NO01G02310, NO01G02310 (gene) Nannochloropsis oceanica

Overview
NameNO01G02310
Unique NameNO01G02310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1625
Alignment locationchr1:600106..601730 +

Link to JBrowse

Properties
Property NameValue
DescriptionDiaminopimelate decarboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:600106..601730 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008836diaminopimelate decarboxylase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009089lysine biosynthetic process via diaminopimelate
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR029066PLP-binding_barrel
IPR009006Ala_racemase/Decarboxylase_C
IPR022644De-COase2_N
IPR022643De-COase2_C
IPR000183Orn/DAP/Arg_de-COase
IPR002986DAP_deCOOHase_LysA
Homology
BLAST of NO01G02310 vs. NCBI_GenBank
Match: EWM29202.1 (diaminopimelate decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 753.8 bits (1945), Expect = 3.200e-214
Identity = 376/480 (78.33%), Postives = 419/480 (87.29%), Query Frame = 0
Query:    7 MRALLLLVVSACLATAFLQPHFSSFEGRSIHSRSIRRG--GLIVAAADGVYGESSEELEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTSAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNELDLPASALS 485
            M+A+L  V S  +  AFL P +      S    +  RG   LIV+AADG  G +S E E LRFL P++VE +AN++GTPTY+YDM+TL ASAK AL+FPNAFGLTVRYAMKASPNAAILKLFNSLGLH+DASSGYEI+RAMRAGVP SHISLSSQELPSDFD +V  GV INACSISQL+RFG++C GGK+GLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVK VVA H L+VVR+HTHIGSGSDPAVWQNVA LSLDLVREFP+V TLNLGGGYKVGRM  E STDL KIGAPV++KFEDFA ETGRKLHLE+EPGTFLVANAGALVC +QDKT+TSAHTFLKLDAGMTEVLRPSLYGAQHPL+VIPKD+TRA++ A YVVVGHCCESGDLLTPAPGEADT++ER++T A+IGDL+VVEGSGAYCAGMSTKNYNSFPEAPEVM A  G  +LIRRRQTL+Q LQNELDLP SAL+
Sbjct:    1 MKAVLGCVSSLYVTAAFLGPQYRQVPSFSNGLNTWMRGRRQLIVSAADGTSGSTSLERETLRFLNPDIVENLANQYGTPTYIYDMATLKASAKSALSFPNAFGLTVRYAMKASPNAAILKLFNSLGLHIDASSGYEIQRAMRAGVPASHISLSSQELPSDFDSFVDLGVHINACSISQLQRFGERCSGGKIGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKRVVAEHKLQVVRVHTHIGSGSDPAVWQNVAALSLDLVREFPQVETLNLGGGYKVGRMRQEQSTDLAKIGAPVKEKFEDFALETGRKLHLEIEPGTFLVANAGALVCRVQDKTSTSAHTFLKLDAGMTEVLRPSLYGAQHPLVVIPKDRTRADRAAYYVVVGHCCESGDLLTPAPGEADTVSERELTSAEIGDLMVVEGSGAYCAGMSTKNYNSFPEAPEVMLAPDGALYLIRRRQTLEQALQNELDLPTSALA 480          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: XP_003084144.2 (Orn/DAP/Arg decarboxylase 2, N-terminal [Ostreococcus tauri] >CEG00730.1 Orn/DAP/Arg decarboxylase 2, N-terminal [Ostreococcus tauri] >OUS45156.1 hypothetical protein BE221DRAFT_193342 [Ostreococcus tauri])

HSP 1 Score: 589.7 bits (1519), Expect = 8.100e-165
Identity = 292/421 (69.36%), Postives = 335/421 (79.57%), Query Frame = 0
