NO01G02790, NO01G02790 (gene) Nannochloropsis oceanica

Overview
NameNO01G02790
Unique NameNO01G02790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1364
Alignment locationchr1:724060..725423 -

Link to JBrowse

Properties
Property NameValue
DescriptionMethylmalonic aciduria type a mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:724060..725423 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005129ArgK
Homology
BLAST of NO01G02790 vs. NCBI_GenBank
Match: EWM29135.1 (methylmalonic aciduria type a mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 382.5 bits (981), Expect = 1.500e-102
Identity = 214/393 (54.45%), Postives = 258/393 (65.65%), Query Frame = 0
Query:   17 PIKRLSLSMRGWIISPACTFSTSAISPRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVHL--GYAVAAGAAR---------------------------------------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQRT 363
            P+ +    +R   +  +  FST +++P    LAEGVL+G+RL+LSRAITLIES+KESHR +AEALLDHVV ERSR+V+   R                            +  RPLR+GIAGPPGAGKSTFIE+LG YL DSK LRVAVIAVDPSSSRSGGSILGDKTRMYEL+KDP+AFV       V  G AR                                              GDELQGVKKGIMEVADV+VVNKADGHLLTAAQHTAA Y+HALCFQRRKW+ W P+VT+CSAL R +IA VWE+V  CSDV  ++G+LRLKR++Q ++W+W+SLED+LVR+ R S  ++    RME+EL  GTLTPRSAAE+LL  F EEQ++
Sbjct:   20 PLTKPLTPIRSATVECSVGFSTCSMTPETRQLAEGVLRGNRLALSRAITLIESTKESHRLDAEALLDHVVYERSRRVREKGR------LKPGNSTSNAACVADEGRIGTSENVRPLRVGIAGPPGAGKSTFIEALGKYLTDSKKLRVAVIAVDPSSSRSGGSILGDKTRMYELAKDPKAFVRACPTSGVLGGVARYTNDVVLLCQAASFDIVFIESVGLGQSETIIDQASDMLLLLVPPAGGDELQGVKKGIMEVADVIVVNKADGHLLTAAQHTAAAYQHALCFQRRKWDAWMPSVTLCSALERHRIADVWEQVCSCSDVFRRSGYLRLKRQNQDKYWVWNSLEDILVRRARTSSKIKAGVERMEKELGKGTLTPRSAAEILLADFFEEQKS 406          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: XP_009526966.1 (hypothetical protein PHYSODRAFT_315055 [Phytophthora sojae] >EGZ17908.1 hypothetical protein PHYSODRAFT_315055 [Phytophthora sojae])

HSP 1 Score: 235.3 bits (599), Expect = 3.000e-58
Identity = 150/366 (40.98%), Postives = 198/366 (54.10%), Query Frame = 0
Query:   43 PRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH------------------------------LGYAVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            P    LA+GVL+G+R +LSR+ITL+ES+ +S  ++AE LLD V+ +R R +K      +                          G    R+GIAGPPGAGKSTFIE+LG + L ++G +VAV+A+DPSSSRSGGSILGDKTRM +LS DP AFV                               L  +V  G +                   GDELQG KKGI+E+AD+VVVNKADG L   A+HTA +Y HA+   RRK   W P V M SAL ++ I KVW  +      + +   +  KR  Q   WMW+ L + L+R V  S AV  KA +M+E+L  G ++PRSAA  +L  FL+ Q+
Sbjct:    3 PMTRRLADGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQR-RSLKPAHVDQA--------------------------GLTSFRLGIAGPPGAGKSTFIETLGQF-LTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGQKKGIVEIADIVVVNKADGELAAPAKHTAVDYMHAMHLMRRKDPDWEPKVKMISALEKKGIDKVWAIIEEYRKTMGELDKIAQKRNAQSSKWMWNQLNEQLMRSVSRSAAVRHKADKMKEDLVHGFISPRSAAATVLELFLKSQQ 340          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: GAX96439.1 (LAO/AO transport system ATPase [Pythium insidiosum])

