NO01G02250, NO01G02250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02250 vs. NCBI_GenBank
Match: ETP51453.1 (hypothetical protein F442_03425 [Phytophthora parasitica P10297]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVA 158 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G + +T + S ++ V+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINRIYNDKAFYDEDGFSGAVTSSSTAKSNSSPRAKAAPVS 153
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_008871380.1 (hypothetical protein H310_07416 [Aphanomyces invadans] >ETV99962.1 hypothetical protein H310_07416 [Aphanomyces invadans]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 0 Query: 15 LEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLR---PDDPLDKVKAFVNDAYNHNRYWKE 131 L +R++ NK C NCD + GH N+C KF+TFVCN CKSAHQS+SHR KS+++SNW+ +V L + GGGNA AR TWL + +R D LD K F+N YN ++ + Sbjct: 8 LNTLRKLDANKACANCDTVAKFGHGNICEKFKTFVCNHCKSAHQSYSHRVKSVTMSNWSKEDVDALKEENGGGNAAARRTWLATWEDGRSMRKPLETDHLDVFKKFINAVYNDKAFYSD 126
BLAST of NO01G02250 vs. NCBI_GenBank
Match: ETL46912.1 (hypothetical protein L916_03291 [Phytophthora parasitica] >ETM00039.1 hypothetical protein L917_03213 [Phytophthora parasitica]) HSP 1 Score: 117.1 bits (292), Expect = 1.600e-22 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSS 152 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G A T P + S+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINRIYNDKAFYDEDGFSG-----AVTSSPTAKSN 142
BLAST of NO01G02250 vs. NCBI_GenBank
Match: KUF77398.1 (ADP-ribosylation factor GTPase-activating protein AGD14 [Phytophthora nicotianae]) HSP 1 Score: 117.1 bits (292), Expect = 1.600e-22 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSS 152 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G A T P + S+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINRIYNDKAFYDEDGFSG-----AVTSSPTAKSN 142
BLAST of NO01G02250 vs. NCBI_GenBank
Match: KUF96656.1 (hypothetical protein AM588_10006265 [Phytophthora nicotianae]) HSP 1 Score: 117.1 bits (292), Expect = 1.600e-22 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSS 152 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G A T P + S+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINRIYNDKAFYDEDGFSG-----AVTSSPTAKSN 142
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_002900022.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60649.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 116.3 bits (290), Expect = 2.800e-22 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAG 136 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG +P DDPLD K FVN YN ++ E +G Sbjct: 5 AEAALNTLKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGCWDESQMRKPTKDDPLDYYKQFVNRVYNDKAFYDEDGFSG 131
BLAST of NO01G02250 vs. NCBI_GenBank
Match: OLP86398.1 (putative ADP-ribosylation factor GTPase-activating protein AGD14 [Symbiodinium microadriaticum]) HSP 1 Score: 115.5 bits (288), Expect = 4.700e-22 Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 0 Query: 8 EKRAKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRPDDPLDKVKAFVNDAYNHNRY 128 +K ++ L++IRR+P N+ C NC KE G + VCT F+TF+C+ CKSAHQSFSHRCKSI +S WT EV L D GGGNA A +LGK+ R++ L+ K F+ AY R+ Sbjct: 22 DKATEKELQRIRRLPENRVCPNCLKEESLGFSAVCTTFKTFICHDCKSAHQSFSHRCKSIQMSVWTLEEVKALDDCNGGGNAAAVRKYLGKVTPKDRVKQGSTLELYKRFIQRAYVDQRW 141
BLAST of NO01G02250 vs. NCBI_GenBank
Match: OWZ09148.1 (hypothetical protein PHMEG_00018197, partial [Phytophthora megakarya]) HSP 1 Score: 115.2 bits (287), Expect = 6.200e-22 Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVAFT 160 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P +DPLD K F+N YN ++ E G N+ ++ P +S + A T Sbjct: 3 AEAALNALKKLEVNKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMYEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKNDPLDYYKQFINRVYNDRAFYDED---GFNAAPSSPNSPSPKTSSRATPAVT 150
BLAST of NO01G02250 vs. NCBI_GenBank
Match: OAO16025.1 (NSP (nuclear shuttle protein)-interacting GTPase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 114.0 bits (284), Expect = 1.400e-21 Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 0 Query: 7 EEKRAKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWL--GKLQGHLRLRPDDPLDKVKAFVNDAYNHNRYWKEKE 133 ++++ ++LL +IR++ NK CVNC + + GH NVC + +FVC+ CKSAHQSFSHR KS+++S WT EV LS+ GGGN + WL G ++ + R +P D LDK K FV AY + + E Sbjct: 5 KKQKPEELLAKIRKIEENKYCVNCGEYAKLGHTNVCVPYSSFVCHMCKSAHQSFSHRVKSVTMSTWTLKEVRALSEKHGGGNKCCKAKWLATGDVEKY-RPKPGDSLDKYKNFVRMAYEEKMFMAKDE 131
BLAST of NO01G02250 vs. NCBI_GenBank
Match: CCA20004.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA23283.1 conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21 Identity = 83/238 (34.87%), Postives = 113/238 (47.48%), Query Frame = 0 Query: 9 KRAKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEK--------EAAGTNSYVATTER---PGSVSSELESVAFTQQRRQQ-------REGMLSTSTTKFPHVRADTAPTPVAAPVVTDLLDFFGDFTQATLPSVT------PSHRPIV 221 K ++ L IR++ NK CVNC + GH NVC F+TF C+ CKSAHQSFS R K S+SNWT EV L + GGGN NAR W G+ +L RP D L+ K+F++ YN ++ + NS +TER P + + L AF+ + R E + S S T+ A T+ + + FGDF AT S + PS P+V Sbjct: 3 KTPEEQLNAIRKLEGNKSCVNCGSYNKFGHPNVCEPFKTFTCSQCKSAHQSFSMRVKHYSMSNWTADEVEALKEENGGGNINARRVWFGRWDENLMRRPTEKDNLEYFKSFIDKVYNQRAFYDHNGHKASSPLTLSQQNSVKKSTERSIAPPPIENLLPCDAFSSEARPAAIDFNAFTEPIASKSHTQGNDWSAFTSSVEPS--------EAFGDFFAATTSSTSSVNPPFPSFDPVV 232 The following BLAST results are available for this feature:
BLAST of NO01G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02250 ID=NO01G02250|Name=NO01G02250|organism=Nannochloropsis oceanica|type=gene|length=4275bpback to top protein sequence of NO01G02250.1 >NO01G02250.1-protein ID=NO01G02250.1-protein|Name=NO01G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bpback to top Synonyms
Publications
|