NO01G02480, NO01G02480 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G02480
Unique Name	NO01G02480
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2322
Alignment location	chr1:645283..647604 +

Link to JBrowse

Properties


Property Name	Value
Description	Deah (Asp-glu-ala-his) box polypeptide 35

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:645283..647604 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004386	helicase activity
GO:0016787	hydrolase activity
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR011709	DUF1605
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd
IPR007502	Helicase-assoc_dom

Homology

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BLAST of NO01G02480 vs. NCBI_GenBank
Match: EWM29177.1 (deah (asp-glu-ala-his) box polypeptide 35 [Nannochloropsis gaditana])

HSP 1 Score: 1100.9 bits (2846), Expect = 0.000e+0
Identity = 545/702 (77.64%), Postives = 608/702 (86.61%), Query Frame = 0

Query:    1 MTFWKPGAAAPRLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLGYGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYGGG 703
            M FWKPG AAP+L  ERP GLSE  A  T+GYNP  +LP KQQ+L LPIA+AR  ILYALERY+T+VLVGETGSGKSTQVPQYLHE GWT G RVVLCTQPRRVAA+TVA+RVA+EMGC LG  VGY VRFDSRVDE G+RT IKFVTDGLLLRETLYDPLLSAYSVI+LDEAHERSMYTDVLLGLLKKVRKRRPELRI+ISSATADAE FRD+FET T+ G S    ++      HD+TI+SI GRQHAVDV Y+ K  RNYLR+AV+ VLSI++ EGRGD+LVFLPGMEEID+AV   KE L  LG G+E+ VLVLPL++SLP HLQMKAL P  RHVERKV+FATNIAETSLTIEG+RFIVD GFVKLPVYDVRTGFESLVTT +S+AS            PGKC RLYTEEAF  L AHT PEVQRSNLAWMILQLKALGID+VM+FDFI+QPSAEA+MRGLELLYALGALDDRC L+ +LGEKMAEFPVEPRLAK+LLASFDFHCTEEALT+VALLQVQN+WT+PKGRESR +QE +M++LA R+GDHLTLL IYR WEEAGRS EWC+E F+NPRSL RAREIRGQLR+YLERYKP GSVFASC +D+EALRRC++ GFFFNAARL+SDGRY+TVR  HPVALH  SVLAKYG PAEW+V++DVV+T+EPFLRDCSRIQPLWLMELAPHFYAYGGG
Sbjct:    1 MAFWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVS----SEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG-GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYKPKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYGGG 697

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BLAST of NO01G02480 vs. NCBI_GenBank
Match: CBJ30697.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 713.4 bits (1840), Expect = 7.100e-202
Identity = 373/721 (51.73%), Postives = 493/721 (68.38%), Query Frame = 0

