NO01G02530, NO01G02530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02530 vs. NCBI_GenBank
Match: EWM29151.1 (zinc finger (c3hc4-type ring finger) family protein [Nannochloropsis gaditana]) HSP 1 Score: 527.7 bits (1358), Expect = 3.000e-146 Identity = 261/311 (83.92%), Postives = 280/311 (90.03%), Query Frame = 0 Query: 73 RPLTPTYFDAVTAPVGTGTLTLGDLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRG 384 RPLTPT+FDAV +P LTLGDLECGVCL LLCEAVTTPCGHSLCRLCLV+ALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFP LYEQRLEETRQEREA+KLLLPIFFYNLPIFPGE LRLHLFEPRYRLMMQRIV+GSRRFAYVPNYSNYR D+ALIAE+KEVRFMRDGRSELEARI GR+TI E PYVE+GTGGLSYCRL ELRD +P S+EA +AL + S KARE+AHA+F ERRDIKAVVVDRYG+MPGP TPEALSLWIAAVLPTENRQ KH LLV TDT +RL C++KLQALRG Sbjct: 70 RPLTPTFFDAVASPARGEMLTLGDLECGVCLGLLCEAVTTPCGHSLCRLCLVRALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPALYEQRLEETRQEREALKLLLPIFFYNLPIFPGEALRLHLFEPRYRLMMQRIVNGSRRFAYVPNYSNYRAKAGDIALIAELKEVRFMRDGRSELEARIAGRFTIAEDPYVEDGTGGLSYCRLKELRDESPKSAEASQALRQASEKAREMAHAIFLERRDIKAVVVDRYGEMPGPQTPEALSLWIAAVLPTENRQIKHDLLVSTDTSHRLEVCISKLQALRG 380
BLAST of NO01G02530 vs. NCBI_GenBank
Match: CEL94050.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 161.4 bits (407), Expect = 5.700e-36 Identity = 101/267 (37.83%), Postives = 152/267 (56.93%), Query Frame = 0 Query: 97 LECGVCLSLLCEAVTTPCGHSLCRLCLVQALQ-RQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPI-LYEQRLEETRQEREAMKLLLPIFFYNLPI-FPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVP---NYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSE-AG--EALMKVSAKAREIAHAL-FYERRDIKAVVVDRYG---DMPGPHTPEALSLWIAAVL 351 LEC +CL ++C+ + PCGH+ CR CLV +++ + KCP CRAVC+I+ +E R+L LA+ + Y +RLEE ++ + + LP+FFYN P PG +L LH FEPRYRLMM+RI + RRF Y+P + SN ++ L+AE+ + + DGR + AR+ R V+S +VE+GT GLSYC + E+ D + AG EA +V K E L R+++ V G P E++S W+++ + Sbjct: 26 LECSICLQVVCQPICVPCGHTFCRSCLVSSMKVSRKKCPSCRAVCLIDPVQSSECRMLADLARAVLGVAAYTERLEEATRQLQEIDQTLPVFFYNDPANLPGCLLALHFFEPRYRLMMERITEAHRRFLYLPLRRHTSNTSDLIGEIGLVAELIDSLRLPDGRWHIRARL-RRRVRVQSHWVEDGTLGLSYCTVKEVVDTPVEDGQLAGLVEAARRVKEKVVEGLDRLDAATRQELTESVGSEPGLSASYPSVQALESMSFWLSSCI 291
BLAST of NO01G02530 vs. NCBI_GenBank
Match: CBN78456.1 (kinase, putative [Ectocarpus siliculosus]) HSP 1 Score: 154.8 bits (390), Expect = 5.300e-34 Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 0 Query: 88 GTGTLTLGDLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQR-QTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRR 221 GT TL L LEC VCL L+CE V+ CGHS CR+CLV L+R + KCP CRAVC +AED E +L +A+ FP L RL+E ERE +LP+F+YN+P+FPGE L+LHLFEPRY+LMM+R+V+ SRR Sbjct: 28 GTATLPLAALECAVCLFLVCEPVSLSCGHSFCRVCLVNTLRRNKKKCPTCRAVCHNSAEDQPEDVMLANIARTCFPELAAARLKEVEAEREKFMTVLPVFYYNVPMFPGESLQLHLFEPRYKLMMKRVVNTSRR 161