Query:   63 EKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTT---SAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNELDLPA 481
            E LRFLT   V  VA   GTPTYVYD  TL A A  A  FPNA+GLTVRYAMKASPNAAILK+F   GLHVDASSGYE +RAMRAG     ISLS+QELPS F E V +GV+INACS+ QL+RFG   PGG++G+RFNPG+GSGGTGKTNVGGPSS+FGIW+ELLP VK +VA ++L+VVR+HTHIGSGSDPAVWQ V+ +SLDL REFP V TLNLGGGYKVGRMSYE STDL  +G PV++ FE FA+ETGRKL LE+EPGTFL+AN+ A+V  +QDK TT     HTFLKLD GMTEVLRPSLYG+QHPL+ + KD T  E  A YVVVGHCCESGDL+TPAP E +TI+ER M   +IGD +V+EGSGAYCAGM++KNYNSFPEAPEVM    G    IRR+QTLDQ L NE+D  A
Sbjct:   41 ETLRFLTANDVVKVAEAHGTPTYVYDAPTLEARAAVAKGFPNAYGLTVRYAMKASPNAAILKIFKKAGLHVDASSGYECERAMRAGFAGDEISLSTQELPSFFPELVEKGVRINACSLDQLERFGAAFPGGEIGVRFNPGLGSGGTGKTNVGGPSSSFGIWYELLPRVKEIVAEYNLKVVRVHTHIGSGSDPAVWQKVSGMSLDLCREFPDVTTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEKFAEETGRKLKLEIEPGTFLLANSCAVVTRVQDKVTTGTAEGHTFLKLDCGMTEVLRPSLYGSQHPLVSVTKDGTLPETQAEYVVVGHCCESGDLMTPAPDEPETISERTMGEVNIGDFIVIEGSGAYCAGMASKNYNSFPEAPEVMRRGAGDMVCIRRKQTLDQILSNEIDYAA 461          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: XP_002501096.1 (predicted protein [Micromonas commoda] >ACO62354.1 predicted protein [Micromonas commoda])

HSP 1 Score: 583.9 bits (1504), Expect = 4.400e-163
Identity = 285/427 (66.74%), Postives = 341/427 (79.86%), Query Frame = 0
Query:   60 EELEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTS----AHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNELDLPASA 483
            +++E LRFLTP+   AV  +FGTPTYVYD++ L   A +A AFPNAFGLTVRYAMKASPNAAILK+F   GLH+DASSGYE+ RA++AG     ISLS+QE P  F E V +G+++NACS+SQL+ +G   PG KVGLRFNPG+GSGGTGKTNVGGPSS+FGIWHELLPE K +V  H L V RIHTHIGSGSDPAVWQ  + +SLDL R+FP V TLNLGGGYKVGRMSYE STDL  +G+PV++ F+ FA+ETGR+L LE+EPGTFL+AN+ A+VC +QDK  TS     H FLKLDAGMTEVLRPSLY AQHPL+ +       ++ ASYVVVGHCCESGDL+TP P +A+ IAER M   DIGDL+VVEG+GAYCAGMS+KNYNSFPEAPEVM  + G  HLIR++QTL+Q L NE++LP +A
Sbjct:    6 DDVETLRFLTPKDCVAVKEKFGTPTYVYDLARLQEQATKAKAFPNAFGLTVRYAMKASPNAAILKVFRKAGLHIDASSGYEVHRAVKAGFQYDQISLSTQEFPDFFPELVDKGLKVNACSLSQLEAYGIMFPGAKVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPEAKEIVERHGLIVDRIHTHIGSGSDPAVWQKTSGMSLDLCRQFPTVETLNLGGGYKVGRMSYEKSTDLQVVGSPVKELFQKFAEETGRELKLEIEPGTFLLANSCAVVCTVQDKVKTSDDADGHVFLKLDAGMTEVLRPSLYAAQHPLVTVSAAGELPKEHASYVVVGHCCESGDLMTPTPDDAEGIAERTMGAVDIGDLLVVEGAGAYCAGMSSKNYNSFPEAPEVMKGADGTMHLIRQKQTLEQILVNEVELPDAA 432          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: XP_001422228.1 (Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901] >ABP00545.1 Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 583.9 bits (1504), Expect = 4.400e-163
Identity = 291/427 (68.15%), Postives = 340/427 (79.63%), Query Frame = 0