Query:    3 FWKPGAAAPRLREERPVGLSEAGASSTLG-YNPR-SKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAV---------TNTKEQLGG------LGYGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAF-IKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPK--GRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYGGGG 704
            FWKPG + P        GL     S +L   +P+ SKLPL+ QR  LPI + R+ +L+A++++R +VLVGETG GK+TQ+PQYLHE GWT G R V+CTQPRRVAA TVA+RVA+EMG  LG+ VGY VRFDSRV   G  T +KF TDG+LLRE + DPLL+AYSV+MLDEAHER++Y D+L GLLKK+ ++R ELR+I++SAT DAE FRD+FET+                      I+SI GRQH VDVLY EKP  NY+RAAV+A L++   E  GD+L+FLPG EEID AV         + T  + GG       G G    + VLP Y++LP + QMK   P  + V R+++ AT IAETS+TI+ +R+++D GF++LP YD   GF +L+TT  SKAS            PGKC+RL TEE +  +LPA T+PE+QRS+L+W++L LKALGID+++ F+F+S P+AE M+R LELLYALGALDD C L+  LG  MAEFPVEP LAK L +++DF C E+ALTV A+L VQN +  P+  GRE R    E+M + A  EGDH+T L+++ +++E G   EWC E  +N R+L RA EIR QL +Y +++ P G   +SC +D  ALRRC+VAGFF N A+L  DGRY TVR    VA+HP+SVLA +G+P EW++F+++  T++ F RD S + P WL+ELAPHFY + G G
Sbjct:    4 FWKPGTSGPG-------GLERGDGSESLHIVDPKLSKLPLQTQRHALPIYRHRNSVLFAVQKHRAIVLVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAAFTVATRVAEEMGSRLGETVGYSVRFDSRV---GPATKVKFCTDGMLLREMMLDPLLTAYSVVMLDEAHERTIYNDILFGLLKKIMRKRKELRVIVASATLDAEQFRDFFETN-----------XXXXXXXXXXXILSIQGRQHPVDVLYTEKPVSNYVRAAVDAALAVHSSEPVGDVLIFLPGAEEIDAAVEMLRDHAPQSATSGKWGGWGGSTAKGVGEGGPLQVLPFYSALPINTQMKVFEPTRQGV-RRIVVATTIAETSVTIDRIRYVIDPGFIRLPFYDPAQGFGALLTTLTSKASAKQRAGRAGRVSPGKCLRLMTEEDYHAQLPAQTIPEMQRSDLSWVVLLLKALGIDDILHFEFLSPPAAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCLAKFLASAWDFGCVEDALTVAAMLSVQNPFVHPRGGGRERRERVREAMEEFAVTEGDHITYLNVFNSFDETGNDSEWCKENCLNHRALVRAGEIRQQLSRYCKKFAPPGQHVSSCGDDVNALRRCLVAGFFANVAKLSPDGRYRTVRDSTVVAIHPSSVLAHFGSPPEWILFNEISKTSQLFARDVSVVDPRWLIELAPHFYEFRGAG 702

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BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_010221284.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Tinamus guttatus] >KGL82986.1 putative ATP-dependent RNA helicase DHX35 [Tinamus guttatus])

HSP 1 Score: 647.1 bits (1668), Expect = 6.300e-182
Identity = 339/701 (48.36%), Postives = 466/701 (66.48%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER      +G +  + YNP + L ++QQR +LP+ + R+ ILY +E Y+TLV+VGETG GKSTQ+PQYL E GWT  GRVV  TQPRRVAAVTVA RVA E G +LG +VGY +RFD   D   TR  IKF+TDG+L+RE + DPLL+ YSV+MLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DAE FRD+F           N+ +        + I+++ GR   VD+ Y++ P  +Y+++ VE V+ I Q E  GDILVFL G EE++  V+   EQ   L   G++  + +LP+YA LP   QMK      R V RKV+ ATNIAETS+T+ G+ F++D GFVKL  Y+ +T  E LV  P+SKAS             GKC RLYTEE F KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  C L+  LG ++AEFP+ P  AK+LL S +F C+EE LT+ A++Q+QN++  P  ++S+A ++      A  EGDHLT+L++Y A+ +  +S +WC E F+N + L RA  +R QL+K L R+K   +   S   D + + RCIV+GFF NAA+L S G Y T+R +H + +HP SVL     P  WV++++V+ T + ++RD + I+  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQSPAESSGVN--IFYNPYASLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPRATR--IKFLTDGMLVREMMADPLLTKYSVLMLDEAHERTLYTDISIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF-----------NQNETNDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIQSTVETVMKIHQAENDGDILVFLTGQEEVETVVSMLIEQARALSRTGMKKHLRILPMYAGLPSVEQMKVFERVSRSV-RKVIVATNIAETSITVHGITFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDTHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSEEILTIAAMMQIQNIFVVPPNQKSQAARQH--RKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPNT---SSEGDPDTILRCIVSGFFANAAKLHSTGVYRTIRDDHELHIHPTSVLYA-EKPPRWVIYNEVIQTAKYYMRDVTAIESAWLLELAPHFYQQG 688

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BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_020011935.1 (probable ATP-dependent RNA helicase DHX35 isoform X1 [Castor canadensis])

