NO01G02590, NO01G02590 (gene) Nannochloropsis oceanica

Overview
NameNO01G02590
Unique NameNO01G02590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length814
Alignment locationchr1:673473..674286 -

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Properties
Property NameValue
DescriptionSepiapterin reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:673473..674286 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO01G02590 vs. NCBI_GenBank
Match: EWM29124.1 (sepiapterin reductase [Nannochloropsis gaditana])

HSP 1 Score: 245.7 bits (626), Expect = 1.400e-61
Identity = 123/197 (62.44%), Postives = 150/197 (76.14%), Query Frame = 0
Query:   55 YTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFG--APPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGK-----RVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYDDV 245
            Y   YLFNNAG VGPIAYAKDL  DL ALRQS+DLN+TS + +TSLFL  F   + PS K+P   +  ++NISS+AAIQPFH+W +YC GKAARDMF QVV QE Q EG   G+      ++   KTLNYAPGPL+TDMQ ELRES+SIHPPTR WS +AF+EG LVRPE+SASKC+  LT++ ++SG H+DYYDD+
Sbjct:  110 YGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRFCTLSSPSNKVP---ALFIINISSMAAIQPFHSWGVYCAGKAARDMFLQVVAQEHQGEGSARGEGSMAGGMSVHLKTLNYAPGPLDTDMQIELRESESIHPPTREWSEKAFREGWLVRPEESASKCLRILTKNDFKSGVHIDYYDDM 303          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: OZJ05565.1 (hypothetical protein BZG36_01714 [Bifiguratus adelaidae])

HSP 1 Score: 141.4 bits (355), Expect = 3.800e-30
Identity = 83/192 (43.23%), Postives = 109/192 (56.77%), Query Frame = 0
Query:   52 SLPYTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHF-GAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            S P TKA L NNAG +GP++  K    +   +    +LNV SF  L++ F+ HF  A      P     V+VNISSL A++PF  W +Y  GKAARDMF Q++  E   EG           KTL+YAPGPL  DMQ ++RES       R ++ +   EGKLV   DSA K +  L +DT+ SG+HVD+YD
Sbjct:   92 SPPITKAVLINNAGTLGPLS-KKMSEYNTKEIHDYFNLNVVSFAALSASFVKHFRPAETDDVKPIEPRLVIVNISSLLAVKPFKNWGLYAAGKAARDMFLQIMAME---EGH-------NDIKTLSYAPGPLEGDMQQQVRESIGDEEQRRYFAQQ-HAEGKLVEMHDSAQKLLRLLQDDTFTSGSHVDFYD 271          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: EJK58975.1 (hypothetical protein THAOC_20865 [Thalassiosira oceanica])

HSP 1 Score: 139.4 bits (350), Expect = 1.500e-29
Identity = 84/203 (41.38%), Postives = 109/203 (53.69%), Query Frame = 0
Query:   55 YTKAYLFNNAGLVGPIAYAKDLH-------KDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVV--------GQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            Y    L +NAG V PI  A  +          + ALR SIDLNVTS +++TS F+  F           +   VVNISSL A+ PF T S+YC GKAARDMF QVV        G+E          +  T FKTLNYAPGP +T+M   L ESK +      +   +  +  LVRP+D+A+K +  L ED + SG H+D+YD
Sbjct:  113 YGSCTLMSNAGSVEPIGTASSISVGGSSSPAGMKALRSSIDLNVTSSIWITSQFVSAFSG--------CNFMRVVNISSLCAVDPFATMSVYCAGKAARDMFHQVVAKEMAKDSGEEDDDASRTNQHQSCTAFKTLNYAPGPCDTEMTDTLAESKKLDEDLHTYFATSKLKETLVRPKDTAAKLVGLLVEDEYISGDHIDFYD 307          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: KYQ94257.1 (hypothetical protein DLAC_04554 [Tieghemostelium lacteum])

