NO01G02710, NO01G02710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02710 vs. NCBI_GenBank
Match: EWM29167.1 (PsbB mRNA maturation factor [Nannochloropsis gaditana]) HSP 1 Score: 473.4 bits (1217), Expect = 1.600e-129 Identity = 510/655 (77.86%), Postives = 552/655 (84.27%), Query Frame = 0 Query: 1 MRRRCRSAMAQAAGYMWSIALLLHGSGCLLSRHCFGNVVHAFVV----PLPSRAVVEVRPPVSRAGKLPSQYDELICRMMVGDTHVPSHKAVSGTGTGTGIPAVPKQAGGAPP----PPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGSFNXXXXXXGQRRQIGS---QSTVKYHERKGLVVQVYQQAQKEARAGRLDKAEELFRRCLTMDRKDARSWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVQNTHKLLVAWAKLEEENFGDWEKATELLLRAIEEGGPDFTDATVALAHLELKKGNKERAVQILKDSKHQGRAGGSLFNTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVTYNAWAIMEERLAQDMRGPMRQVQIMRARKLFVLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLKQRNYAQAKRLLQQGLSENKLGKNVGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNSQLLVGA 645 M R RS+MA A +W I + L+ VV AF+ + ++AVV + P R P + L+CRM++G+T T + T + VP+ A P P R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G G + G+ S+ KYH+RKGLVV+VYQ+AQ+EAR+GRL+KAEELFRRCLTMDRKD RSWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QNTHKLLVAWAKLEEENFGDWEKATELLLRA+E+GGPDFTDATVALAHLE+KKGNKERAV IL+ SKHQG AGGSLFNTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVTYNAWAIMEERLA DMRGPMRQVQIMRARKLF+LGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSV++GWAM+SLKQRNYAQA+ LLQ+GLSENKLGKNVGFLYH+LGMLE+KLG +E AW+VF+EATDKYPRNSQLLVGA Sbjct: 1 MMLRHRSSMAPVAASLWPILVFC----SLIQLQSSMRVVEAFLARNFFSVSNKAVVGITMP--RLTSTPLHQNRLLCRMVLGET----------TASATHMNVVPQVADNISPIVQDPQRQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVAG-LTAVGTKKGHEQPYGTSRMHSSTKYHQRKGLVVRVYQEAQREARSGRLEKAEELFRRCLTMDRKDGRSWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQNTHKLLVAWAKLEEENFGDWEKATELLLRAMEDGGPDFTDATVALAHLEMKKGNKERAVDILQQSKHQGGAGGSLFNTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVTYNAWAIMEERLAHDMRGPMRQVQIMRARKLFMLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVLNGWAMLSLKQRNYAQARSLLQRGLSENKLGKNVGFLYHSLGMLEMKLGKIEDAWRVFKEATDKYPRNSQLLVGA 638
BLAST of NO01G02710 vs. NCBI_GenBank
Match: XP_002293432.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89168.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 116.3 bits (290), Expect = 4.900e-22 Identity = 98/355 (27.61%), Postives = 144/355 (40.56%), Query Frame = 0 Query: 352 KLLVAWAKLEEENFGDWEKATELLLRAIEEGGPDFTDATVALAHL----------ELKKGNKERAVQILKDSKHQGRAG---------GSLFNTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVTYNAWAIMEERLAQDMRGPMRQVQIMRARKLFVLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLKQRNYAQAKRLLQQGLS-------EN--KLGKNVGFLYHTLGMLELKL-GNVEGAWKVFQEATDKYPRNSQLLVGAGLAAEKNGEVDLARGFFKRGVECDRLHHQAWQA 678 ++ +A + LEE F D EKA++LL A+ +G + A +ALA L +KK KE + K QG G G LFN W T A+A++E R D + I R+LF + DP HGP YNA+G +E + GN+ A++++ GV A+C D SV G A + + A+ +LQ+GLS N + +NV FL HTL M+EL N + A ++ + +S LL+G L + G AR F++ ++ D H QAWQA Sbjct: 99 EVYLAASSLEETVFQDVEKASQLLKVALADGTVQDSRAYMALARLGTSGGLVDDAVIKKRLKEICTKQYKTQTSQGEEGNVALFPVKDGRLFNAWAKLESKSGSLMEARKILKKGMKLYPKDHTLLQAAGNIQERLGNFTDARDLYSASLHIEPSAPTLIAYAMLELRSPFDKKAS----NITMVRRLFQEALLIDPKHGPAYNAFGNLERRQGNIAVAKQLYEDGVNANCTDASSVYHGLAKLHISLGEIEDARNVLQRGLSLFRPKGNSNFVQRNENVAFLAHTLAMIELNCNNNAKAAKEILNQGLWHRRSSSPLLLGKALVESRLGNEYGARDMFEQAIKADPDHAQAWQA 449
