBI_GenBank
Match: XP_009521599.1 (hypothetical protein PHYSODRAFT_350291 [Phytophthora sojae] >EGZ26311.1 hypothetical protein PHYSODRAFT_350291 [Phytophthora sojae])

HSP 1 Score: 228.4 bits (581), Expect = 6.900e-56
Identity = 167/502 (33.27%), Postives = 243/502 (48.41%), Query Frame = 0
Query:  207 PKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSPAFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDRSHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRRPENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLDYYALRAGKRQQLLAMQEAGFPIGRGWKEPR-DDVEEWQDGSDKRAGSDADEELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREALLRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLRLVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSRHYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLRLRRGGGRGLGGFQHPQQQLWGDXXXXXXXRNYLDPNLPLAELFWRSLLPWNTIRSSG 708
            P ++WPRPPT+VGGGIR  R   P         N  ++   WS A++ LQ+++EL+Q T DPN +A FL  +P+H + LLT++ ++  HGQMD + D ++RC+++ E A+ + F               S G    NCRMD++   N  FF ALF  ++ +G RG  ++AFE AK LL+LDP+GDP  + L +DYYAL + + + L+ +         G K P  D +   +  S K+AG                +D T++ALPN+  S ALA F+   + +  +AK  L  ALL+FP +LKPL+EK      S     W  +L    FANA +      VL  L+ +YV R++ +W   ++A  FL  GA   L          ++ E     H         KY     ADY DE   LPAD     P L  P +     L         L      Q++               D N PL  LF ++LLPWN ++ +G
Sbjct:  665 PLDEWPRPPTFVGGGIRWTRSNKPKGAGWNSLCN--YFEITWSIAYKKLQEEFELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHASDCIKRCMYVLELAWADQF-------------DVSKG----NCRMDIQTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCRFLIDL--------FGSKTPAVDRLASSEAASKKKAGKKTSS-----------ADETIAALPNLQISLALAHFF---LGNETEAKDLLAAALLKFPTMLKPLLEKIAVNPSS---SSWQPILSSRVFANARSVDGEHSVLQHLLDIYVTRNHSIWK-VNDAQSFLLQGAQHALASPALVSANPQVLELPSCLH---------KYLRALSADYSDEITTLPAD----HPMLQPPQLQNGQPL-----DAEALAALARAQEEFEAGNLP-------ADAN-PLL-LFLQTLLPWNHVQGAG 1094          
The following BLAST results are available for this feature:
BLAST of NO01G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29158.11.700e-11059.88Transcription factor 25 [Nannochloropsis gaditana][more]
CBJ29245.16.000e-6832.97conserved unknown protein [Ectocarpus siliculosus][more]
XP_008896079.11.300e-5733.67hypothetical protein PPTG_04025 [Phytophthora para... [more]
KUF72085.11.300e-5733.67Transcription factor 25 [Phytophthora nicotianae][more]
ETM36370.14.800e-5736.19hypothetical protein L914_16930 [Phytophthora para... [more]
ETI36225.13.100e-5635.27hypothetical protein F443_17592 [Phytophthora para... [more]
ETK76479.13.100e-5635.27hypothetical protein L915_17129 [Phytophthora para... [more]
ETP34186.13.100e-5635.27hypothetical protein F442_17449 [Phytophthora para... [more]
XP_002900881.13.100e-5633.00conserved hypothetical protein [Phytophthora infes... [more]
XP_009521599.16.900e-5633.27hypothetical protein PHYSODRAFT_350291 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008040NSK008040Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02880.1NO01G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|235440gene_284Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g123gene1408Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02880.1NO01G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02880 ID=NO01G02880|Name=NO01G02880|organism=Nannochloropsis oceanica|type=gene|length=2463bp
ATGAGCGCGCGGCATCTTCAAGCGTTAAGAGCGCCAGGGCTGGGCTCACA
GGCTGCGAAGGACCAAGAGCTGGAGGAGGAGGAATCATCAGAGGAGGAGG