Query:   58 SSEELEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKT---TTSAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVM-YASGGIFHLIRRRQTLDQTLQNELDLPA 481
            S+  +E LRFLTPE    VA   GTPTYVYD +TL A A +A AFPNA+GLTVRYAMKASPNAAILK F   GLHVDASSGYE +RAM+AG     ISLS+QELP  F++ V +GV++NACS+ QL+RFG+  PGG+VG+RFNPG+GSGGTGKTNVGGPSS+FGIW E LP VK +V  +DL+VVR+HTHIGSGSDPAVWQ V+ +SLDL REFP V TLNLGGGYKVGRMSYE STDL  +G PV++ FE FA+ETGRKL LE+EPGTFL+AN+ A+V ++QDK    T   HTFLKLD GMTEVLRPSLYG+QHPL+ + K        A YVVVGHCCESGDLLTPAP E +TI+ER+M   +IGD VV+EGSGAYCAGMS+KNYNSFPEAPEVM  A G  F +IRR+QTL+Q L NE+D  A
Sbjct:   45 SASAVETLRFLTPEDARDVAETHGTPTYVYDRATLDAQAARARAFPNAYGLTVRYAMKASPNAAILKTFKKAGLHVDASSGYECERAMKAGFEGGEISLSTQELPRFFEDLVRRGVKVNACSLDQLERFGRAFPGGEVGVRFNPGLGSGGTGKTNVGGPSSSFGIWFESLPRVKEIVEQYDLKVVRVHTHIGSGSDPAVWQKVSGMSLDLCREFPSVDTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEAFAKETGRKLKLEIEPGTFLLANSCAVVTSVQDKVVTGTAEGHTFLKLDMGMTEVLRPSLYGSQHPLVSVSKAGELPAAQADYVVVGHCCESGDLLTPAPDEPETISERRMGEVNIGDYVVIEGSGAYCAGMSSKNYNSFPEAPEVMRLADGAGFAVIRRKQTLEQILANEVDFTA 471          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: XP_003064514.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH51419.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 572.4 bits (1474), Expect = 1.300e-159
Identity = 285/441 (64.63%), Postives = 341/441 (77.32%), Query Frame = 0
Query:   48 VAAADGVYGESSEELEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTSA-----HTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTR-AEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNELDLPASA 483
            +AAA G       E E LRFLT      V    GTPTYVYD +TL A A +AL FPNAFGLTVRYAMKASPNAAILK+F + GL +DASSG+E++RA+RAG   +  SLS+QE P  F+E V +G+++NACS+SQL+ FG   PG ++GLRFNPG+GSGGTGKTNVGGPSS+FGIWHELLPE +A+   H L+VVRIHTHIGSGSDPAVWQ  + +SLDL REFP V TLNLGGGYKVGRM+YE STDL  +GAPV+  FE FA+ETGR+L LE+EPGTFL+AN+ A+VC +QDK TT A     H FLKLDAGMTEVLRPSLY AQHPL+ +     +  E T  YVVVGHCCESGDL+TP P +A+ IAER M   + GDL+VVEG+GAYCAGMS KNYNSFPEAPEVM  + G FH+IR++Q+L+Q + NE++LP  A
Sbjct:    1 MAAASG-----GPERETLRFLTARECVDVRTAHGTPTYVYDAATLKAQAAKALDFPNAFGLTVRYAMKASPNAAILKIFRNAGLKIDASSGHEVRRAVRAGFDHADCSLSTQEFPEFFEELVKKGLKVNACSLSQLEAFGAAFPGAEIGLRFNPGLGSGGTGKTNVGGPSSSFGIWHELLPEARAICEKHGLKVVRIHTHIGSGSDPAVWQKTSGMSLDLCREFPTVETLNLGGGYKVGRMAYEKSTDLAVVGAPVKALFEAFAKETGRELRLEIEPGTFLLANSCAIVCTVQDKVTTGAASDGGHVFLKLDAGMTEVLRPSLYAAQHPLVTVSAATGKEPEGTEKYVVVGHCCESGDLMTPGPDDAEEIAERAMGEVERGDLLVVEGAGAYCAGMSGKNYNSFPEAPEVMRTAEGTFHVIRKKQSLEQIMANEVELPDDA 436          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: XP_007511190.1 (diaminopimelate decarboxylase [Bathycoccus prasinos] >CCO66750.1 diaminopimelate decarboxylase [Bathycoccus prasinos])