BLAST of NO01G02710 vs. NCBI_GenBank
Match: GAX18148.1 (hypothetical protein FisN_25Hh131 [Fistulifera solaris]) HSP 1 Score: 113.2 bits (282), Expect = 4.100e-21 Identity = 67/170 (39.41%), Postives = 93/170 (54.71%), Query Frame = 0 Query: 518 RKLFVLGMAADPSHGPLYNAYGR-MEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLKQRNYAQAKRLLQQGLSENK---LGKN------VGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNSQLLVGAGLAAEKNGEVDLARGFFKRGVECDRLHHQAWQA 678 ++LF + DP H P YNAY R + E+ + A+ +F GV A CPD S+ G+A + L N A++LL +G + K +GK+ FL HTLGMLEL + A +VF + +Y +SQLL+GA L + G VD AR F++ V DR H AWQA Sbjct: 439 KQLFEEALLIDPRHAPAYNAYARCVFEQEDDERQARSIFERGVRAKCPDAASLYHGFAKLELALGNIDSARKLLIEGRNAAKRQEIGKDSPHRERALFLMHTLGMLELNSNRIVSALEVFSDGVTQYGNSSQLLLGAALCEVRLGNVDKARILFEKSVINDRRHAHAWQA 608
BLAST of NO01G02710 vs. NCBI_GenBank
Match: GAX10021.1 (hypothetical protein FisN_25Lh131 [Fistulifera solaris]) HSP 1 Score: 109.0 bits (271), Expect = 7.800e-20 Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 0 Query: 518 RKLFVLGMAADPSHGPLYNAYGR-MEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLKQRNYAQAKRLLQQGLSENK---LGKN------VGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNSQLLVGAGLAAEKNGEVDLARGFFKRGVECDRLHHQAWQA 678 ++LF + DP H P YNAY R + E+ + A+ +F GV A C D S+ G+A + L N A++LL +G + K +GK+ FL HTLGMLEL + A ++F + +Y +SQLL+GA L + G V+ AR F++ V DR H AWQA Sbjct: 447 KQLFEEALLIDPRHAPAYNAYARCVFEQEDDEQQARSIFERGVRAKCSDAASLYHGFAKLELALGNIGSARKLLIEGRNAAKRQEIGKDSPHRERALFLMHTLGMLELNSNRIVAALEIFNDGVAQYGNSSQLLLGAALCEVRLGNVEKARILFEKSVMNDRRHAHAWQA 616
BLAST of NO01G02710 vs. NCBI_GenBank
Match: XP_002181882.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46422.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 95.5 bits (236), Expect = 8.900e-16 Identity = 59/184 (32.07%), Postives = 82/184 (44.57%), Query Frame = 0 Query: 504 DMRGPMR-QVQIMRARKLFVLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPS---------VISGWAMVSLKQRNYAQAKRLLQQGLSENKLGKNVGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNSQLLVGAGLAAEKNGEVDLARGFFKRGVECDRLHHQAWQA 678 D+R P + R + LF + DP HGP YN+YG +E + GN+ A+ +F G+ AHC D+ S ++ + FL HTLGMLEL A +F + ++Y +SQLL+GA L K G AR F+R + D H QAWQA Sbjct: 386 DLRHPSSGEANFTRVKALFEEAILLDPRHGPAYNSYGNLELRQGNIRTARNIFERGILAHCSDVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDSPHRERALFLSHTLGMLELNSNRPIDALSIFIDGVNRYGNSSQLLLGAALCEVKLGNEVNARMLFERSLLVDEKHPQAWQA 569
BLAST of NO01G02710 vs. NCBI_GenBank
Match: OEU08376.1 (TPR-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 92.0 bits (227), Expect = 9.800e-15 Identity = 57/171 (33.33%), Postives = 75/171 (43.86%), Query Frame = 0 Query: 518 RKLFVLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLKQRNYA-----------QAKRLLQQGLSENKLGKNVGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNSQLLVGAGLAAEKNGEVDLARGFFKRGVECDRLHHQAWQA 678 R LF + DP +GP YNAYG E + GNL A+ +F G +C D +R S+ FL HTLGMLEL A+ +F + D+ +SQLL+GA L + G+ + ARGFF+R V D H AWQA Sbjct: 363 RGLFEEALMLDPRNGPAYNAYGNAELRRGNLQEARIIFERGTAMNCSDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXDTVRRNEDNVSSDTPNRDRAAFLSHTLGMLELNSNRPLDAFGIFMDGLDRCGNSSQLLLGAALCEMRMGKDEGARGFFERSVVADNKHAHAWQA 533