HSP 1 Score: 646.7 bits (1667), Expect = 8.200e-182
Identity = 341/701 (48.64%), Postives = 470/701 (67.05%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER       G  +T+ YNP + L ++QQR +LP+ + R+ ILY +E Y+T+V+VGETG GKSTQ+PQYL E GWT  GRVV  TQPRRVAAVTVA RVA+E G +LG +VGY +RFD   D   TR  IKF+TDG+L+RE + DPLL+ YSVIMLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DAE FRD+F           N+  + A  T    I+++ GR   VD+ Y++ P  +Y+++AVE V+ I Q EG GDIL FL G EE++  V+   EQ   L   G+   + VLP+YA LP   QMK      R V RKV+ ATN+AETS+TI G+ +++D GFVKL  Y+ RT  E LV  P+S+AS             GKC RLYTE+AF KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  CHL+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++  P  ++S+A++       A  EGDHLT+L++Y A+ +  ++ +WC E F+N + L RA  +R QL+K L +++       S   D + + RCIVAGFF NAAR  S G Y T+R +H + +HPASVL     P  WV++++V+ T++ ++RD + I+  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQSVTENFG--TTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDALATR--IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFN---------QNETGDPAKDT--CVILTVEGRTFPVDIFYLQSPVPDYIKSAVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMTKHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEDAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCHLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVH--RKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAAAVREQLKKLLVKFQVPKK---SSEGDPDPVLRCIVAGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688

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BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_003220640.2 (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X2 [Anolis carolinensis])

HSP 1 Score: 646.0 bits (1665), Expect = 1.400e-181
Identity = 343/703 (48.79%), Postives = 469/703 (66.71%), Query Frame = 0

Query:    1 MTFWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            M FWKPG   P   L EER    +E+G  S + YNP   L ++QQR +LP+ + R+ ILY +E Y+TLV+VGETG GKSTQ+PQYL E GWT  GR+V  TQPRRVA V++A RVA+E G +LG +VGY +RFD   D   TR  IKF+TDG+L+RE + DPLL+ YSVIMLDEAHER++YTD+ +GLLKKV+K+R +LR+I++SAT DAE FRD+F           N+ +        + I+++ GR   VDV Y++ P  +Y+++ VE V+ I Q EG GDIL FL G EE++  V+   EQ   L   G++  + VLP+YA LP   QMK       +V RKV+ ATNIAETS+TI G+ F++D GFVKL  Y+ +T  E LV  P+SKAS             GKC RLYTEE F KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  C L+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++  P  ++S+A++E      A  EGDHLT+L++Y A+ +  +S +WC + F+N + L RA  +R QL+K L ++K       SC  D + + RCIV+GFF NAAR  S G Y T+R +H + +HP SVL     P  WVV+++V+ T++ ++RD + I+  WL+ELAPHFY  G
Sbjct:    8 MKFWKPGTDGPGVNLSEERQ-SPAESGCVSVI-YNPYVSLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLMEAGWTAEGRIVGVTQPRRVACVSIAGRVAEERGALLGHEVGYCIRFDDCTDPQATR--IKFLTDGMLVREMMADPLLTRYSVIMLDEAHERTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFF-----------NQNETSDPSKDTSMILTVEGRTFPVDVFYIQSPVPDYVKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARILARTGMKKHLRVLPMYAGLPASEQMKVFERVSHNV-RKVIVATNIAETSITINGISFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNHSGKCYRLYTEEDFEKLPQSTIPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDKYCRLTEPLGIRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFIIPPNQKSQAIREH--RKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQDHFLNYKGLVRATAVREQLKKLLVKFKVPKK---SCEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPTSVLYA-EKPPRWVVYNEVIQTSKYYMRDVTTIESAWLLELAPHFYQQG 688

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BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_004687438.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Condylura cristata])