HSP 1 Score: 562.0 bits (1447), Expect = 1.800e-156
Identity = 273/426 (64.08%), Postives = 341/426 (80.05%), Query Frame = 0
Query:   54 VYGESSEELEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQD---KTTTSAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNEL 477
            V   SS  +EKLRFL+P+ V+ V  EFGTP YVYD+ TL   A+ A AFPNA+GLTVRYAMKASPN +ILK F + GLH+DASSGYE++RA++AG     ISLS+Q+ P  FD  V +G+++NACS+SQL++FG+K PG ++GLRFNPG+GSGGTGKTNVGGPSS+FGIW+ELLP+ + +VA ++L+V RIHTHIGSGSDPAVWQ V+ +SLDL  +FP V++LNLGGGYKVGRMS E STDL  IG PV+  F++FA+ TGR+L LE+EPGTFL+AN+ ++V   QD     T+  HTF+KLD GMTEVLRPSLYGAQHPLI +      A +T  YVVVGHCCESGDL+TPAP E +TI+ER++   +IGDLVV+EGSGAYCAGMS+KNYN+FPEAPEVM  + G F +IR+RQT+DQ L NE+
Sbjct:  101 VNASSSSSVEKLRFLSPQEVKQVREEFGTPVYVYDLQTLKNQAESAKAFPNAYGLTVRYAMKASPNGSILKTFLNEGLHIDASSGYEVERAVKAGFTYDQISLSTQDFPDFFDRLVEKGLKVNACSLSQLEKFGEKFPGKEIGLRFNPGLGSGGTGKTNVGGPSSSFGIWYELLPKCQELVAKYNLKVERIHTHIGSGSDPAVWQKVSGMSLDLCEKFPDVVSLNLGGGYKVGRMSGEKSTDLSLIGEPVKVAFQEFAKRTGRELKLEIEPGTFLLANSCSVVSTAQDIVETGTSEGHTFIKLDCGMTEVLRPSLYGAQHPLINVTSQGELASKTKKYVVVGHCCESGDLMTPAPDEPETISERELGEINIGDLVVIEGSGAYCAGMSSKNYNTFPEAPEVMKTNEGEFKVIRKRQTVDQILANEV 526          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: XP_009041727.1 (hypothetical protein AURANDRAFT_39321 [Aureococcus anophagefferens] >EGB03577.1 hypothetical protein AURANDRAFT_39321 [Aureococcus anophagefferens])

HSP 1 Score: 544.3 bits (1401), Expect = 3.900e-151
Identity = 270/427 (63.23%), Postives = 324/427 (75.88%), Query Frame = 0
Query:   62 LEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREF-PKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTT----SAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNELDLPASAL 484
            ++ LRFL+P  V      FGTP YVYD  TL A A++ALAFPNAFG+TVRYAMKA PN A+L+LF S+GLH DASS YE++RA+ AG+  S ISLS+Q+L  DF + V +G+++NACS++QL+ FG   PG  VG+RFNPGVGSGGT KTNVGGPSS+FGIWHE   EV A+   HDL VVR+HTHIGSGSD AVWQ V+ +SLDL       V TLNLGGGYKVGRM+YE STDL  +G PV+ +FE +A+ TG +L LEVEPGTFLVANAGALV  IQD T+T    + + FLKLD GMTEVLRPSLYGAQHPL+V+ +D T  ++   YVVVGHCCESGDLLTPAP E +T+A R +  AD GDL+VVE  GAYCA MST  YNSFP APEV++   G FHLIR+R +LDQ   NE+D+  SAL
Sbjct:   37 VDGLRFLSPTGVVKCKEAFGTPCYVYDAPTLVARAEEALAFPNAFGVTVRYAMKACPNGAVLRLFESMGLHFDASSVYEVRRALAAGIAASKISLSTQQLDDDFGDLVKEGLKVNACSLAQLEAFGAAFPGADVGVRFNPGVGSGGTSKTNVGGPSSSFGIWHEDFDEVAAIAGKHDLNVVRVHTHIGSGSDAAVWQRVSRMSLDLCERLGGTVKTLNLGGGYKVGRMAYEQSTDLSVVGEPVKAEFEAYAERTGDELKLEVEPGTFLVANAGALVTTIQDVTSTKGSEAGNDFLKLDCGMTEVLRPSLYGAQHPLVVVKRDGTLNDEHKPYVVVGHCCESGDLLTPAPDEPETLASRDLAAADRGDLMVVESVGAYCAAMSTAGYNSFPSAPEVLHDKDGNFHLIRKRSSLDQLTMNEVDVDLSAL 463          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: PAZ02130.1 (diaminopimelate decarboxylase [Opitutae bacterium AMD-G3])