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_005839531.1 (hypothetical protein GUITHDRAFT_101718 [Guillardia theta CCMP2712] >EKX52551.1 hypothetical protein GUITHDRAFT_101718 [Guillardia theta CCMP2712]) HSP 1 Score: 151.4 bits (381), Expect = 5.900e-33 Identity = 90/273 (32.97%), Postives = 147/273 (53.85%), Query Frame = 0 Query: 147 HAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMK------------------------VSAKAREIAHALFYERRDIKAVVVDRYGDM---------PGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRGEAA 387 HAE + + + FP Y+ R++E + ER A + +LPIFFYN ++P L LHLFEPRY++M++RIV SR+FAY+P +Y+ + DV +IAE+ EV F+ DGR+ ++A+ R+ I+++ +VE+GT GL +C++ + D P S A + + V A++ + E + +++ +G+M P P PE LS W+A++LP Q KH LL T+ RLN L+ ++ + + A Sbjct: 2 HAENITIVNILRNCFPDQYQARIDELQHERNAWENILPIFFYNDTLYPYSPLVLHLFEPRYKIMIKRIVQASRKFAYLPCMHSYQASVGDVGVIAELSEVEFLPDGRAHVQAKCRDRFRILDT-WVEDGTQGLHWCKVEIIHD-EPVESHADVQVSQXXXXXXXXXXXXXXXXXXXXXXXXVQAQSTQSLEECARECSQMFEAMMENFGNMRSDIDVAHGPKPENPEKLSFWLASILPVPYHQ-KHNLLTSRSTMERLNELLSIIRMHQDQRA 271
BLAST of NO01G02530 vs. NCBI_GenBank
Match: CBN75903.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.7 bits (369), Expect = 1.400e-31 Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 0 Query: 152 LLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDD--------VALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCL 376 +L ++AK FP L E+RL ET E+ +L LP FFYN+P+FPG+ L +H FEPRY+LMMQRI++ SRRFAYV DD +AL A V E F+ D R ++ ++ GR+T+VE +VE GTG L YC+L E D P + L + +A+ + + K +V+ +G M P LS+W+A++LP +KH+L+ T R+ TCL Sbjct: 1 MLAQIAKSLFPELLERRLRETEAEKAKFELCLPAFFYNVPVFPGQTLCVHFFEPRYKLMMQRIINTSRRFAYVLPAPVQSTNNDDRNTDQQGRIALEAHVCEAEFLSDDRVMVKIKLAGRHTVVED-FVEAGTGDLHYCQL-EPFDDDPLQDGGADELEDLHTRAKTMCNGFL---GPFKGQLVEAHGRM--PEDAVGLSMWMASLLPF-YPPDKHSLVRSRCTRRRMRTCL 224
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_009338840.2 (PREDICTED: probable receptor-like protein kinase At5g61350 [Pyrus x bretschneideri]) HSP 1 Score: 139.0 bits (349), Expect = 3.000e-29 Identity = 101/294 (34.35%), Postives = 147/294 (50.00%), Query Frame = 0 Query: 96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVAPASSEAGEALMKVSAKAREIAHALFYERRDIKAVVVDR---------YGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQA 381 D +C +CL LL E VTTPCGHS CR CL Q++ R KCP+CR V I+ A + L + ++ FP + +R E Q L+P+F ++ + P + + LH+FEPRYRLM++RI++G+RR V S+ G+ D A E+ E + DGR LE R+ I+ S G + ++D+ P SEA E L +++ A E A + + R +A DR MP PE S W+A+ L E+ LL DT R++ LQA Sbjct: 196 DFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISPRTCAISVTLNDIIQKNFPEEFSERKLENDQMTNFGVDLMPLFVMDV-VLPFQKISLHIFEPRYRLMVRRIMEGNRRMGMVIIDSS-TGSIADFACEVEITECEPLPDGRFYLEIESRRRFRIIRS----WDQDGYRVAEIEWVQDILPEGSEAREELQELARNAAEYARS--WIARGKRAARQDRRRLEKLLGVEAMMPSLQDPERFSFWLAS-LSNRRPHERLDLLRLRDTKERIHRGHMYLQA 480
