NO01G02450, NO01G02450 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G02450 vs. NCBI_GenBank
Match: EWM29111.1 (hypothetical protein Naga_100007g74 [Nannochloropsis gaditana]) HSP 1 Score: 934.9 bits (2415), Expect = 3.700e-268 Identity = 715/1780 (40.17%), Postives = 928/1780 (52.13%), Query Frame = 0
Query: 1 MSSGVQHTASSAMASAVAAKAKTAGT-----------SLEDGDLTINTNHALNVTADTQDLRKVMAMLQD-NDNADEGATVKLPTSPLLDDATIQLPSSLLPDPMRHKVTLGEKEGCSPAPATEGSENMKKGNDTXXXXXXXXXXXXSCTGGK-RTNADRVAEMRGPLRALNV--HADLAPEASVEQLNRRQTVDDGALEDFFKDFKGKENGKDGGEKENQQSAATVTTAVVAPETIATMTMTSAGVGTLASTDGLAERRETADPESLRYLLTLLKSPGSTGPASRASLSVSPSIAIKNILGTALAAADEEAKEAEREGGDGTTGATTTAIATGSSSNMTGRDEMAVADLTADTSQVERLIVDLETSLSEGVGGVTGILGEGTANFFVSPIARRRSSILARRLTADPELLEDLINELTGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADIGMLLADLPAEGVEEGGVDGVQGKK--GRKSLRLAEQIKAPTGVPAVAGGTFSMSPPPLPPHGSSLKSLRSCLSSKKERPSQTLPPASPGLDLSGSGTRKSVVFGSPNAAYFNKGSPSNSLTPMTKRDVDLIFMRGGGG-GREAAECESGVTAENTAILAQWNEDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANMGVEAEVR---SIGGNSLXXXXXXXXXXXXXXXXXXXXXXXXXGQD-CDMAMAM-DVSPALSTXXXXXXXXXXXXXXXXXXXMPDLEDRSSSPSNFRALDQRTSSQLGIIGAAAA-----GGEGGVREE-TMELEQNLQSLMHNTRPLISAAVAGAARVXXXXXXXXXXXXXXXXAEGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQMSQLHDPTSTTTFKANGEDLRISLDSQDNSFEEDGAGGDDATHTSILDNKIGGHTFSLSFAGNHVGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGQVSKKRSSLTRSSTGSTISRRRSSGAGDRTSSPFAHIVVGSRLRGAPATXXXXXXXXXXXXESTDSLVVSAMTGERKRHPSTSCTSSPFTSSEDRHKRHKSLREVSATALAEAEEVSTAMPIEFDWQRVVAFQQERGNIMRLV--GVMKEGKQEGEKEGMP-------VALLRQAVLESLLENCESVALNQLQRGDEVDGSKAIEADGDEXXXXXXXKGVEFDVQDVEALQEAMLVALTLPSAAKNEGEGGTEDQAVAMKQLIAAVAPRLELEWQSLESQLLQMVRMRVTQEMGTLKKRSVELAADMERVSAIEGEVQEAIGVLQAKCMVLRAQRKDADRQHRLEELEARQREASERAVALAKHEEALKMAVFREKEAAKTRDAARQMISQIRAALTEKNREAEAVQAIEEKGRVLRGLFLWQPLVLTNEELSFACAHPDGSRTEVRLLLKGNGTGASEKVVVTDAQVTHMPPAPGRNNREQIGRIMCGPNSRTLLLHTLRSLTIFTSMEXXXXXXXXXXXXVTGKHAHALWAQGMQCWSWKSLCVDVADVPGALARLERLLGRTHLLMEAVARLEAVYPCTLVVGEAAVRSEAWVEECLYGACTTCRFDHGQSGGGGAPHIRLPHCSAVLVATVQPSTVKRGVNYPAVQAKFLLSLSFLASIPLRVEPALDASKLGCLQKVEGLLTNRLGVPPHHPINIQARKGWQAADMLVEACRVLKEEGGL 1743
MS G+ + A + V A + T SLED L +T ALNVTADTQD+R V+AMLQ+ D D TV +PTS ++ TI++PS LL + +G A EG EN+ C+ K R+ D+ +RGPLR LNV H+ LA ++ + +R Q G D N + G E + + A+ T + ++ + + T +G + S + LA RRETADPESLRYLLTLL+SPG + S+ SLSVSP AI+ ILG LAA DE ++ + GGD +T AT ++ + ++T DT +ERLIVDLETSL GG T + + T + F+SPIARRRSSI+ARRLTADP LLEDLI+ELTGG P DIGMLLA+LP++ +GG +G++ GR L EQ A TG ++SMSPPPLP GS+ K LRSCLSSKKERP+Q PASPG SGS T+KSVVFGSPNAAYF+K SPSNSLTPMTKRDV+ IF + G+ A E E+GVTAENTAILA+WN+ A AN V A+V SIGGNSL GQD D ++A + SPA ++ MPDLE+RSSSP NFR LDQRTSSQLGI+GA + G +G +EE T+ELEQ+L+SL+ N RP S AG G + EE MSQ D T+TTTF GED+R+S DS+DNSF G DAT+TSILDN H FSL XXXXXX + ++S+ + ++ + + + G GD TSSPFAHIVVG+RL S+ + A+ + + T + S R + +L + A