HSP 1 Score: 139.0 bits (349), Expect = 1.900e-29
Identity = 79/188 (42.02%), Postives = 109/188 (57.98%), Query Frame = 0
Query:   55 YTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            Y+K   F N G +  +   KDL K+   +++ IDLNVTS   LTSLFL         ++     A ++N SSL AI+PF +WS+YC GKAARDM  Q +  E +   +          K+LNYAPGP++TDMQ ++RE  +    TR + +E    GKLV    SASK  + L E+T+ SGAH+DY+D
Sbjct:   91 YSKVLFFVNHGSLSYLEKIKDL-KNFNEIQKDIDLNVTSVTVLTSLFLRKISTYGENQI----EATLINTSSLCAIKPFDSWSVYCSGKAARDMLFQCIADEYKSNSK---------IKSLNYAPGPMDTDMQKQIRE-HTADESTRNYFIELKNSGKLVNANASASKLSNLLYENTFTSGAHIDYFD 263          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: KXS15536.1 (NAD(P)-binding protein [Gonapodya prolifera JEL478])

HSP 1 Score: 134.0 bits (336), Expect = 6.100e-28
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 0
Query:   50 PFSLP-----YTKAYLFNNAGLVGPIAYAKDLH-KDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFL--TEDTWE-SGAHVDYY 242
            P +LP     Y+ AYLF+NAG++GP++ A+DL       +  ++  +V +++ LTS FL  F           S+ V+VN+SSLAAIQPF TW +Y  GKAARD+F + V +E+       G RV    KTLNYAPGPL+T MQT +R S     P R   ++   +GKLV+ EDSA   +  L   +  WE +G HVDY+
Sbjct:  100 PSALPLPISSYSSAYLFHNAGMLGPLSRARDLSPSHTTDIATALSQDVAAYIALTSHFLTAF--------TDTSNVVIVNVSSLAAIQPFETWGVYGAGKAARDLFMRTVAEEE-------GPRV----KTLNYAPGPLDTAMQTHIRTSMPA-VPLRQVYVDMHTQGKLVKVEDSAEALLDVLGGIKGKWEGNGEHVDYF 280          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: XP_008120216.1 (PREDICTED: sepiapterin reductase [Anolis carolinensis])

HSP 1 Score: 130.2 bits (326), Expect = 8.900e-27
Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 0
Query:   65 GLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            G +G I+ +     D A +   +DLNVTS + LT+  L  F A P  +        VVNISSLAA+QPF +WS+YC GKAARDM  +V+ QE+               + L+YAPGPL+TDMQ E+R +KS  P  R   +E  +EGKL+  + SA K +  L  DT+ESGAH+D+YD
Sbjct:   12 GSLGDISKSFCELTDAAEVGAYLDLNVTSALCLTAGLLQAFPARPGLR------RTVVNISSLAALQPFKSWSLYCTGKAARDMMFRVLAQEEPD------------VRVLSYAPGPLDTDMQEEVR-TKSRDPKLRQIFLEMKEEGKLLDCDVSARKLLDLLLADTFESGAHIDFYD 170          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: XP_016605027.1 (sepiapterin reductase [Spizellomyces punctatus DAOM BR117] >KNC96987.1 sepiapterin reductase [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 130.2 bits (326), Expect = 8.900e-27
Identity = 77/205 (37.56%), Postives = 111/205 (54.15%), Query Frame = 0
Query:   38 EIFAAVRQPEGSPFSLPYTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            ++FA +  P     +  Y + YLFNNAG +G +   +  H+    +  ++ LN+T+ + LTS FL HF        P  +   ++NISSLAAIQ F  W +Y   KAARDM+ + +  E+               + LNYAPGPLNTDMQT +RE     P   +++ +   +GKLV P  SA   I  L +D +E+GAH+D YD
Sbjct:   81 DLFAKIPHP-----ATQYARVYLFNNAGSLGKLDRMR--HQTPDDISPAVHLNLTAPLALTSAFLRHF--------PNPTQIHIINISSLAAIQAFDCWGVYSATKAARDMYHKTIAVEE------------PNIRVLNYAPGPLNTDMQTRIREEMPDVPLREVYT-DMHAQGKLVEPTVSAKVLIGLLEKDEYENGAHIDIYD 257          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: GAX95497.1 (sepiapterin reductase [Pythium insidiosum])