HSP 1 Score: 645.6 bits (1664), Expect = 1.800e-181
Identity = 338/701 (48.22%), Postives = 472/701 (67.33%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER   L+E  +++T+ +NP + L ++QQR +LP+ + R+ ILY +E Y+T+V+VGETG GKSTQ+PQYL E GWT  GRV+  TQPRRVAAVTVA RVA+E G +LG +VGY +RFD   D   TR  IKF+TDG+L+RE + DPLL+ YSVIMLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DAE FRD+F           N+ D          I+++ GR   VD+ Y++ P  +Y+++ VE V+ I Q EG GDIL FL G EE++  V+   EQ   LG  G++  + +LP+YA LP   QMK      R V RKV+ ATN+AETS+TI G+ F++D GF+KL  Y+ RT  E LV  P+S+AS             GKC RLYTEEAF KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  C L+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++ +P  ++ +A++       A  EGDHLT+L++Y A+ +  +S +WC E F+N + L RA  +R QL+K L R++       S   D + + RCIVAGFF NAAR  S G Y T+R +H + +HPASVL     P  WV++++V+ T++ ++RD + ++  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQ-SLAE-NSATTVVFNPYAALSIEQQRQKLPVFRLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVIGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATR--IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF-----------NQNDTSDPSRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRILPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVFVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGTRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFLTPSNQKFQAIRMH--RKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAVTVREQLKKLLVRFQVPK---ISSEGDPDPVLRCIVAGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAVESAWLLELAPHFYQQG 688

[Close]

BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_016008793.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Rousettus aegyptiacus])

HSP 1 Score: 645.6 bits (1664), Expect = 1.800e-181
Identity = 339/701 (48.36%), Postives = 473/701 (67.48%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER   L+E  +++T+ YNP + L ++QQR +LP+ + R+ ILY +E Y+T+V+VGETG GKSTQ+PQYL E GWT  GRVV  TQPRRVAAVTVA RVA E G +LG +VGY +RFD   D   TR  IKF+TDG+L+RE + DPLL+ YS IMLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DAE FRD+F           N+  +  + T    I+++ GR   VD+ Y++ P  +Y+++ VE V+ I Q EG GDIL FL G EE++ AV+   EQ   LG  G++  + VLP+YA LP   QMK      R V RKV+ ATN+AETS+TI G+ +++D GFVKL  Y+ RT  E LV  P+S+AS             GKC RLYTEEAF KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  C L+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++  P  ++S+A++  +    A  EGDHLT+L++Y A+ +  ++  WC E F+N + L RA  +R QL+K L +++       S   D + + RCI++GFF NAAR  S G Y T+R +H + +HPASVL     P  WV++++V+ T++ ++RD + I+  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQ-SLAE-NSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDSLATR--IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFN---------QNETSDPTMDT--CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETAVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIR--AHRKFAVEEGDHLTMLNVYEAFIKHNKNSRWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKK---SSEGDPDPVLRCIISGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688

[Close]

BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_006188694.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Camelus ferus] >XP_014418007.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Camelus ferus])

HSP 1 Score: 645.2 bits (1663), Expect = 2.400e-181
Identity = 339/701 (48.36%), Postives = 472/701 (67.33%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER   L+E  +++T+ YNP + L ++QQR +LP+ + R+ ILY +E Y+T+V+VGETG GKSTQ+PQYL E GWT  GRVV  TQPRRVAAVTVA RVA+E G +LG +VGY +RFD   +   TR  IKF+TDG+L+RE + DPLL+ YS IMLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DAE FRD+F           N+ D          I+++ GR   VD+ Y++ P  +Y+++AVE V+ I Q EG GDIL FL G EE++  V+   EQ   LG  G++  + VLP+YA LP   QMK      R V RKV+ ATN+AETS+TI G+ +++D GFVKL  Y+ RT  E LV  P+S+AS             GKC RLYTEEAF KLP  T+PE+QRSNLA ++LQLKALGID V+ F F+S P A++M++ LELLYALG LD  C L+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++  P  ++S+A++       A  EGDHLT+L++Y A+ +  +S +WC E F+N + L RA  +R QL+K L +++       S   D + + RCIV+GFF NAAR  S G Y T+R +H + +HPASVL     P  WV++++V+ T++ ++RD + I+  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQ-SLAE-NSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATR--IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF-----------NQNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSAVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFEKLPQSTVPEMQRSNLAPVVLQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRVH--RKFAVEEGDHLTMLNVYEAFIKHSKSSQWCQEHFLNHKGLVRAAAVREQLKKLLVKFQVPKK---SSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688

