NO01G02440, NO01G02440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO01G02440 vs. NCBI_GenBank
Match: EWM29119.1 (hypothetical protein Naga_100007g75 [Nannochloropsis gaditana]) HSP 1 Score: 166.4 bits (420), Expect = 1.600e-37 Identity = 85/143 (59.44%), Postives = 102/143 (71.33%), Query Frame = 0 Query: 92 VTLDDIKGLSKEECLCLFRLLRPATLQQLHGEWQGEILAMGLLYPLAYLFWHWRLGRGWWLGKGIDAESRQGYNTFYNHGITTRNRRFEVFMGPSAYGWEEEKEGQEGETERRVEVGRHKQSE-IGVDEGAGNDGVPHERKGS 234 +T DDIKGLSKEECL LFRLL PATLQQLHGEWQGEILAMG+ YPLAYL WHWRLGRGWWLGKG+D + GYN FYNHGIT+R+RRF+ + G SAY E + R+ V +++ + + V+ A + V RK S Sbjct: 1 MTADDIKGLSKEECLFLFRLLPPATLQQLHGEWQGEILAMGMSYPLAYLLWHWRLGRGWWLGKGVDQATGCGYNVFYNHGITSRSRRFDAYTGLSAY--EARTKDPRDTRHSRLYVCKNQANRYLAVERAAEDKDVNSMRKWS 141
BLAST of NO01G02440 vs. NCBI_GenBank
Match: PKN32828.1 (hypothetical protein CVU61_16290 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19]) HSP 1 Score: 65.9 bits (159), Expect = 2.900e-7 Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 0 Query: 269 LASGGESLHLVYAPYNDGFFHRMHEEVRRVHDGLFLGFGSPGGLRGRTPFNSIPFLLVAPKAPLKQWDQE 339 L G ES HL Y+PYN G H MH+E+RR++D + +G G G G N PFL++ P AP D+E Sbjct: 152 LIDGKESFHLDYSPYNSGAVHSMHDELRRINDHIMIGMGYMG--LGGGSINPAPFLVIGPSAPWVGPDKE 219 The following BLAST results are available for this feature:
BLAST of NO01G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02440 ID=NO01G02440|Name=NO01G02440|organism=Nannochloropsis oceanica|type=gene|length=1023bpback to top protein sequence of NO01G02440.1 >NO01G02440.1-protein ID=NO01G02440.1-protein|Name=NO01G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=341bpback to top Synonyms
Publications
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