BLAST of NO01G02530 vs. NCBI_GenBank
Match: ACF86768.1 (unknown [Zea mays]) HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29 Identity = 95/291 (32.65%), Postives = 144/291 (49.48%), Query Frame = 0 Query: 94 LGDLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV-APASSEAGEALMKVSAKAREIAHALFYERRD-IKAVVVDRYGD---MPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQ 380 + D EC +C LL E VTTPCGHS CR CL Q++ KCP+CR V I + L+ + +R FP Y +R E A L+P+F ++ + P + + L++FEPRYRLM++RI++G+ R V + G D E+ E + DGR LE R+ IV S G + L+D+ P S+ LM+++ A E+A A RD ++ R+ D MPGP PE S W+A ++ L + DT R+++ ++ L+ Sbjct: 187 IDDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPRTCPISVTLSNIIQRNFPEEYAERRSEHETMTYAGVDLMPLFVMDV-VLPSQKMALNIFEPRYRLMVRRIMEGNHRMGMVA-IDSATGTVADCGCEVEISECEPLPDGRFYLEVEGTRRFRIVRS----WDQDGYRVAEVEWLKDIPLPEGSQGRRELMELANGASELARAYIRHARDTVRTARRTRHLDLEGMPGPQDPEKFSFWLANLISLRPSDRLDTLRL-RDTRERISSSISLLR 470
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_024395894.1 (LON peptidase N-terminal domain and RING finger protein 1-like [Physcomitrella patens] >XP_024395895.1 LON peptidase N-terminal domain and RING finger protein 1-like [Physcomitrella patens] >PNR39476.1 hypothetical protein PHYPA_019754 [Physcomitrella patens]) HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29 Identity = 95/298 (31.88%), Postives = 154/298 (51.68%), Query Frame = 0 Query: 96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDVA-PASSEAGEALMKVSAKAREIAHALFYERRDIKA-------VVVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQALRGEA 386 DL+C +CL LL + +TTPCGHS CR CL+QAL KCP+CR V ++ + + + L L +R FP + +R E A LP+F ++ + P + L L++FEPRYRLM++R+V+G+ R V + G+ +VA E+ E + DGR E+E +VG+ + E+ G ++ L+DV P S + L + A ++ +A RDI +++R MP PE S W+A ++ R+ L + TDT RL + +L+++ ++ Sbjct: 186 DLDCTLCLKLLHQPITTPCGHSFCRACLLQALDHGNKCPMCRTVIFVSPKTYPVSVTLNNLIQRNFPEEFAERKAEMDAVSLAGGETLPLFVMDV-VLPMQQLMLNIFEPRYRLMIRRVVEGNHRMGMVRIEES--GSLAEVACEVEITECEPLPDGRFEIE--VVGKRRFRMTETWEQ--DGYRVAKVQWLQDVVHPDGSPEKDELAQSVRTAADLVNAFISRVRDIAVRSDRRLLEMLNRTEGMPSASDPERFSFWVANLMNIPGRERLQYLRI-TDTRERLTREITRLRSMPADS 475