[Close]

BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_006202603.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Vicugna pacos] >XP_015093303.1 PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Vicugna pacos])

HSP 1 Score: 645.2 bits (1663), Expect = 2.400e-181
Identity = 340/701 (48.50%), Postives = 471/701 (67.19%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER   L+E  +++T+ YNP + L ++QQR +LP+ + R+ ILY +E Y+T+V+VGETG GKSTQ+PQYL E GWT  GRVV  TQPRRVAAVTVA RVA+E G +LG +VGY +RFD   +   TR  IKF+TDG+L+RE + DPLL+ YS IMLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DAE FRD+F           N+ D          I+++ GR   VD+ Y++ P  +Y+++ VE V+ I Q EG GDIL FL G EE++  V+   EQ   LG  G++  + VLP+YA LP   QMK      R V RKV+ ATN+AETS+TI G+ +++D GFVKL  Y+ RT  E LV  P+S+AS             GKC RLYTEEAF KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  CHL+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++  P  ++S+A +       A  EGDHLT+L++Y A+ +  +S +WC E F+N + L RA  +R QL+K L +++       S   D + + RCIV+GFF NAAR  S G Y T+R +H + +HPASVL     P  WV++++V+ T++ ++RD + I+  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQ-SLAE-NSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATR--IKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFF-----------NQNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCHLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQASRVH--RKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKK---SSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688

[Close]

BLAST of NO01G02480 vs. NCBI_GenBank
Match: XP_011784438.1 (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Colobus angolensis palliatus])

HSP 1 Score: 645.2 bits (1663), Expect = 2.400e-181
Identity = 339/701 (48.36%), Postives = 475/701 (67.76%), Query Frame = 0

Query:    3 FWKPGAAAP--RLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIAQARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQPRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDGLLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRIIISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHAVDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNTKEQLGGLG-YGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNIAETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASXXXXXXXXXXXXPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMSFDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAKVLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQREGDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERYKPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALHPASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG 701
            FW+PG   P   + EER   L+E  + +T+ YNP + L ++QQR +LP+ + R+ ILY +E Y+T+V+VGETG GKSTQ+PQYL E GWT  GRVV  TQPRRVAAVTVA RVA+E G +LG +VGY +RFD   D+  TR  IKF+TDG+L+RE + DPLL+ YSVIMLDEAHER++YTD+ +GLLKK++K+R +LR+I++SAT DA+ F+D+F           N+  + A  T  + I+++ GR   VD+ Y++ P  +Y+++ VE V+ I Q EG GDIL FL G EE++  V+   EQ   L   G++  + VLP+YA LP   QMK      R V RKV+ ATN+AETS+TI G+ +++D GFVKL  Y+ RT  E LV  P+S+AS             GKC RLYTEEAF KLP  T+PE+QRSNLA +ILQLKALGID V+ F F+S P A++M++ LELLYALG LD  CHL+  LG ++AEFP+ P  AK+LL S +F C++E L++ A++Q+QN++  P  ++S+A++       A  EGDHLT+L++Y A+ +  ++ +WC E F+N + L RA  +R QL+K L +++       S   D + + RCIV+GFF NAAR  S G Y T+R +H + +HPASVL     P  WV++++V+ T++ ++RD + I+  WL+ELAPHFY  G
Sbjct:   10 FWRPGTEGPGVSISEERQ-SLTE-NSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR--IKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFQDFFN---------QNETSDPARDT--SVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCHLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVH--RKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKK---SSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688

The following BLAST results are available for this feature:

BLAST of NO01G02480 vs. NCBI_GenBank

BLAST of NO01G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29177.1	0.000e+0	77.64	deah (asp-glu-ala-his) box polypeptide 35 [Nannoch...	[more]
CBJ30697.1	7.100e-202	51.73	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_010221284.1	6.300e-182	48.36	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]
XP_020011935.1	8.200e-182	48.64	probable ATP-dependent RNA helicase DHX35 isoform ...	[more]
XP_003220640.2	1.400e-181	48.79	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]
XP_004687438.1	1.800e-181	48.22	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]
XP_016008793.1	1.800e-181	48.36	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]
XP_006188694.1	2.400e-181	48.36	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]
XP_006202603.1	2.400e-181	48.50	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]
XP_011784438.1	2.400e-181	48.36	PREDICTED: probable ATP-dependent RNA helicase DHX...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL002	nonsL002	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR086	ngnoR086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008091	NSK008091	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G02480.1	NO01G02480.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|576661	gene_240	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100007g72	gene1453	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G02480.1	NO01G02480.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G02480 ID=NO01G02480|Name=NO01G02480|organism=Nannochloropsis oceanica|type=gene|length=2322bp
ATCACAGGCGCGGTCATGACGTTCTGGAAGCCGGGAGCCGCGGCACCAAG
GCTGAGAGAGGAGCGGCCGGTGGGGTTGTCGGAAGCGGGTGCTAGCAGCA
CCCTGGGGTACAACCCTCGCAGCAAGCTCCCTCTCAAGCAGCAACGTCTG
CAGTTGCCAATTGCTCAGGCTCGATCCGGCATTTTGTATGCACTGGAGCG
CTACCGTACGCTGGTTCTGGTAGGTGAGACGGGCTCGGGCAAGTCTACGC
AGGTACCGCAGTATTTGCACGAAGGGGGGTGGACTCATGGTGGGAGGGTA
GTACTCTGCACACAGCCCCGCCGCGTGGCGGCCGTTACTGTGGCCTCACG
CGTGGCTCAAGAGATGGGTTGCATACTAGGACAACAAGTGGGCTATGTCG
TACGGTTTGACAGTCGTGTGGATGAGGCTGGGACGCGCACGGCCATTAAA
TTCGTGACGGACGGCCTGCTGTTGAGGGAGACGCTTTATGACCCCTTGCT
TTCAGCCTATTCGGTCATCATGCTCGACGAGGCCCATGAACGCAGCATGT
ACACCGATGTGCTTTTAGGTTTGTTGAAAAAAGTGCGCAAGCGCCGGCCC
GAACTTCGCATCATCATCTCGTCCGCCACGGCCGACGCAGAGGCGTTTCG
GGACTATTTTGAGACGCATACCCATAGTGGTGGCAGCATCAGCAACAAGG
CAGACAACCAAGCCATTGGCACACACGACGCCACCATCATAAGCATTATG
GGGCGACAACATGCCGTAGACGTATTGTACATGGAAAAGCCGGCGCGGAA
CTACTTGCGGGCGGCCGTCGAGGCGGTTCTCTCCATCGTGCAAGGAGAGG
GCAGGGGGGACATTCTCGTCTTTTTGCCAGGCATGGAAGAGATAGACCAA
GCTGTCACCAACACAAAAGAACAGTTGGGGGGCCTGGGCTACGGAGTGGA
AGATGCGGTGCTGGTTCTGCCTCTGTACGCCTCCCTGCCGCAGCACCTGC
AGATGAAAGCTCTGGGGCCTGCCCCACGACACGTTGAGCGCAAGGTCCTT
TTTGCCACCAACATCGCCGAGACTTCTTTGACCATTGAAGGAGTCCGTTT
TATTGTAGATACAGGATTTGTCAAACTTCCTGTGTATGACGTGCGGACGG
GATTTGAATCCCTCGTCACCACGCCCATCTCCAAGGCCAGCGCCGCACAA
CGCGCCGGTCGAGCAGGCCGCACGGGACCGGGGAAATGTATGCGGTTGTA
CACCGAGGAGGCTTTCATAAAACTACCTGCTCATACTTTGCCCGAGGTAC
AGCGGAGCAACTTGGCTTGGATGATTCTGCAGCTCAAGGCGCTGGGGATC
GACGAGGTCATGAGCTTTGACTTCATTTCGCAGCCCTCGGCCGAAGCTAT
GATGCGTGGCCTAGAGCTGCTGTACGCCCTGGGCGCGCTGGACGATCGCT
GCCATCTCAGCTCGGAGCTTGGAGAGAAAATGGCCGAGTTCCCGGTAGAA
CCTCGCTTGGCCAAGGTGTTGCTAGCTTCATTTGATTTCCACTGCACGGA
AGAGGCATTGACGGTAGTGGCCCTCCTCCAAGTCCAGAACTTGTGGACGA
GCCCCAAGGGCCGCGAGAGCCGGGCGCTTCAGGAAGAGTCCATGTCCGAT
TTGGCTCAACGTGAGGGAGATCATCTGACGCTGCTGCATATCTATCGAGC
ATGGGAAGAGGCAGGCCGGTCCATGGAGTGGTGCACAGAGCGCTTTATTA
ATCCACGCAGCCTAGCCCGCGCGAGAGAGATTCGAGGCCAGCTCCGAAAA
TACTTGGAGAGATACAAGCCAGCCGGCAGTGTCTTTGCTTCGTGCTGCGA
GGACACCGAGGCTCTGCGCCGGTGCATCGTGGCAGGATTTTTTTTTAATG
CGGCACGGCTTCAGAGCGACGGAAGGTATTTCACGGTGCGAGGGGAGCAC
CCTGTGGCCCTCCACCCGGCTTCTGTGCTGGCCAAGTATGGGACACCGGC
AGAATGGGTCGTTTTTCATGACGTCGTTCTAACCACCGAACCTTTCTTGC
GGGATTGTTCTCGTATCCAGCCCCTTTGGTTGATGGAGCTGGCCCCGCAC
TTCTATGCCTACGGTGGCGGAGGACGAAACGTATGGCCTAACCTGGTGTA
AGAAAAACCTGCAATATATACGGAATCCGCAAATTGTTTTTTATTATGCG
AGACTTGGCCGCCAAACAGAAAGGTGTACAAAAAGAAACGTAGAAAGTGA
GTTTACGTAGATATAGTAAGTGTAGGTACAGTAAGAAGCAAGTAATTTAA
ATAAAAAAAAATCGAGCATGCG