HSP 1 Score: 234.6 bits (597), Expect = 5.000e-58
Identity = 152/366 (41.53%), Postives = 191/366 (52.19%), Query Frame = 0
Query:   43 PRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH------------------------LGY------AVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            P    L EGV+ G+R +LSRAITL ESS +   Q+AE +LD V+++R      + R +S                          G    R+GIAGPPGAGKSTFIESLG +L + +G +VAV+A+DPSSSRSGGSILGDKTRM  LS DP AFV                          GY      +V  G +                   GDELQG KKGIME+ADV+VVNKADG L +AA+H A ++ HAL   RRK   W P V MCSA+    + KVWE        +     +  KR DQ   WMW+ L + L++ V     V  KA +M ++L  G L+PRSAA  +L  FL  QR
Sbjct:    3 PSTQRLVEGVIAGNRTALSRAITLAESSLKRDEQQAELMLDTVLKKRRDARHGHARQSSSL------------------------GLPSFRLGIAGPPGAGKSTFIESLGQHLTE-RGHKVAVLAIDPSSSRSGGSILGDKTRMTNLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIIIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADVIVVNKADGELKSAAKHAAVDFMHALQLLRRKDPDWEPKVKMCSAIEGAGVDKVWEVCEEYRSKMXALSKIAQKRNDQSSKWMWNQLNEQLMKAVSSDPNVRDKATQMNQDLVLGFLSPRSAAAHILELFLTSQR 343          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: POM75462.1 (LAO/AO transport system ATPase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 233.4 bits (594), Expect = 1.100e-57
Identity = 156/369 (42.28%), Postives = 201/369 (54.47%), Query Frame = 0
Query:   43 PRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVHL------------------------GY------AVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVW---EEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            P    L +GVL+G+R +LSR+ITL+ES+ +S  ++AE LLD V+ +R R +K     ++                          G    R+GIAGPPGAGKSTFIE+LG + L + G +VAV+A+DPSSSRSGGSILGDKTRM +LS DP AFV                          GY      +V  G +                   GDELQG KKGI+E+AD+VVVNKADG L   A+HTA +Y HA+   RRK   W P V M SAL  + I KVW   EE  R    LDK   +  KR  Q   WMW+ L + L+R V  S AV+ KA RM+++L  G ++PRSAA  +L  FL+ Q+
Sbjct:    3 PMTQRLVDGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQR-RSLKPAHVDSA--------------------------GLTSFRLGIAGPPGAGKSTFIETLGQF-LTAHGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAGGYDIIIVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGQKKGIVEIADIVVVNKADGELKAPAKHTAVDYMHAMHLMRRKDPDWEPKVKMISALENKGIDKVWAIIEEYRRTMGELDK---IAQKRNAQSSKWMWNQLNEQLMRSVSRSSAVQHKADRMKKDLVHGFISPRSAATTVLELFLKSQQ 340          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: OWZ20288.1 (LAO/AO transport system ATPase [Phytophthora megakarya])

