NO01G02530, NO01G02530 (gene) Nannochloropsis oceanica

Overview
NameNO01G02530
Unique NameNO01G02530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1161
Alignment locationchr1:660311..661471 -

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Properties
Property NameValue
DescriptionZinc finger (C3hc4-type ring finger) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:660311..661471 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_domain
IPR001841Znf_RING
IPR003111Pept_S16_N
Homology
BLAST of NO01G02530 vs. NCBI_GenBank
Match: EWM29151.1 (zinc finger (c3hc4-type ring finger) family protein [Nannochloropsis gaditana])

HSP 1 Score: 527.7 bits (1358), Expect = 3.000e-146
Identity = 261/311 (83.92%), Postives = 280/311 (90.03%), Query Frame = 0
Query:   73 RPLTPTYFDAVTAPVGTGTLTLGDLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRG 384
            RPLTPT+FDAV +P     LTLGDLECGVCL LLCEAVTTPCGHSLCRLCLV+ALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFP LYEQRLEETRQEREA+KLLLPIFFYNLPIFPGE LRLHLFEPRYRLMMQRIV+GSRRFAYVPNYSNYR    D+ALIAE+KEVRFMRDGRSELEARI GR+TI E PYVE+GTGGLSYCRL ELRD +P S+EA +AL + S KARE+AHA+F ERRDIKAVVVDRYG+MPGP TPEALSLWIAAVLPTENRQ KH LLV TDT +RL  C++KLQALRG
Sbjct:   70 RPLTPTFFDAVASPARGEMLTLGDLECGVCLGLLCEAVTTPCGHSLCRLCLVRALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPALYEQRLEETRQEREALKLLLPIFFYNLPIFPGEALRLHLFEPRYRLMMQRIVNGSRRFAYVPNYSNYRAKAGDIALIAELKEVRFMRDGRSELEARIAGRFTIAEDPYVEDGTGGLSYCRLKELRDESPKSAEASQALRQASEKAREMAHAIFLERRDIKAVVVDRYGEMPGPQTPEALSLWIAAVLPTENRQIKHDLLVSTDTSHRLEVCISKLQALRG 380          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: CEL94050.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 161.4 bits (407), Expect = 5.700e-36
Identity = 101/267 (37.83%), Postives = 152/267 (56.93%), Query Frame = 0
Query:   97 LECGVCLSLLCEAVTTPCGHSLCRLCLVQALQ-RQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPI-LYEQRLEETRQEREAMKLLLPIFFYNLPI-FPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVP---NYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSE-AG--EALMKVSAKAREIAHAL-FYERRDIKAVVVDRYG---DMPGPHTPEALSLWIAAVL 351
            LEC +CL ++C+ +  PCGH+ CR CLV +++  + KCP CRAVC+I+    +E R+L  LA+    +  Y +RLEE  ++ + +   LP+FFYN P   PG +L LH FEPRYRLMM+RI +  RRF Y+P   + SN      ++ L+AE+ +   + DGR  + AR+  R   V+S +VE+GT GLSYC + E+ D      + AG  EA  +V  K  E    L    R+++   V    G     P     E++S W+++ +
Sbjct:   26 LECSICLQVVCQPICVPCGHTFCRSCLVSSMKVSRKKCPSCRAVCLIDPVQSSECRMLADLARAVLGVAAYTERLEEATRQLQEIDQTLPVFFYNDPANLPGCLLALHFFEPRYRLMMERITEAHRRFLYLPLRRHTSNTSDLIGEIGLVAELIDSLRLPDGRWHIRARL-RRRVRVQSHWVEDGTLGLSYCTVKEVVDTPVEDGQLAGLVEAARRVKEKVVEGLDRLDAATRQELTESVGSEPGLSASYPSVQALESMSFWLSSCI 291          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: CBN78456.1 (kinase, putative [Ectocarpus siliculosus])

