NO01G02570, NO01G02570 (gene) Nannochloropsis oceanica

Overview
NameNO01G02570
Unique NameNO01G02570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1512
Alignment locationchr1:666758..668269 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:666758..668269 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO:0019205nucleobase-containing compound kinase activity
GO:0016740transferase activity
GO:0016301kinase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
GO:0006139nucleobase-containing compound metabolic process
Homology
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BLAST of NO01G02570 vs. NCBI_GenBank
Match: OQS03096.1 (adenylate kinase, partial [Thraustotheca clavata])

HSP 1 Score: 65.1 bits (157), Expect = 6.000e-7
Identity = 51/175 (29.14%), Postives = 80/175 (45.71%), Query Frame = 0 
Query:  217 LSSAEHEAQAPKARHSFAEMAEHRAALSRLVPLLINGITVIKHGRRGSPKLRLIFCNEDFSRIFWASDRINSHKRSNLSSLSISNVTEVREGTAPDPHHPGLFGTVTLRRRRASSLAVPAIVSCSGSNNSSTGELQPIPRAFSLIAAARSLDLEALTADDYTLLLEGFRSAVKLN 392
            + S + + Q P   +++         + R   +L++G  VIKHGRRG+P  R +F + +F R+FW        K    +S+++S+V EV +G            T   +R                S +SS G      R FSLIA  R+LD+EA + +   LL+ GF    +LN
Sbjct:  279 IKSIDLDFQTPLEDNNYKADTAKLVEMERFKTMLVSGFDVIKHGRRGAPHTRTLFADVEFKRLFWQKPDKKELKPKLDTSIALSDVIEVVQG----------MKTEVFKR----------------SGDSSKG-----GRYFSLIADDRTLDIEASSDEICALLVMGFTELTQLN 422
The following BLAST results are available for this feature:
BLAST of NO01G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
OQS03096.16.000e-729.14adenylate kinase, partial [Thraustotheca clavata][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL002nonsL002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR086ngnoR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02570.1NO01G02570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02570.1NO01G02570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02570 ID=NO01G02570|Name=NO01G02570|organism=Nannochloropsis oceanica|type=gene|length=1512bp
ATGCTACAGACAAGAAACAAAGGTATAGAGCTGATAAGGACCAGCGAGTG
CGGCGTCCCCGACCGACATGCCAGCAGCAAGCTAATGCCAAGAGATATCG
CGCGCCAGTCTGAGGGAGAAGACTGCATTAGCCTGGGCATTGTAGGCAAG
GAAGTGGTGGCTATCCCGGTCAGGGGCAACAGTTGCAGAAGGCTGATCAG
CTCCGGTGGTCCTTGTTCCGTTTCATGTGTGTCCGGACGGGCGTACACAG
TTTATCTAGTTCAGGTGCGGCACAAAGGCCAGGATTACATTATACGCCGT
CGATTCCGCGAATTCTCTGCCCTCAACGATTGTATCAAGGACGAAGATTT
ACGAGCAATATTTCCTCCCCGCTCTCTGTTCGCCAAAGgtacattacagt
gaatgcttgagctaaattttggtcatccattggtctgcttgcttatgcta
acaccgctccactgcttcattcccacctcaacattacagCCGGTCTCGCC
TGCGCGCTAGAAACACGCCAGAGTCGCTTGGCTTATTACATTAAAGAGCT
TGCTCACAAGCTATCTGGGGAACCATGCAAGGACAAGATTCTCACCTTCC
TTCGAGCCACGGACCTGTGTACCCTTGAGCAGGACGCAGCTGCTCGCCCG
TCCTTCTCGCACTATGACGAAAAGGGAGAGCGGGAATCCTCGGAGATGCG
GCCAGCGATAGCGGCAAGTACTCAAACAATAGGACTGTCTATGATACGGC
TATCATCAGCGGAGCATGAGGCACAGGCGCCCAAGGCACGACATTCTTTT
GCGGAGATGGCCGAGCACCGGGCAGCATTGTCGCGTCTTGTCCCTCTTCT
GATCAATGGCATCACGGTGATCAAGgtaagtttcaggctagctcctaatt
gagtatacctctgccgtatttggcccctcttttctgtattttttgcccgc
attgttcgcctcgctgaatcgtcagtctcttttctcgtcaatgtctctca
caccacctaactatcaacatcacaaacagCACGGCCGTCGTGGCTCCCCC
AAGCTCCGCCTTATCTTCTGCAACGAGGATTTTTCGCGAATTTTCTGGGC
TTCCGACAGGATCAACAGTCATAAACGCTCCAATCTCTCCTCCCTATCCA
TTTCCAACGTGACAGAGGTGCGAGAAGGGACGGCACCTGATCCCCATCAC
CCCGGCCTCTTCGGCACAGTCACCCTCCGTCGACGTCGTGCCTCCTCCCT
GGCAGTACCTGCAATCGTTAGTTGCAGTGGTAGCAACAACAGCAGCACCG
GAGAATTACAACCGATACCGCGGGCCTTTTCTCTCATCGCGGCTGCTCGT
TCCTTGGACCTTGAGGCACTGACTGCTGATGACTATACTCTCTTGCTGGA
GGGGTTCCGTTCCGCGGTAAAACTCAACATGGCTGCGACCTCAACAGCAG
CAACAGCGGCAGAAACGGAAGTTGATGTGAGGGGAAACAAGGCAGTTCCA
GCATTCGGCTAG
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protein sequence of NO01G02570.1

>NO01G02570.1-protein ID=NO01G02570.1-protein|Name=NO01G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MLQTRNKGIELIRTSECGVPDRHASSKLMPRDIARQSEGEDCISLGIVGK
EVVAIPVRGNSCRRLISSGGPCSVSCVSGRAYTVYLVQVRHKGQDYIIRR
RFREFSALNDCIKDEDLRAIFPPRSLFAKAGLACALETRQSRLAYYIKEL
AHKLSGEPCKDKILTFLRATDLCTLEQDAAARPSFSHYDEKGERESSEMR
PAIAASTQTIGLSMIRLSSAEHEAQAPKARHSFAEMAEHRAALSRLVPLL
INGITVIKHGRRGSPKLRLIFCNEDFSRIFWASDRINSHKRSNLSSLSIS
NVTEVREGTAPDPHHPGLFGTVTLRRRRASSLAVPAIVSCSGSNNSSTGE
LQPIPRAFSLIAAARSLDLEALTADDYTLLLEGFRSAVKLNMAATSTAAT
AAETEVDVRGNKAVPAFG*
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Synonyms
Publications