AGGTCGCAGCTCGCGGCGGGTTCCATTTGCTGCTCGATAGTAGCGACGAG
GAGGAGAAGGAGCAGGAGGATGTGGACGCGCAGGTATGGGAAGATGGTGG
AGCGGACGACAAAGAGGAAGGGCAGGAGGGGAGGAAGCCGGAGCTGCAGC
CCGTGCTTGCACGAAAGGCTAAGAAAGTAGCTGTGGTGGAAGACGACGAG
GAAGCCTGGCTGGAAATACAGAGACAGGCAGTGGGAGGAGGAGAGGGAGG
AGATATGACAGCAAGGAGCAGCCCCATTATTCAAAATCCTGTGAGTACAT
CGGCTGATGCCCTGGACATTGATATCAAGTCCCTCAGTTTGGACAAGGAG
CTCAAATTGCGCTTCGGGGACGAAGGCGTTGGAGACGGAGGCGGCGGCGG
AGGAGGAGGTGGTGGAAGAGCCAGTCGACGGCGCGGCGGTGCGCTTGGAC
GTGGAAGTACTAGTATGGGTGGAAGCGTTTTGGGCCAGCTGTATCAGCGG
CGTTGCTTTTTTGGCGCACCGAAGGAAGACTGGCCCAGACCTCCGACTTA
TGTGGGAGGGGGCATTCGGATGGTTCGGTTGGAGGCACCGGCGGAATACG
AGAACGAGGAAGAGGCTAATGCTTCCTGGTATGGCTTTGAATGGTCCCCG
GCGTTTCAGGCACTGCAGCAAGATTATGAGCTCGTCCAAGAAACCTGCGA
CCCTAACGCGCTTGCCGTCTTTTTGGCGCATCACCCTCACCATGCGGAGG
GCCTTCTCACGCTTGCATTGATCTATGCCACACATGgtacgtgagattga
tgtcggatcggtccataaattcatctagaggatcacaccttagcatttgt
cttcgcaggggcataagtcgcctgaccagattgctcacgccactcttctt
taccacatccttccacacacgtattccgctctttactcccaacagGACAA
ATGGATCGATCTCACGACTATGTGCGACGCTGCCTTTTTATTTATGAGGC
CGCTTATATTGAATCCTTTCGCGCCGCTTTCACCTATTCTCTCGGCACCG
CCACTGGAGCTGCGAGTGGAGGACCCGGGACGATTAACTGCAGGATGGAC
GTTCGGCGACCGGAGAATCGCCCCTTCTTCATGGCGCTCTTTCGGCACGT
GCAGATGCTTGGAGGGCGCGGACTGTATCAGACCGCCTTCGAAGTGGCCA
AGTTTCTGCTCGCACTCGATCCCAGGGGAGATCCAACGGGCATCTGGTTG
TGCCTGGACTACTATGCGCTTCGAGCAGGCAAAAGACAGCAGTTGTTGGC
TATGCAAGAAGCGGGTTTCCCCATCGGTCGGGGATGGAAGGAGCCTAGAG
ATGATGTTGAGGAGTGGCAAGATGGGAGCGACAAGAGAGCAGGCAGTGAT
GCCGACGAGGAGCTCGACGGCATGTCTGACTCTGCCGGTTTCTCAGACTG
GACGGTGTCGGCCTTGCCTAATGTGTGCTTCTCTTGCGCGCTGGCTCTCT
TTTGGAGCAACTTGGTCGAGGATCGGGCTAAAGCCAAGACTGCGCTACGC
GAAGCTCTCCTGCGTTTTCCTGTCCTGCTCAAGCCCCTGATTGAGAAGAG
TCGAAACGAGTTGGGCTCCCGCATCACCCAGCCATGgtgagtaatttaat
gcttgttggacagagaagagcggcaacaattacagacagagaagagcgac
aaaaattataacttgtttgtttaaatttaaatccaaaatttatttcctca
cgtattcttcttgcacacatttgcctcgttgtacctttaccacacatgac
gaatatacagGGACGGCGTCTTGCGACACCCCTTCTTTGCCAATGCGGAG
GCGCGTTTGCCGCTGGAATGCGTGCTTTTGCGCTTGGTGGCTGTCTACGT
GCAACGAAGCTATGATCTTTGGGCCGGCGACTCGGAGGCTATGCAATTTT
TGTTCGATGGAGCCTGGGCCGTGCTGATTGAGTTTGAGCGGGAGCCAGGA
GCGCACAAGCTGGAGGAGGAAGAGGTGTCTCGGCACTACGGCTACGGTCA
CAATCCTTTGGACAAGTATCGCGGAGTCGCCGTCGCGGACTATGGTGACG
AGTGGCCTCGATTACCTGCCGACCTCAACCCTCTCGACCCGGCCTTGGCG
GATCCAGCTGTTGCCAGGCGTGGCCGATTGCGTCTTCGCCGAGGAGGGGG
AAGAGGGTTGGGCGGTTTCCAGCATCCTCAGCAGCAATTGTGGGGCGACG
GCGATGGCATGGGGCGAGGGCGCAACTATCTTGATCCAAATCTGCCTCTG
GCGGAGTTGTTTTGGCGGAGCCTTTTGCCGTGGAACACCATTAGGAGCAG
TGGGTATGGATGA
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protein sequence of NO01G02880.1

>NO01G02880.1-protein ID=NO01G02880.1-protein|Name=NO01G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=710bp
MSARHLQALRAPGLGSQAAKDQELEEEESSEEEEVAARGGFHLLLDSSDE
EEKEQEDVDAQVWEDGGADDKEEGQEGRKPELQPVLARKAKKVAVVEDDE
EAWLEIQRQAVGGGEGGDMTARSSPIIQNPVSTSADALDIDIKSLSLDKE
LKLRFGDEGVGDGGGGGGGGGGRASRRRGGALGRGSTSMGGSVLGQLYQR
RCFFGAPKEDWPRPPTYVGGGIRMVRLEAPAEYENEEEANASWYGFEWSP
AFQALQQDYELVQETCDPNALAVFLAHHPHHAEGLLTLALIYATHGQMDR
SHDYVRRCLFIYEAAYIESFRAAFTYSLGTATGAASGGPGTINCRMDVRR
PENRPFFMALFRHVQMLGGRGLYQTAFEVAKFLLALDPRGDPTGIWLCLD
YYALRAGKRQQLLAMQEAGFPIGRGWKEPRDDVEEWQDGSDKRAGSDADE
ELDGMSDSAGFSDWTVSALPNVCFSCALALFWSNLVEDRAKAKTALREAL
LRFPVLLKPLIEKSRNELGSRITQPWDGVLRHPFFANAEARLPLECVLLR
LVAVYVQRSYDLWAGDSEAMQFLFDGAWAVLIEFEREPGAHKLEEEEVSR
HYGYGHNPLDKYRGVAVADYGDEWPRLPADLNPLDPALADPAVARRGRLR
LRRGGGRGLGGFQHPQQQLWGDGDGMGRGRNYLDPNLPLAELFWRSLLPW
NTIRSSGYG*
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Synonyms
Publications