EA DW+ V+AFQ +R NIMRLV ++E + E A L++ E+LLENCE VA+N + + G + + D ++ GVEFDV D EAL++ ML T ++ K++ EG Q++ + LI AVAPRL+LEW+S+E+Q+LQMVRMRV QEM + ++ L D++ VS+++ E+Q AI + K ++AQRKD RQ RL+EL+ +EA E A AL E LK A+ E+E+ ++R+A RQM +++RAA+ EK +EAE V +EE+G+VLRGL LWQP VLT+EEL F CAHPD SRT+VR+ L+ + KV VT V H AP R +R + GPNSR LLLH LRS IF S E + GK + + +Q + WSW+ L VD+ +VP ALARLERL+GR HLLMEAVAR+EA++PCTLV+GE+A+RSE+WVEECLYGACTTCRFDHG+SG G PHIRLPHCS +LVA ++PS+ KRG P V AKFLLSLSFLAS+P+RVEP L +SK GCLQK+EGLLTNRLGVPPH PI+IQ + W+AA M+VEACR+L EGGL
Sbjct: 1 MSMGINNGMPGARVAPVTAIGTSGVTDENAPELSKRLSLEDQGL--STIQALNVTADTQDIRHVVAMLQETGDGLDGDTTVNIPTSRWHEEETIRMPSGLLLTGAQ----TSAGKGSPAARPVEGDENV----------DINEALSDHCSASKHRSMIDQ--SVRGPLRTLNVVAHSGLADQS---KKSRAQEAILGGKGDLI------INKQSGSEVPSPRRGASNTVSKLSCQDGSIQT---SGDRSRPSAEELARRRETADPESLRYLLTLLRSPGGSVQGSQNSLSVSPGKAIEKILGPTLAAEDERGQDGDEGGGDSSTRATGAEAGEEEATAAQRQKRCVETNITVDTLHLERLIVDLETSL----GGGTPAVADSTTDSFISPIARRRSSIMARRLTADPGLLEDLIHELTGG-KGRRLSTVARSPASVVMTTLSTTRTSMAAAVCEVPTLAATDSRRATASPGDIGMLLAELPSDQGGQGG----EGRRPSGRTWLDTGEQ--AETGASC---SSYSMSPPPLPSQGSNRKLLRSCLSSKKERPTQP-SPASPGPSFSGSATKKSVVFGSPNAAYFHKSSPSNSLTPMTKRDVERIFPQHEESLGQAAVEMETGVTAENTAILAEWNDKDAGENGDEDESEEAAIRDQASEDAAFGKRKRVSKSPRPKRRQSLMLAAGSPGFMQYRHGPGATTRTDDEEGDP-------ANRAVVADVEDMDSIGGNSL---------NEKLEEAEEEDFAAAAGQDQADGSVASGEASPAPTSTSLRRRRSSGLSILSQDEEMPDLENRSSSPDNFRTLDQRTSSQLGIMGATESLDMGDGAKGNDKEECTVELEQDLRSLVKNVRP-ASVPAAGIMAPEDNTMELEGNLQALMQHVGEK---VTREGQSASSDRNKRVANLDIGLGGVDSDVEEGMSQSQDLTNTTTFHNKGEDIRLSFDSEDNSFH-----GADATNTSILDNPPHSHAFSLXXXXXXXXXXXXXXXXDKAVAGGARLTDLKSTTFDVDPLREEEADEDQSSGRRSGCPGDFERRSVVQKSTDSHPASPESAAGNINGGDGDTTSSPFAHIVVGNRLH----VPVSVQEDQSVSCPSSHPPPLDAVQSQPQEGAFTLLSKPYPYPSPARGAQDDNLAPQTEDAAGEAGCCGA-----LDWKGVMAFQNDRSNIMRLVRTATVEEANRGSESSSSDECHVATLTAHLQRVARETLLENCERVAINLYRCKQDESGIEMAQEDQEQ-----KNPGVEFDVPDTEALRQEMLAIST--ASGKDQEEG----QSIQVNALIRAVAPRLQLEWRSVENQILQMVRMRVRQEMEDVDEKGSRLKLDLDNVSSVQTEIQAAISTARDKFEHMQAQRKDTIRQLRLKELKTEHQEAVEEAAALEARERVLKEALVAEQESLQSRNAKRQMAARLRAAVEEKRKEAEIVLGVEEQGKVLRGLHLWQPSVLTSEELLFWCAHPDNSRTQVRMRLEAKKRDSIHKVFVTAVHVNHAASAPSRVSRNTPEELAFGPNSRELLLHVLRSFPIFASTEPPEPFVSAINEPLPGKRSRSFLSQSQRTWSWEVLSVDMTEVPAALARLERLVGRAHLLMEAVARVEAIHPCTLVLGESAIRSESWVEECLYGACTTCRFDHGRSGASGEPHIRLPHCSGILVANLEPSS-KRG-GSPLV-AKFLLSLSFLASVPVRVEPPLPSSKRGCLQKLEGLLTNRLGVPPHRPISIQGHQKWRAATMMVEACRLLGGEGGL 1687 The following BLAST results are available for this feature:
BLAST of NO01G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02450 ID=NO01G02450|Name=NO01G02450|organism=Nannochloropsis oceanica|type=gene|length=6359bpback to top protein sequence of NO01G02450.1 >NO01G02450.1-protein ID=NO01G02450.1-protein|Name=NO01G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1743bpback to top Synonyms
Publications
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