HSP 1 Score: 229.9 bits (585), Expect = 1.200e-56
Identity = 149/366 (40.71%), Postives = 198/366 (54.10%), Query Frame = 0
Query:   43 PRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVHL------------------------GY------AVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            P    LA+GVL+G+R +LSR+ITL+ES+ +S  ++AE LLD V+ +R R +K  R   +                          G    R+GIAGPPGAGKSTFIE+LG + L + G +VAV+A+DPSSSRSGGSILGDKTRM +LS DP AFV                          GY      +V  G +                   GD+LQG KKGIME+AD+VVVNKADG L   A+HTA +Y HA+   RRK   W P V M SA+  + + KVW  +      + +   +  KR  Q   WMW+ L + L+R V  S AV  KA +M+++L  G ++PRSAA  +L  FL+ Q+
Sbjct:    3 PMTQRLADGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQR-RSLKPARVDAA--------------------------GLTSFRLGIAGPPGAGKSTFIETLGQF-LTAHGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPTRGTLGGVAQHTNDIVLLCEAGGYDIIIVESVGLGQSEIVIDDTVDMVMLLVPPAGGDDLQGQKKGIMEIADIVVVNKADGDLKGTAKHTAVDYMHAMHLMRRKDPDWEPKVKMISAMENKGVDKVWAIIEEYRTNMGELDKIAQKRNAQSSKWMWNQLNEQLMRSVSRSSAVRHKADKMKKDLVHGFISPRSAAGTVLELFLKSQQ 340          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: GBG31223.1 (Methylmalonic aciduria type A-like, mitochondrial [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 228.0 bits (580), Expect = 4.700e-56
Identity = 147/366 (40.16%), Postives = 186/366 (50.82%), Query Frame = 0
Query:   41 ISPRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH-----------------------------------------------LGYAVAAGAARRGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEE 360
            + P  L +A+GVL G+R+SLSRAITLIES KESH  +A+ LL++V+++R  K                                    T   R+GI G PG+GKS+ IE LG  L+  KG RVAV+AVDPSS+RSGGSILGDKTRM ELSK   A+V                                                +   V   A   GDELQGVKKGIME+AD+VVVNKADG L   A+H A +Y HAL   RRK E W P V  CSALR   I  VW+ V +    + ++G L LKR+ Q R WMW+   + L+ + +    +   A  + E L  G  TPR AA  L+  FL +
Sbjct:   28 MEPATLEMAKGVLAGNRVSLSRAITLIESWKESHTLQAQYLLEYVLKDRQEKG--------------------------------IDATSSFRLGICGTPGSGKSSTIERLGTMLVRDKGQRVAVLAVDPSSARSGGSILGDKTRMTELSKLEEAYVRPSPTRGSLGGVAQHTNDVVLLCEAAGFDIVIVESVGLGQSEVLIDEVVDMTVLLAAPAGGDELQGVKKGIMEIADMVVVNKADGDLEKVARHAATDYMHALQLMRRKREAWRPRVKKCSALRNTGIEDVWQVVEKFRKTMTESGDLLLKRQQQNRSWMWNQFNEQLMFRAKHDPELHHLADDLAETLGQGYGTPRHAARTLVSEFLRK 361          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: ETI51738.1 (LAO/AO transport system ATPase [Phytophthora parasitica P1569] >ETI51739.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica P1569] >ETK91620.1 LAO/AO transport system ATPase [Phytophthora parasitica] >ETK91621.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica] >ETL45031.1 LAO/AO transport system ATPase [Phytophthora parasitica] >ETL45032.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica] >ETL98184.1 LAO/AO transport system ATPase [Phytophthora parasitica] >ETL98185.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica] >ETP21511.1 LAO/AO transport system ATPase [Phytophthora parasitica CJ01A1] >ETP21512.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica CJ01A1] >ETP49426.1 LAO/AO transport system ATPase [Phytophthora parasitica P10297] >ETP49427.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica P10297] >KUF82041.1 Methylmalonic aciduria type A [Phytophthora nicotianae])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 145/371 (39.08%), Postives = 195/371 (52.56%), Query Frame = 0
Query:   38 TSAISPRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH------------------------------LGYAVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            T  + P    L EGVL+G+R +LSR+ITL+ES+ +S  ++AE LLD V+ +R      +  P                                 R+GIAGPPGAGKSTFIE+LG++ L ++G +VAV+A+DPSSSRSGGSILGDKTRM +LS DP AFV                               L  +V  G +                   GD+LQG KKGI+E+AD+VVVNKADG L   A+HTA +Y HA+   RRK   W P V M SAL ++ I  VW  +      + +   +  KR  Q   WMW+ L + L+R V  S  V  KA +M+++L  G ++PRSAA  +L  FL+ Q+
Sbjct:   31 TREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPE---------------------------LTSFRLGIAGPPGAGKSTFIETLGLF-LTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLKGPAKHTAVDYMHAMHLMRRKDPDWEPKVKMISALEKKGIDNVWAIIEEYRKTMGELDKIAQKRNAQSSKWMWNQLNEQLMRSVSRSITVRHKAEKMKKDLVHGFISPRSAAATVLELFLKSQK 373          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: ETM51344.1 (LAO/AO transport system ATPase [Phytophthora parasitica] >ETM51345.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 145/371 (39.08%), Postives = 195/371 (52.56%), Query Frame = 0
Query:   38 TSAISPRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH------------------------------LGYAVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            T  + P    L EGVL+G+R +LSR+ITL+ES+ +S  ++AE LLD V+ +R      +  P                                 R+GIAGPPGAGKSTFIE+LG++ L ++G +VAV+A+DPSSSRSGGSILGDKTRM +LS DP AFV                               L  +V  G +                   GD+LQG KKGI+E+AD+VVVNKADG L   A+HTA +Y HA+   RRK   W P V M SAL ++ I  VW  +      + +   +  KR  Q   WMW+ L + L+R V  S  V  KA +M+++L  G ++PRSAA  +L  FL+ Q+
Sbjct:   31 TREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPE---------------------------LTSFRLGIAGPPGAGKSTFIETLGLF-LTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLKGPAKHTAVDYMHAMHLMRRKDPDWEPKVKMISALEKKGIDNVWAIIEEYRKTMGELDKIAQKRNAQSSKWMWNQLNEQLMRSVSRSITVRHKAEKMKKDLVHGFISPRSAAATVLELFLKSQK 373          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: ETO80485.1 (LAO/AO transport system ATPase [Phytophthora parasitica P1976] >ETO80486.1 LAO/AO transport system ATPase, variant 1 [Phytophthora parasitica P1976] >KUF82318.1 Methylmalonic aciduria type A [Phytophthora nicotianae])