HSP 1 Score: 154.8 bits (390), Expect = 5.300e-34
Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 0
Query:   88 GTGTLTLGDLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQR-QTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRR 221
            GT TL L  LEC VCL L+CE V+  CGHS CR+CLV  L+R + KCP CRAVC  +AED  E  +L  +A+  FP L   RL+E   ERE    +LP+F+YN+P+FPGE L+LHLFEPRY+LMM+R+V+ SRR
Sbjct:   28 GTATLPLAALECAVCLFLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIARTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 161          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_005839531.1 (hypothetical protein GUITHDRAFT_101718 [Guillardia theta CCMP2712] >EKX52551.1 hypothetical protein GUITHDRAFT_101718 [Guillardia theta CCMP2712])

HSP 1 Score: 151.4 bits (381), Expect = 5.900e-33
Identity = 90/273 (32.97%), Postives = 147/273 (53.85%), Query Frame = 0
Query:  147 HAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMK------------------------VSAKAREIAHALFYERRDIKAVVVDRYGDM---------PGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRGEAA 387
            HAE   +  + +  FP  Y+ R++E + ER A + +LPIFFYN  ++P   L LHLFEPRY++M++RIV  SR+FAY+P   +Y+ +  DV +IAE+ EV F+ DGR+ ++A+   R+ I+++ +VE+GT GL +C++  + D  P  S A   + +                        V A++ +       E   +   +++ +G+M         P P  PE LS W+A++LP    Q KH LL    T+ RLN  L+ ++  + + A
Sbjct:    2 HAENITIVNILRNCFPDQYQARIDELQHERNAWENILPIFFYNDTLYPYSPLVLHLFEPRYKIMIKRIVQASRKFAYLPCMHSYQASVGDVGVIAELSEVEFLPDGRAHVQAKCRDRFRILDT-WVEDGTQGLHWCKVEIIHD-EPVESHADVQVSQXXXXXXXXXXXXXXXXXXXXXXXXVQAQSTQSLEECARECSQMFEAMMENFGNMRSDIDVAHGPKPENPEKLSFWLASILPVPYHQ-KHNLLTSRSTMERLNELLSIIRMHQDQRA 271          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: CBN75903.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 146.7 bits (369), Expect = 1.400e-31
Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 0
Query:  152 LLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDD--------VALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCL 376
            +L ++AK  FP L E+RL ET  E+   +L LP FFYN+P+FPG+ L +H FEPRY+LMMQRI++ SRRFAYV          DD        +AL A V E  F+ D R  ++ ++ GR+T+VE  +VE GTG L YC+L E  D  P      + L  +  +A+ + +         K  +V+ +G M  P     LS+W+A++LP     +KH+L+    T  R+ TCL
Sbjct:    1 MLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYNVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVQSTNNDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVED-FVEAGTGDLHYCQL-EPFDDDPLQDGGADELEDLHTRAKTMCNGFL---GPFKGQLVEAHGRM--PEDAVGLSMWMASLLPF-YPPDKHSLVRSRCTRRRMRTCL 224          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_009338840.2 (PREDICTED: probable receptor-like protein kinase At5g61350 [Pyrus x bretschneideri])

HSP 1 Score: 139.0 bits (349), Expect = 3.000e-29
Identity = 101/294 (34.35%), Postives = 147/294 (50.00%), Query Frame = 0
Query:   96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDR---------YGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQA 381
            D +C +CL LL E VTTPCGHS CR CL Q++ R  KCP+CR V  I+    A +  L  + ++ FP  + +R  E  Q       L+P+F  ++ + P + + LH+FEPRYRLM++RI++G+RR   V   S+  G+  D A   E+ E   + DGR  LE     R+ I+ S        G     +  ++D+ P  SEA E L +++  A E A +  +  R  +A   DR            MP    PE  S W+A+ L      E+  LL   DT  R++     LQA
Sbjct:  196 DFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISPRTCAISVTLNDIIQKNFPEEFSERKLENDQMTNFGVDLMPLFVMDV-VLPFQKISLHIFEPRYRLMVRRIMEGNRRMGMVIIDSS-TGSIADFACEVEITECEPLPDGRFYLEIESRRRFRIIRS----WDQDGYRVAEIEWVQDILPEGSEAREELQELARNAAEYARS--WIARGKRAARQDRRRLEKLLGVEAMMPSLQDPERFSFWLAS-LSNRRPHERLDLLRLRDTKERIHRGHMYLQA 480          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: ACF86768.1 (unknown [Zea mays])

HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29
Identity = 95/291 (32.65%), Postives = 144/291 (49.48%), Query Frame = 0
Query:   94 LGDLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV-APASSEAGEALMKVSAKAREIAHALFYERRD-IKAVVVDRYGD---MPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQ 380
            + D EC +C  LL E VTTPCGHS CR CL Q++    KCP+CR V  I       +  L+ + +R FP  Y +R  E      A   L+P+F  ++ + P + + L++FEPRYRLM++RI++G+ R   V    +  G   D     E+ E   + DGR  LE     R+ IV S        G     +  L+D+  P  S+    LM+++  A E+A A     RD ++     R+ D   MPGP  PE  S W+A ++          L +  DT  R+++ ++ L+
Sbjct:  187 IDDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPRTCPISVTLSNIIQRNFPEEYAERRSEHETMTYAGVDLMPLFVMDV-VLPSQKMALNIFEPRYRLMVRRIMEGNHRMGMVA-IDSATGTVADCGCEVEISECEPLPDGRFYLEVEGTRRFRIVRS----WDQDGYRVAEVEWLKDIPLPEGSQGRRELMELANGASELARAYIRHARDTVRTARRTRHLDLEGMPGPQDPEKFSFWLANLISLRPSDRLDTLRL-RDTRERISSSISLLR 470          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_024395894.1 (LON peptidase N-terminal domain and RING finger protein 1-like [Physcomitrella patens] >XP_024395895.1 LON peptidase N-terminal domain and RING finger protein 1-like [Physcomitrella patens] >PNR39476.1 hypothetical protein PHYPA_019754 [Physcomitrella patens])

HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29
Identity = 95/298 (31.88%), Postives = 154/298 (51.68%), Query Frame = 0
Query:   96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVA-PASSEAGEALMKVSAKAREIAHALFYERRDIKA-------VVVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRGEA 386
            DL+C +CL LL + +TTPCGHS CR CL+QAL    KCP+CR V  ++ + +  +  L  L +R FP  + +R  E      A    LP+F  ++ + P + L L++FEPRYRLM++R+V+G+ R   V    +  G+  +VA   E+ E   + DGR E+E  +VG+     +   E+   G    ++  L+DV  P  S   + L +    A ++ +A     RDI          +++R   MP    PE  S W+A ++    R+    L + TDT  RL   + +L+++  ++
Sbjct:  186 DLDCTLCLKLLHQPITTPCGHSFCRACLLQALDHGNKCPMCRTVIFVSPKTYPVSVTLNNLIQRNFPEEFAERKAEMDAVSLAGGETLPLFVMDV-VLPMQQLMLNIFEPRYRLMIRRVVEGNHRMGMVRIEES--GSLAEVACEVEITECEPLPDGRFEIE--VVGKRRFRMTETWEQ--DGYRVAKVQWLQDVVHPDGSPEKDELAQSVRTAADLVNAFISRVRDIAVRSDRRLLEMLNRTEGMPSASDPERFSFWVANLMNIPGRERLQYLRI-TDTRERLTREITRLRSMPADS 475          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_020277272.1 (LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277273.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277274.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277276.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277277.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >ONK60037.1 uncharacterized protein A4U43_C08F13540 [Asparagus officinalis])