protein sequence of NO01G02480.1

>NO01G02480.1-protein ID=NO01G02480.1-protein|Name=NO01G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=712bp
MTFWKPGAAAPRLREERPVGLSEAGASSTLGYNPRSKLPLKQQRLQLPIA
QARSGILYALERYRTLVLVGETGSGKSTQVPQYLHEGGWTHGGRVVLCTQ
PRRVAAVTVASRVAQEMGCILGQQVGYVVRFDSRVDEAGTRTAIKFVTDG
LLLRETLYDPLLSAYSVIMLDEAHERSMYTDVLLGLLKKVRKRRPELRII
ISSATADAEAFRDYFETHTHSGGSISNKADNQAIGTHDATIISIMGRQHA
VDVLYMEKPARNYLRAAVEAVLSIVQGEGRGDILVFLPGMEEIDQAVTNT
KEQLGGLGYGVEDAVLVLPLYASLPQHLQMKALGPAPRHVERKVLFATNI
AETSLTIEGVRFIVDTGFVKLPVYDVRTGFESLVTTPISKASAAQRAGRA
GRTGPGKCMRLYTEEAFIKLPAHTLPEVQRSNLAWMILQLKALGIDEVMS
FDFISQPSAEAMMRGLELLYALGALDDRCHLSSELGEKMAEFPVEPRLAK
VLLASFDFHCTEEALTVVALLQVQNLWTSPKGRESRALQEESMSDLAQRE
GDHLTLLHIYRAWEEAGRSMEWCTERFINPRSLARAREIRGQLRKYLERY
KPAGSVFASCCEDTEALRRCIVAGFFFNAARLQSDGRYFTVRGEHPVALH
PASVLAKYGTPAEWVVFHDVVLTTEPFLRDCSRIQPLWLMELAPHFYAYG
GGGRNVWPNLV*

Synonyms

Publications