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_020277272.1 (LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277273.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277274.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277276.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >XP_020277277.1 LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Asparagus officinalis] >ONK60037.1 uncharacterized protein A4U43_C08F13540 [Asparagus officinalis]) HSP 1 Score: 138.3 bits (347), Expect = 5.100e-29 Identity = 97/292 (33.22%), Postives = 144/292 (49.32%), Query Frame = 0 Query: 96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV-APASSEAGEALMKVSAKAREIAHALFYERRDIKAV------VVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQA 381 D EC +CL LL E VTTPCGHS CR CL+QAL +CP+CR V I+ + + L + ++ FP Y +R E L+P+F ++ + P + L L++FEPRYRLM++RI++G+ R V + G+ DVA E+ E + DGR LE R+ I+ES G ++ + D+ P S E L ++ A E+A R+ + + + MPGP PE S W+ +L RQ + LL DT R+ + L+A Sbjct: 193 DFECTLCLKLLYEPVTTPCGHSFCRACLLQALDHGNRCPMCRTVLFISPRTYPVSVTLNNIIQKNFPDEYAERKSENESLTHLGINLMPLFVMDV-VLPCQKLSLNIFEPRYRLMVRRIMEGNHRMGMV-ILDSMTGSIADVACEVEIVECEALPDGRFYLEVEGRRRFRILES----WDQDGYRVAKIEWIEDIQPPEGSPEREDLQQLVIAAAELARTSITNAREAARMGRRSRHMELQAEGMPGPQYPEKFSFWLVNLLNLRPRQ-RLELLRLRDTRERITYSIGFLRA 477
BLAST of NO01G02530 vs. NCBI_GenBank
Match: XP_020277278.1 (LON peptidase N-terminal domain and RING finger protein 1 isoform X2 [Asparagus officinalis]) HSP 1 Score: 138.3 bits (347), Expect = 5.100e-29 Identity = 97/292 (33.22%), Postives = 144/292 (49.32%), Query Frame = 0 Query: 96 DLECGVCLSLLCEAVTTPCGHSLCRLCLVQALQRQTKCPVCRAVCMINAEDHAETRLLTRLAKRAFPILYEQRLEETRQEREAMKLLLPIFFYNLPIFPGEVLRLHLFEPRYRLMMQRIVDGSRRFAYVPNYSNYRGAKDDVALIAEVKEVRFMRDGRSELEARIVGRYTIVESPYVEEGTGGLSYCRLAELRDV-APASSEAGEALMKVSAKAREIAHALFYERRDIKAV------VVDRYGDMPGPHTPEALSLWIAAVLPTENRQEKHALLVCTDTLYRLNTCLAKLQA 381 D EC +CL LL E VTTPCGHS CR CL+QAL +CP+CR V I+ + + L + ++ FP Y +R E L+P+F ++ + P + L L++FEPRYRLM++RI++G+ R V + G+ DVA E+ E + DGR LE R+ I+ES G ++ + D+ P S E L ++ A E+A R+ + + + MPGP PE S W+ +L RQ + LL DT R+ + L+A Sbjct: 108 DFECTLCLKLLYEPVTTPCGHSFCRACLLQALDHGNRCPMCRTVLFISPRTYPVSVTLNNIIQKNFPDEYAERKSENESLTHLGINLMPLFVMDV-VLPCQKLSLNIFEPRYRLMVRRIMEGNHRMGMV-ILDSMTGSIADVACEVEIVECEALPDGRFYLEVEGRRRFRILES----WDQDGYRVAKIEWIEDIQPPEGSPEREDLQQLVIAAAELARTSITNAREAARMGRRSRHMELQAEGMPGPQYPEKFSFWLVNLLNLRPRQ-RLELLRLRDTRERITYSIGFLRA 392 The following BLAST results are available for this feature:
BLAST of NO01G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02530 ID=NO01G02530|Name=NO01G02530|organism=Nannochloropsis oceanica|type=gene|length=1161bpback to top protein sequence of NO01G02530.1 >NO01G02530.1-protein ID=NO01G02530.1-protein|Name=NO01G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=387bpback to top Synonyms
Publications
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