HSP 1 Score: 138.3 bits (347), Expect = 5.100e-29
Identity = 97/292 (33.22%), Postives = 144/292 (49.32%), Query Frame = 0
Query:   96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV-APASSEAGEALMKVSAKAREIAHALFYERRDIKAV------VVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQA 381
            D EC +CL LL E VTTPCGHS CR CL+QAL    +CP+CR V  I+   +  +  L  + ++ FP  Y +R  E          L+P+F  ++ + P + L L++FEPRYRLM++RI++G+ R   V    +  G+  DVA   E+ E   + DGR  LE     R+ I+ES        G    ++  + D+  P  S   E L ++   A E+A       R+   +      +  +   MPGP  PE  S W+  +L    RQ +  LL   DT  R+   +  L+A
Sbjct:  193 DFECTLCLKLLYEPVTTPCGHSFCRACLLQALDHGNRCPMCRTVLFISPRTYPVSVTLNNIIQKNFPDEYAERKSENESLTHLGINLMPLFVMDV-VLPCQKLSLNIFEPRYRLMVRRIMEGNHRMGMV-ILDSMTGSIADVACEVEIVECEALPDGRFYLEVEGRRRFRILES----WDQDGYRVAKIEWIEDIQPPEGSPEREDLQQLVIAAAELARTSITNAREAARMGRRSRHMELQAEGMPGPQYPEKFSFWLVNLLNLRPRQ-RLELLRLRDTRERITYSIGFLRA 477          
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_020277278.1 (LON peptidase N-terminal domain and RING finger protein 1 isoform X2 [Asparagus officinalis])