BLAST of NO01G02710 vs. NCBI_GenBank
Match: EJK61370.1 (hypothetical protein THAOC_18148 [Thalassiosira oceanica]) HSP 1 Score: 70.5 bits (171), Expect = 3.100e-8 Identity = 46/150 (30.67%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 531 HGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLKQRNYAQAKRLLQQGLS--------ENKLGKNVGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNS-QLLVGAGLAAEKNGEVDLARGFFKRGVECDRLH 672 HGPLYNAYG E + N A++++ G+ +C D SV G + + L +A+R+L++GLS +NV +L HTL ++EL N K Y R S QLL + + G+ A F++ ++ D+ H Sbjct: 568 HGPLYNAYGNFERRERNFDKARQLYEDGIRHNCTDSSSVYHGLSKLHLSLGEVEEARRVLKEGLSIFGSKADTHCLRNQNVAYLSHTLALIELNCNNNPAKAKRALVEGLLYQRYSPQLLSILAICEARLGDNVAAVKLFEQSLKADQHH 717
BLAST of NO01G02710 vs. NCBI_GenBank
Match: XP_005712096.1 (TPR repeat-containing protein [Chondrus crispus] >CDF32431.1 TPR repeat-containing protein [Chondrus crispus]) HSP 1 Score: 69.3 bits (168), Expect = 6.800e-8 Identity = 82/333 (24.62%), Postives = 123/333 (36.94%), Query Frame = 0 Query: 357 WAKLEEENFGDWEKATELLLRAIEEGGPDFTDATVALAHLELKKGNKERAVQILKDSKH-QGRAGGSLFNTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHV-VTYNAWAIMEERLAQDMRGPMRQVQIMRARKLFVLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVISGWAMVSLK-QRNYAQAKRLLQQGLSENKLGKNVGFLYHTLGMLELKLGNVEGAWKVFQEATDKYPRNSQLLVGAGLA---------AEKNGEVDLARGFFKRGVECDRLHHQAWQA 678 WA++ EE GD +A ELL +AI P FT++ VALA LE ++ RA++++ + + ++FN W + AWA+ + DP H V+ G++A C SV G+ + LK + A+A+ L ++G + + + F++ GMLEL V A ++F+ A +YPRNS++LVGA LA A+KN AR FFKR V D H AWQA Sbjct: 309 WAEM-EERIGDLPRARELLSKAI-TSQPHFTESYVALAKLEARRSCTTRALELIATAAGLSAKPPPAVFNAWAQIEWAYRGKVDEARSILQRGHMMHPKDPALLQSLGILEDKCGKTEVARKLFYKSVCVKPAGPAFVAWALXXXXXXXXXXXXXXXXXC----------LTIDPLHXXXXXXXXXXXXXXXXXXXXXXVYGRGLKA-CAS-SSVWHGYGQLELKLGGDPARARELFRKGTEKTR--GDTSFIWXXXGMLELTEKRVIEARQLFKNALKRYPRNSRVLVGAALAEAASCPQYIADKNS----ARDFFKRAVAADPTHAHAWQA 621
BLAST of NO01G02710 vs. NCBI_GenBank
Match: CBJ26790.1 (PsbB mRNA maturation factor Mbb1, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 68.6 bits (166), Expect = 1.200e-7 Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0 Query: 517 ARKLFVLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHC 564 AR+LF LG+ ADP+HGPLYNAYG ME K+GN+ A+ V++ G+ A C Sbjct: 573 ARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARNVYKRGIAARC 619 The following BLAST results are available for this feature:
BLAST of NO01G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02710 ID=NO01G02710|Name=NO01G02710|organism=Nannochloropsis oceanica|type=gene|length=3578bpback to top protein sequence of NO01G02710.1 >NO01G02710.1-protein ID=NO01G02710.1-protein|Name=NO01G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=900bpback to top Synonyms
Publications
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