HSP 1 Score: 224.9 bits (572), Expect = 4.000e-55
Identity = 144/366 (39.34%), Postives = 193/366 (52.73%), Query Frame = 0
Query:   43 PRVLGLAEGVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH------------------------------LGYAVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            P    L EGVL+G+R +LSR+ITL+ES+ +S  ++AE LLD V+ +R      +  P                                 R+GIAGPPGAGKSTFIE+LG++ L ++G +VAV+A+DPSSSRSGGSILGDKTRM +LS DP AFV                               L  +V  G +                   GD+LQG KKGI+E+AD+VVVNKADG L   A+HTA +Y HA+   RRK   W P V M SAL ++ I  VW  +      + +   +  KR  Q   WMW+ L + L+R V  S  V  KA +M+++L  G ++PRSAA  +L  FL+ Q+
Sbjct:    3 PMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPE---------------------------LTSFRLGIAGPPGAGKSTFIETLGLF-LTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLKGPAKHTAVDYMHAMHLMRRKDPDWEPKVKMISALEKKGIDNVWAIIEEYRKTMGELDKIAQKRNAQSSKWMWNQLNEQLMRSVSRSITVRHKAEKMKKDLVHGFISPRSAAATVLELFLKSQK 340          
BLAST of NO01G02790 vs. NCBI_GenBank
Match: OQR95949.1 (methylmalonic aciduria type A protein, mitochondrial [Thraustotheca clavata])