HSP 1 Score: 537.0 bits (1382), Expect = 6.200e-149
Identity = 261/414 (63.04%), Postives = 320/414 (77.29%), Query Frame = 0
Query:   62 LEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTSAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNE 476
            +E  RFL+P    A+A   GTP YVYD +TL A A   LAFPNA+GLTVR+AMKA PNA++L+LF + GLH+DASSGYE++RA++AGVP   ISLSSQELP DF E +  G+ +NACS+ QL+R G++ PG +VGLRFNPG GSGGTGKTNVGGP S+FGIWHE   + +A+ + H L+VVRIHTHIGSGSDP VWQ V+  SL LV  FP+V+TLNLGGGYKV R++ E  TD   +GAPV++ FE FA   GR L LE+EPGTFLVANAGA++C +QD  +T A  FLKLD+GMTE+LRPSLYG+QHP+ + P + T   +   YVVVGHCCESGDL++ APGE +T+A R +  A  GDLVV+ G+GAYCAGMSTKNYNSFPEAPEV+  +   F L+RRRQTLDQ LQNE
Sbjct:    4 VELHRFLSPAAAAAIAAAHGTPCYVYDQATLEAQADAMLAFPNAYGLTVRFAMKACPNASVLRLFAAKGLHLDASSGYEVRRALKAGVPAERISLSSQELPGDFAELLRLGIHVNACSLLQLERIGKELPGHEVGLRFNPGRGSGGTGKTNVGGPDSSFGIWHEWADQAQAIASKHQLKVVRIHTHIGSGSDPVVWQEVSAASLALVARFPEVVTLNLGGGYKVARVAAEKGTDPQIVGAPVKQAFEKFAAVHGRPLRLEIEPGTFLVANAGAVLCRVQDVVSTGAREFLKLDSGMTEILRPSLYGSQHPVHLYPTNPT--GRVRDYVVVGHCCESGDLISCAPGEPETLATRALPEAAAGDLVVIGGAGAYCAGMSTKNYNSFPEAPEVLLQAQEKFRLVRRRQTLDQILQNE 415          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: PAW85682.1 (diaminopimelate decarboxylase [Opitutae bacterium Tous-C2FEB])

HSP 1 Score: 534.6 bits (1376), Expect = 3.100e-148
Identity = 260/414 (62.80%), Postives = 320/414 (77.29%), Query Frame = 0
Query:   62 LEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTSAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNE 476
            +E  RFL+P    A+A   GTP YVYD +TL A A   LAFPNA+GLTVR+AMKA PNA++L+LF + GLH+DASSGYE++RA++AGVP   ISLSSQELP DF E +  G+ +NACS+ QL+R G++ PG +VGLRFNPG GSGGTGKTNVGGP S+FGIWHE   + +A+ + + L+VVRIHTHIGSGSDP VWQ V+  SL LV  FP+V+TLNLGGGYKV R++ E  TD   +GAPV++ FE FA   GR L LE+EPGTFLVANAGA++C +QD  +T A  FLKLD+GMTE+LRPSLYG+QHP+ + P + T   +   YVVVGHCCESGDL++ APGE +T+A R +  A  GDLVV+ G+GAYCAGMSTKNYNSFPEAPEV+  +   F L+RRRQTLDQ LQNE
Sbjct:    4 VELHRFLSPAAAAAIAAAHGTPCYVYDQATLEAQADAMLAFPNAYGLTVRFAMKACPNASVLRLFAAKGLHLDASSGYEVRRALKAGVPAERISLSSQELPGDFAELLRLGIHVNACSLLQLERIGKELPGHEVGLRFNPGRGSGGTGKTNVGGPDSSFGIWHEWADQAQAIASKYQLKVVRIHTHIGSGSDPVVWQEVSAASLALVARFPEVVTLNLGGGYKVARVAAEKGTDPQIVGAPVKQAFEKFAAVHGRPLRLEIEPGTFLVANAGAVLCRVQDVVSTGAREFLKLDSGMTEILRPSLYGSQHPVHLYPTNPT--GRVRDYVVVGHCCESGDLISCAPGEPETLATRALPEAAAGDLVVIGGAGAYCAGMSTKNYNSFPEAPEVLLQAQEKFRLVRRRQTLDQILQNE 415          
BLAST of NO01G02310 vs. NCBI_GenBank
Match: PHX59167.1 (diaminopimelate decarboxylase [Opitutae bacterium])

HSP 1 Score: 534.6 bits (1376), Expect = 3.100e-148