HSP 1 Score: 138.3 bits (347), Expect = 5.100e-29
Identity = 97/292 (33.22%), Postives = 144/292 (49.32%), Query Frame = 0
Query:   96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV-APASSEAGEALMKVSAKAREIAHALFYERRDIKAV------VVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQA 381
            D EC +CL LL E VTTPCGHS CR CL+QAL    +CP+CR V  I+   +  +  L  + ++ FP  Y +R  E          L+P+F  ++ + P + L L++FEPRYRLM++RI++G+ R   V    +  G+  DVA   E+ E   + DGR  LE     R+ I+ES        G    ++  + D+  P  S   E L ++   A E+A       R+   +      +  +   MPGP  PE  S W+  +L    RQ +  LL   DT  R+   +  L+A
Sbjct:  108 DFECTLCLKLLYEPVTTPCGHSFCRACLLQALDHGNRCPMCRTVLFISPRTYPVSVTLNNIIQKNFPDEYAERKSENESLTHLGINLMPLFVMDV-VLPCQKLSLNIFEPRYRLMVRRIMEGNHRMGMV-ILDSMTGSIADVACEVEIVECEALPDGRFYLEVEGRRRFRILES----WDQDGYRVAKIEWIEDIQPPEGSPEREDLQQLVIAAAELARTSITNAREAARMGRRSRHMELQAEGMPGPQYPEKFSFWLVNLLNLRPRQ-RLELLRLRDTRERITYSIGFLRA 392          
The following BLAST results are available for this feature:
BLAST of NO01G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29151.13.000e-14683.92zinc finger (c3hc4-type ring finger) family protei... [more]
CEL94050.15.700e-3637.83unnamed protein product [Vitrella brassicaformis C... [more]
CBN78456.15.300e-3456.72kinase, putative [Ectocarpus siliculosus][more]
XP_005839531.15.900e-3332.97hypothetical protein GUITHDRAFT_101718 [Guillardia... [more]
CBN75903.11.400e-3139.22conserved unknown protein [Ectocarpus siliculosus][more]
XP_009338840.23.000e-2934.35PREDICTED: probable receptor-like protein kinase A... [more]
ACF86768.13.900e-2932.65unknown [Zea mays][more]
XP_024395894.13.900e-2931.88LON peptidase N-terminal domain and RING finger pr... [more]
XP_020277272.15.100e-2933.22LON peptidase N-terminal domain and RING finger pr... [more]
XP_020277278.15.100e-2933.22LON peptidase N-terminal domain and RING finger pr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL002nonsL002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR086ngnoR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008094NSK008094Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02530.1NO01G02530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576677gene_243Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g69gene1456Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02530.1NO01G02530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02530 ID=NO01G02530|Name=NO01G02530|organism=Nannochloropsis oceanica|type=gene|length=1161bp
ATGGTACAAACACGCAGCTCACCTGGCCACTCGATTCCGGCGCCAGACGC
CACCGCAGTCGCCGGTGCTGCTGCCGCCACGACAGAGGGCGAGGACCACG
GTAATAGCAGCAGCGCTAGCACCGAAAAAACTACTCCTAACAGACATGAT
ATCAGTACTAGCAGCGGCGGCGGCAGTAGTAGCTCAAGCTGTGGCAGCAG
TGAAGGTCTGTCACCTCGCCCCCTTACACCGACATACTTTGATGCGGTGA
CGGCGCCTGTGGGGACCGGGACACTGACGCTAGGTGATCTGGAGTGCGGC
GTCTGTCTAAGCTTGTTGTGTGAAGCTGTTACAACGCCATGCGGTCACAG
TCTCTGCCGACTCTGTTTGGTTCAGGCATTGCAACGACAAACCAAGTGCC
CGGTCTGTCGAGCTGTTTGCATGATCAACGCGGAGGACCACGCCGAGACC
CGCCTTTTGACCCGCCTAGCCAAACGAGCCTTTCCTATCCTGTACGAGCA
ACGCTTGGAGGAAACGCGCCAAGAACGAGAAGCGATGAAGCTGTTGTTGC
CCATCTTCTTTTACAATCTTCCTATTTTTCCTGGGGAGGTTTTGCGTTTA
CACTTGTTCGAGCCTCGTTACCGCTTGATGATGCAGCGCATTGTGGACGG
TAGCCGACGGTTTGCTTACGTACCTAATTACTCTAATTATCGCGGCGCAA
AAGATGACGTGGCTCTTATAGCTGAAGTAAAGGAAGTACGGTTCATGCGC
GACGGACGAAGTGAGCTCGAGGCTCGAATCGTGGGTCGCTACACCATTGT
CGAAAGTCCTTACGTAGAGGAAGGGACCGGGGGATTGAGCTATTGTCGGC
TGGCAGAGCTTCGTGATGTGGCCCCAGCCTCATCGGAGGCTGGAGAGGCT
TTGATGAAAGTTAGCGCCAAGGCACGAGAGATTGCACATGCGCTGTTTTA
TGAGAGGAGGGACATAAAAGCAGTGGTTGTGGATAGGTACGGGGATATGC
CTGGCCCGCACACACCTGAAGCGCTTTCGCTTTGGATCGCTGCAGTTTTG
CCCACAGAAAATCGGCAGGAGAAGCATGCGTTGCTCGTATGTACGGATAC
ACTGTACCGCCTCAACACGTGCTTGGCCAAGTTGCAGGCGTTGCGGGGTG
AGGCTGCTTAA
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protein sequence of NO01G02530.1

>NO01G02530.1-protein ID=NO01G02530.1-protein|Name=NO01G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=387bp
MVQTRSSPGHSIPAPDATAVAGAAAATTEGEDHGNSSSASTEKTTPNRHD
ISTSSGGGSSSSSCGSSEGLSPRPLTPTYFDAVTAPVGTGTLTLGDLECG
VCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAET
RLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRL
HLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMR
DGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEA
LMKVSAKAREIAHALFYERRDIKAVVVDRYGDMPGPHTPEALSLWIAAVL
PTENRQEKHALLVCTDTLYRLNTCLAKLQALRGEAA*
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Synonyms
Publications