HSP 1 Score: 216.9 bits (551), Expect = 1.100e-52
Identity = 147/376 (39.10%), Postives = 193/376 (51.33%), Query Frame = 0
Query:   38 TSAISPRVLGLAEGVLKGD-----RLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPNSXXXXXXXXXXXXXXXXXXXXXXXLRKGTRPLRIGIAGPPGAGKSTFIESLGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVH------------------------LGY------AVAAGAAR-----------------RGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKHALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLKRRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAEMLLVAFLEEQR 362
            TS + P    L +G+  G      R SL+R+ITL+ES+ +  R++AE LLDHV+ +R  K + +                               G    R+GIAGPPGAGKSTFIE+LG+  L  KG +VAV+A+DPSSS +GGSILGDKTRM  L+  P A+V                          GY      +V  G +                   GDELQG KKGIME+ADVVVVNKADG L +AA+HTA +Y HAL   RRK   W PTV MCSA   E I  VW+ ++   D ++    +  KR  Q   WMW+ L + L+   + +  V+ +A  +  +LA G ++PRSAA  LL  FL   R
Sbjct:    2 TSRMLPTTKRLIDGLFNGSSSAVARTSLARSITLVESTLQRDREQAELLLDHVLEQRKAKHEGH------------------------------TGDSSFRVGIAGPPGAGKSTFIETLGL-SLTKKGHKVAVLAIDPSSSVTGGSILGDKTRMTYLANCPDAYVRPSPTRGTLGGVAQHTNEIVLLCEACGYDIILVESVGLGQSEIIIDDTVDTVMLLVPPAGGDELQGSKKGIMEIADVVVVNKADGELKSAAKHTAVDYMHALQLARRKEPEWKPTVKMCSAREGEGIDGVWDVLTEFRDTMNAVNKIEGKRSRQSSKWMWNQLNEELMSLAKKNRFVKDEASSLAPDLAHGFISPRSAARKLLEDFLTHPR 346          
The following BLAST results are available for this feature:
BLAST of NO01G02790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29135.11.500e-10254.45methylmalonic aciduria type a mitochondrial [Nanno... [more]
XP_009526966.13.000e-5840.98hypothetical protein PHYSODRAFT_315055 [Phytophtho... [more]
GAX96439.15.000e-5841.53LAO/AO transport system ATPase [Pythium insidiosum... [more]
POM75462.11.100e-5742.28LAO/AO transport system ATPase [Phytophthora palmi... [more]
OWZ20288.11.200e-5640.71LAO/AO transport system ATPase [Phytophthora megak... [more]
GBG31223.14.700e-5640.16Methylmalonic aciduria type A-like, mitochondrial ... [more]
ETI51738.11.800e-5539.08LAO/AO transport system ATPase [Phytophthora paras... [more]
ETM51344.11.800e-5539.08LAO/AO transport system ATPase [Phytophthora paras... [more]
ETO80485.14.000e-5539.34LAO/AO transport system ATPase [Phytophthora paras... [more]
OQR95949.11.100e-5239.10methylmalonic aciduria type A protein, mitochondri... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008049NSK008049Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02790.1NO01G02790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576776gene_272Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g113gene1418Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02790.1NO01G02790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02790 ID=NO01G02790|Name=NO01G02790|organism=Nannochloropsis oceanica|type=gene|length=1364bp
ATGCGGCGGCAGCTATGCTGCGCTGCTGCTGCTACTGCCGCAAGTACTCC
CATCAAGCGACTATCCTTGTCGATGCGAGGTTGGATCATCAGTCCAGCCT
GTACATTTTCCACCTCTGCCATAAGCCCGCGGGTCCTTGGCCTGGCCGAA
GGCGTGCTCAAGGGCGACCGTCTCTCGTTGAGCCGGGCCATAACGCTGAT
TGAGTCCTCCAAGGAAAGCCATAGACAAGAGGCTGAGGCATTATTGGACC
ACGTCGTCCGCGAGCGCAGTCGAAAGGTCAAAACATATCGGCGGCCGAAT
TCGAATACTGCTATGGCATCTAGCAGCGACAGCAGAAGCAGCAGCAGCAG
CAGCGGCAGCACCAGCGGCAGCCTCCGAAAGGGCACTCGCCCCCTGCGGA
TTGGCATCGCCGGCCCCCCAGGTGCCGGCAAGTCCACTTTTATTGAGTCC
CTGGGCATGTATTTGCTGGATAGCAAGGGACTGgtgcgtctacggatgag
ggggaaagacaataaatctggatgcagtagaggagagtaaaatgtaccac
attcgcctcacttctctcatttcttctacccctatgaccacgcacagCGC
GTAGCCGTCATCGCGGTCGATCCCTCTTCGTCTCGCAGCGGTGGTTCAAT
CTTGGGGGACAAGACACGGATGTACGAGCTGTCTAAGGACCCTCGGGCAT
TCGTACgtgcctgcccgaccagtggggtgcttgggggggtggcacgctat
acgaatgacgtcgtgctgctatgccaggcggctgcttttgatgttgtatt
catcgagacggtggggctgggacaatcggagatcatgatcgaccagACCT
CGGATATGCTGTTGCTGCTGGTGCCGCCCGGAGGGGGGATGAGCTGCAGG
GCGTTAAAAAGGGCATTATGGAGGTGGCCGACGTGGTGGTGGTCAATAAG
GCTGATGGCCACTTACTCACAGCTGCGCAGCACACAGCTGCTGAGTATAA
ACATGCCTTGTGTTTTCAGCGACGGAAATGGGAGCCGTGGACGCCGACTG
TGACAATGTGTTCAGCTTTAAGAAGGGAGAAGATTGCGAAGGTCTGGGAG
GAGGTTAGTCGGTGCAGTGACGTGTTGGACAAGACAGGGTTTTTGAGGTT
GAAGAGGAGAGATCAAGGAAGGCATTGGATGTGGAGTAGTTTGGAAGATT
TGCTCGTGAGGAAGGTGAGGGGGTCGGGGGCGGTGGAACGGAAGGCGGTA
AGGATGGAGGAGGAGCTGGCGGATGGTACCTTGACGCCACGATCGGCGGC
CGAGATGTTGTTAGTTGCCTTTTTAGAGGAGCAACGGACCACCGAAGTGG
CGAGAAAGAAGTAG
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protein sequence of NO01G02790.1

>NO01G02790.1-protein ID=NO01G02790.1-protein|Name=NO01G02790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MRRQLCCAAAATAASTPIKRLSLSMRGWIISPACTFSTSAISPRVLGLAE
GVLKGDRLSLSRAITLIESSKESHRQEAEALLDHVVRERSRKVKTYRRPN
SNTAMASSSDSRSSSSSSGSTSGSLRKGTRPLRIGIAGPPGAGKSTFIES
LGMYLLDSKGLRVAVIAVDPSSSRSGGSILGDKTRMYELSKDPRAFVHLG
YAVAAGAARRGDELQGVKKGIMEVADVVVVNKADGHLLTAAQHTAAEYKH
ALCFQRRKWEPWTPTVTMCSALRREKIAKVWEEVSRCSDVLDKTGFLRLK
RRDQGRHWMWSSLEDLLVRKVRGSGAVERKAVRMEEELADGTLTPRSAAE
MLLVAFLEEQRTTEVARKK*
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Synonyms
Publications