HSP 1 Score: 130.2 bits (326), Expect = 8.900e-27
Identity = 74/188 (39.36%), Postives = 107/188 (56.91%), Query Frame = 0
Query:   55 YTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            Y + YL +NAG +G + Y  +     AA     + NVTS ++L   FL  FG   +     A S  +VNI+SL  I+PF T   YC  KAAR+M  +V+  E   +G  G +RV    + L+Y+PGP++TDMQ+ LRES  +HP       +   +G L+ PE S+ + +  +  D++ESGAHVDYYD
Sbjct:   93 YARIYLVHNAGSLGELGYPDEWTSSPAAYSAFWEFNVTSVMWLNKRFLDVFGLEHASSATTALS--IVNITSLCGIEPFRTHGWYCTSKAAREMHHRVLAAE--YDGSNGRRRV----RILSYSPGPMDTDMQSTLRESSRVHPEYVAMFNKLKADGTLLAPEASSRRGVRLVLSDSFESGAHVDYYD 272          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: GAY05456.1 (sepiapterin reductase [Pythium insidiosum])

HSP 1 Score: 129.8 bits (325), Expect = 1.200e-26
Identity = 74/188 (39.36%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   55 YTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            Y + YL +NAG +G + Y  +     AA     + NVTS ++L   FL  FG   +     A S  +VNI+SL  I+PF T   YC  KAAR+M  +V+  E   +G  G +RV    + L+Y+PGP++TDMQ+ LRES  +HP       +   +G L+ PE S+ + +  +  D +ESGAHVDYYD
Sbjct:   93 YARIYLVHNAGSLGELGYPDEWTSSPAAYSAFWEFNVTSVMWLNKRFLDVFGLEHASSATTALS--IVNITSLCGIEPFRTHGWYCTSKAAREMHHRVLAAE--YDGSNGRRRV----RILSYSPGPMDTDMQSTLRESSRVHPEYVAMFNKLKADGTLLAPEASSRRGVRLVLSDAFESGAHVDYYD 272          
BLAST of NO01G02590 vs. NCBI_GenBank
Match: XP_006676098.1 (hypothetical protein BATDEDRAFT_84986 [Batrachochytrium dendrobatidis JAM81] >EGF83437.1 hypothetical protein BATDEDRAFT_84986 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 129.4 bits (324), Expect = 1.500e-26
Identity = 79/208 (37.98%), Postives = 117/208 (56.25%), Query Frame = 0
Query:   53 LPYTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSLFLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFTQVVGQEQQ--QEGEGGGKRVTT----------------TFKTLNYAPGPLNTDMQTELRESKSIHPPTRMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYD 243
            L YT A LFNNAG +G ++  +D  + ++ +R+SID+N+ + + L++ FL  F           S  ++VN+SSLAAIQPF TW +Y   KAARDMF QV+  E+      E   KR T+                  + LNYAPGP++TDMQT +R ++      +   ++   +G+LV P DSAS  +  L  D + +G+H+DYYD
Sbjct:  104 LAYTTAVLFNNAGTLGTLSRIRD--QTISDMRKSIDVNLMAPLVLSAAFLKQFAD--------CSKLILVNVSSLAAIQPFDTWGVYSSIKAARDMFHQVIAVEEANIDAEEALSKRTTSPCSKDTQDTQAPLKSARVRVLNYAPGPMDTDMQTRIR-NEMPEIELKQAYVKMHDQGQLVDPNDSASVLMSLLESDDYINGSHIDYYD 300          
The following BLAST results are available for this feature:
BLAST of NO01G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29124.11.400e-6162.44sepiapterin reductase [Nannochloropsis gaditana][more]
OZJ05565.13.800e-3043.23hypothetical protein BZG36_01714 [Bifiguratus adel... [more]