Identity = 264/414 (63.77%), Postives = 315/414 (76.09%), Query Frame = 0
Query:   62 LEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQALAFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVPPSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGSGSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIGAPVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTSAHTFLKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDLLTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPEVMYASGGIFHLIRRRQTLDQTLQNE 476
            +E  RFL+P    A+A   GTP YVYD +TLTA A   LAFPNAFGLTVR+AMKA PNA++L+LF + GLH+DASSGYE++RA++AGV    +SLSSQELP DF E +  G+Q+NACS+ QL+R GQ  PG  VGLRFNPG GSGGTGKTNVGGP S+FGIWHE   + +A+   + L+VVRIHTHIGSGSDP VWQ V+  SL LV  FP V+TLNLGGGYKV R+S E  TD   +GAPV++ FE FA   GR LHLE+EPGTFLVANAGA++  +QD  +T    FLKLD+GMTE+LRPSLYG+QHP+ + P   T   +   YVVVGHCCESGDL++ APGE +T+A R +  A  GDLVV+ G+GAYCAGMSTKNYNSFPEAPEV+   G  F LIRRRQTLDQ LQNE
Sbjct:    4 VELHRFLSPAAAAAIAAAHGTPCYVYDQATLTAQAAAMLAFPNAFGLTVRFAMKACPNASVLRLFAAQGLHLDASSGYEVRRAIQAGVSAERLSLSSQELPGDFAELLRLGIQVNACSLLQLERIGQAMPGQLVGLRFNPGRGSGGTGKTNVGGPDSSFGIWHEWADQAQAIATKYQLKVVRIHTHIGSGSDPVVWQEVSAASLALVLRFPDVVTLNLGGGYKVARVSTEKGTDPQIVGAPVKQAFEKFAATHGRPLHLEIEPGTFLVANAGAVLSRVQDVVSTGTREFLKLDSGMTEILRPSLYGSQHPVYLYP--ATITGRVRDYVVVGHCCESGDLISCAPGEPETLATRALPEAVAGDLVVIGGAGAYCAGMSTKNYNSFPEAPEVLLLPGEQFRLIRRRQTLDQILQNE 415          
The following BLAST results are available for this feature:
BLAST of NO01G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29202.13.200e-21478.33diaminopimelate decarboxylase [Nannochloropsis gad... [more]
XP_003084144.28.100e-16569.36Orn/DAP/Arg decarboxylase 2, N-terminal [Ostreococ... [more]
XP_002501096.14.400e-16366.74predicted protein [Micromonas commoda] >ACO62354.1... [more]
XP_001422228.14.400e-16368.15Diaminopimelate decarboxylase [Ostreococcus lucima... [more]
XP_003064514.11.300e-15964.63predicted protein [Micromonas pusilla CCMP1545] >E... [more]
XP_007511190.11.800e-15664.08diaminopimelate decarboxylase [Bathycoccus prasino... [more]
XP_009041727.13.900e-15163.23hypothetical protein AURANDRAFT_39321 [Aureococcus... [more]
PAZ02130.16.200e-14963.04diaminopimelate decarboxylase [Opitutae bacterium ... [more]
PAW85682.13.100e-14862.80diaminopimelate decarboxylase [Opitutae bacterium ... [more]
PHX59167.13.100e-14863.77diaminopimelate decarboxylase [Opitutae bacterium][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL002nonsL002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR086ngnoR086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008071NSK008071Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02310.1NO01G02310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100007g92gene1437Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02310.1NO01G02310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02310 ID=NO01G02310|Name=NO01G02310|organism=Nannochloropsis oceanica|type=gene|length=1625bp
