NO01G02470, NO01G02470 (gene) Nannochloropsis oceanica

Overview
NameNO01G02470
Unique NameNO01G02470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1908
Alignment locationchr1:642804..644711 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:642804..644711 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G02470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL002nonsL002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR086ngnoR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02470.1NO01G02470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02470.1NO01G02470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02470 ID=NO01G02470|Name=NO01G02470|organism=Nannochloropsis oceanica|type=gene|length=1908bp
ATGAATGACGCCGTCGCCACGGAGCTGGAGCTATTGCGTGGCAATTTTTA
CGACGATGGCTTGCTAATCGAGGAGAGGTCGTCGGAGGAGGAGGAGGACG
GCAGCGGCGGTGGAAATGGGGGAAAAGAGgcaaggttttgtccatcaggg
gtcaacattcctttttattttacacttaccactcttcatccgctagttgc
tccagggatctcatacccccatcatccgttcaccctcccttcctcactct
ctcctgcctttccctctacccaagcaaccaaatcaagatttcctttatct
gtcaaccacgcaccaaaaatcccctccctctaatctttcctcacttcgtt
tccctctctctcactcctccttcccttttacagAAAGACTTCGTCGAGAT
CTCCCTACTCTGTCGGCCACGCACGGCCGGCCGCGTCGAAGAGGAGTTGG
TTCAAGCCCGACTGGTGCTAGTGCTGGATAAGgtaaggagggatggagga
aggaatggatagatggagggaacgggtgtaagtgtggacgtgcttgctgt
ttcaagacgcattcattcctctcttctaatctccccttcttcttccctcc
ctccctctcccccccccttctcctccctcccttcctccctcccgtctgtc
cggcctctccattctcccagACCAGCTATCCCTCCCTCCCTCCCGCCTTC
TCCCTCCCCTTCACCCCCGGCCTGGGCGACGACGAGGTAGCCCAGGTGCA
CTCGAGGATAACCAACGTGTGGCGCGGCCTTTATGGAGAGAGGGAGGGCG
AGGAGGGGAAGGAGGAAGGGGAGGAGGAAGGGGTCCTGGGCTGCTTGCCT
TTATTGGAGGCAGCCACAGACGCGCTGGACGAGCTGAATCAAAAAGTCGT
GTGTTCGATATGCCTCATGCCCCTGCTAGGAAGGGAGGGCGGGGGGGAGG
GAGGGGTGATGAGGACGGAGGGGTGCTATCACTGCTTTCATGTGGGATGT
CTGTCCGAATGGTGGGCAAGGAGGGAGAGGGCGGATAGGGAAGGCAGAAA
GGAGGGAGGAGGTGGAGGAGTGTGGGGGGGACGGGTGCAGACTCTGCAGg
tgaggaaggagggaaggagggaaggagggaagaaggaaaggagcgtggat
gtcgtctgtgccatcgccttgcattcatgcacttgcccccctttcttccc
tcttcaaccaaccagCGCCTTCTCGCCCGGCGACGTGGAGAGAAGGAGGA
GGAGGAGCACGCCCTTTGCGTCTGTCAGTCCCGCTTGGACGAGGTTGCCG
CCTTCCTCCTCAGgtgcgattctcgtattccctgccccccccctcccccc
ttgccaacactcacgaggacacgcccctcgtccgcccccccccctctccc
ccttccttccctccgttcattacttcgcccctccctccctccagCCCTGA
CCTCGACAGCGAAATCCGCAGCGCCTTTCAAAAGGACCTCTCGGAGGAAG
AGAGGCGGAAACGACAGCTCCGTCTCGCCATTAAATCCACTGGCACCAAA
GTGCTTCAGgtacgccctccctccctcccttccaccagtcgttcttgtcg
ctcaacatccacccctccctccctttctcccttcctctctttctcccgcc
acaattttttaagagacaatcaaattgaaagactagagaaagccttactg
catcaattcaatataccaagAACGGAGGCAATGCCACACAAGTCTTAATT
CGCGGCCTAACATTAATTAGAAATTACTTGGGAACGCCAAATGCACAACA
CGGAGgtaaaagacataccaagtcacgtggtgaaatatgtagacctgatt
cttttttatcttttgtgcgacagGTCAAGTGGCGGGGTGGTGCTTGGGAA
AAACATAA
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protein sequence of NO01G02470.1

>NO01G02470.1-protein ID=NO01G02470.1-protein|Name=NO01G02470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=330bp
MNDAVATELELLRGNFYDDGLLIEERSSEEEEDGSGGGNGGKEKDFVEIS
LLCRPRTAGRVEEELVQARLVLVLDKTSYPSLPPAFSLPFTPGLGDDEVA
QVHSRITNVWRGLYGEREGEEGKEEGEEEGVLGCLPLLEAATDALDELNQ
KVVCSICLMPLLGREGGGEGGVMRTEGCYHCFHVGCLSEWWARRERADRE
GRKEGGGGGVWGGRVQTLQRLLARRRGEKEEEEHALCVCQSRLDEVAAFL
LSPDLDSEIRSAFQKDLSEEERRKRQLRLAIKSTGTKVLQNGGNATQVLI
RGLTLIRNYLGTPNAQHGGQVAGWCLGKT*
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Synonyms
Publications