EJK58975.11.500e-2941.38hypothetical protein THAOC_20865 [Thalassiosira oc... [more]
KYQ94257.11.900e-2942.02hypothetical protein DLAC_04554 [Tieghemostelium l... [more]
KXS15536.16.100e-2842.29NAD(P)-binding protein [Gonapodya prolifera JEL478... [more]
XP_008120216.18.900e-2744.38PREDICTED: sepiapterin reductase [Anolis carolinen... [more]
XP_016605027.18.900e-2737.56sepiapterin reductase [Spizellomyces punctatus DAO... [more]
GAX95497.18.900e-2739.36sepiapterin reductase [Pythium insidiosum][more]
GAY05456.11.200e-2639.36sepiapterin reductase [Pythium insidiosum][more]
XP_006676098.11.500e-2637.98hypothetical protein BATDEDRAFT_84986 [Batrachochy... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL002nonsL002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR086ngnoR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008103NSK008103Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02590.1NO01G02590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576701gene_250Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g61gene1460Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02590.1NO01G02590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02590 ID=NO01G02590|Name=NO01G02590|organism=Nannochloropsis oceanica|type=gene|length=814bp
ATGCTTAGCACTCGAAGCAGCCAGGACCTGGGGGCCGGCACTCGACATGC
ACCTGATCGCACGCAACAAGGAAGGCCTAGAGGCCACCAAGCAGGCTATC
GAGGGAATAATGAGAgtaagtgatggcccgcgtatatggacatggccaat
agacctgggagacctagactcattgccgctccaacttgcgcaagTTTTTG
CCGCCGTGCGGCAGCCGGAAGGGTCTCCTTTCTCGCTACCCTACACCAAG
GCGTATCTGTTCAACAACGCAGGTTTGGTGGGGCCGATTGCATATGCCAA
GGATCTCCATAAAGATCTCGCGGCGTTGCGCCAGTCTATAGACTTGAACG
TGACTTCCTTTGTCTACTTGACCTCGCTTTTCCTACACCACTTTGGTGCA
CCACCGAGTCAAAAATTACCATTCGCCTCGTCTGCTGTCGTTGTGAATAT
ATCTTCACTCGCAGCCATCCAACCATTCCATACCTGGAGCATATATTGCG
GAGGAAAGGCGGCGCGTGACATGTTCACTCAAGTCGTGGGGCAGGAGCAA
CAACAGGAGGGGGAGGGGGGTGGCAAGCGAGTAACCACCACTTTTAAAAC
CCTTAACTATGCGCCAGGCCCACTGAACACAGATATGCAGACAGAGCTCC
GAGAGAGTAAATCCATTCATCCACCGACGCGGATGTGGTCGATGGAGGCA
TTTAAAGAAGGCAAGCTGGTGCGGCCGGAAGACTCTGCGTCCAAGTGCAT
ACACTTTCTCACAGAGGACACCTGGGAAAGTGGGGCTCATGTTGATTACT
ATGACGATGTATAG
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protein sequence of NO01G02590.1

>NO01G02590.1-protein ID=NO01G02590.1-protein|Name=NO01G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bp
MLSTRSSQDLGAGTRHAPDRTQQGRPRGHQAGYRGNNEIFAAVRQPEGSP
FSLPYTKAYLFNNAGLVGPIAYAKDLHKDLAALRQSIDLNVTSFVYLTSL
FLHHFGAPPSQKLPFASSAVVVNISSLAAIQPFHTWSIYCGGKAARDMFT
QVVGQEQQQEGEGGGKRVTTTFKTLNYAPGPLNTDMQTELRESKSIHPPT
RMWSMEAFKEGKLVRPEDSASKCIHFLTEDTWESGAHVDYYDDV*
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Synonyms
Publications