ATGGCAGgtgaggactgaatgtttagatggccgtcctttgctttgccgtc
ctttgcttttctcgcgcgctgcataatttcagagtgatcttgcgtggcga
ttgcgccgacctcctaaataaaggacacttttttaccttagctcacatct
taacccctaccctggacacaatcacagCGCCCACCAGCATGCGGGCCCTT
TTGCTTTTGGTGGTCTCCGCGTGCTTGGCCACCGCTTTTTTGCAGCCACA
CTTCTCGTCCTTCGAGGGACGCAGCATCCACAGCCGCAGCATCAGGAGGG
GAGGGTTAATCGTGGCGGCTGCAGACGGTGTCTATGGAGAGTCATCAGAA
GAGCTAGAAAAGCTGCGTTTTCTGACTCCCGAGCTAGTTGAGGCAGTTGC
GAATGAATTTGGCACTCCCACCTACGTGTACGACATGAGCACGCTCACCG
CTAGCGCCAAGCAGGCCCTGGCGTTTCCCAACGCGTTTGGCCTGACAGTG
CGGTACGCGATGAAGGCCAGCCCTAACGCCGCCATCCTGAAGCTATTTAA
TAGCCTGGGTTTGCATGTGGATGCTTCGTCGGGCTATGAGATCAAGCGGG
CCATGCGAGCTGGCGTGCCACCGTCGCACATCAGTTTGTCGTCGCAAGAG
CTGCCGTCTGATTTTGACGAGTACGTGGCGCAGGGCGTGCAGATCAATGC
CTGCTCCATCTCACAGCTGAAGCGTTTCGGGCAAAAGTGTCCAGGAGGGA
AGGTGGGCCTACGCTTCAACCCCGGCGTGGGCTCAGGCGGCACCGGCAAG
ACGAATGTGGGGGGTCCTTCGTCTGCCTTCGGGATATGGCACGAGTTGCT
CCCCGAGGTCAAGGCGGTAGTGGCCACGCACGACCTAGAGGTGGTACGCA
TCCATACCCACATTGGCTCGGGCTCTGATCCGGCCGTGTGGCAGAATGTG
GCAACGTTGTCCTTGGATCTGGTGCGGGAGTTTCCCAAGGTGATGACTCT
GAATCTGGGGGGGGGCTACAAGGTAGGTCGCATGAGCTATGAGGCTTCGA
CAGACTTGCTTAAGATTGGCGCGCCCGTGCAGAAGAAGTTCGAGGACTTT
GCACAAGAGACGGGCCGAAAGCTCCATTTGGAAGTGGAGCCGGGCACATT
TTTGGTGGCCAATGCCGGGGCTTTGGTGTGTGCTATTCAGGACAAGACTA
CCACCAGCGCGCACACTTTCCTGAAGTTGGACGCGGGTATGACCGAGGTC
CTGCGCCCTTCCTTGTATGGGGCGCAACACCCGTTGATTGTGATTCCCAA
GGACAAGACCCGGGCTGAGCAGACAGCATCGTATGTGGTGGTGGGCCACT
GCTGCGAGTCGGGGGATTTGCTCACGCCTGCGCCAGGAGAGGCCGACACG
ATTGCCGAGCGGAAGATGACGGTGGCTGACATTGGGGACTTGGTGGTGGT
GGAAGGCTCGGGAGCCTACTGTGCGGGAATGAGCACCAAAAACTATAACT
CCTTTCCGGAAGCTCCCGAGGTGATGTATGCGTCTGGTGGCATTTTCCAC
CTCATCCGCCGGCGGCAGACACTGGATCAGACCCTTCAAAATGAGCTTGA
TTTGCCTGCCAGCGCACTTTCTTGA
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protein sequence of NO01G02310.1

>NO01G02310.1-protein ID=NO01G02310.1-protein|Name=NO01G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bp
MAAPTSMRALLLLVVSACLATAFLQPHFSSFEGRSIHSRSIRRGGLIVAA
ADGVYGESSEELEKLRFLTPELVEAVANEFGTPTYVYDMSTLTASAKQAL
AFPNAFGLTVRYAMKASPNAAILKLFNSLGLHVDASSGYEIKRAMRAGVP
PSHISLSSQELPSDFDEYVAQGVQINACSISQLKRFGQKCPGGKVGLRFN
PGVGSGGTGKTNVGGPSSAFGIWHELLPEVKAVVATHDLEVVRIHTHIGS
GSDPAVWQNVATLSLDLVREFPKVMTLNLGGGYKVGRMSYEASTDLLKIG
APVQKKFEDFAQETGRKLHLEVEPGTFLVANAGALVCAIQDKTTTSAHTF
LKLDAGMTEVLRPSLYGAQHPLIVIPKDKTRAEQTASYVVVGHCCESGDL
LTPAPGEADTIAERKMTVADIGDLVVVEGSGAYCAGMSTKNYNSFPEAPE
VMYASGGIFHLIRRRQTLDQTLQNELDLPASALS*
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Synonyms
Publications