NO01G02250, NO01G02250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02250 vs. NCBI_GenBank
Match: EWM29114.1 (adp-ribosylation factor gtpase-activating protein agd14 [Nannochloropsis gaditana]) HSP 1 Score: 212.2 bits (539), Expect = 3.700e-51 Identity = 199/527 (37.76%), Postives = 249/527 (47.25%), Query Frame = 0 Query: 2 VTTAAEEKRAKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRPDDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVAFTQQR----RQQREGMLS----TSTTK-FPHVRADTAPTPVAAPVVTDLLDFFGDFTQATLPSVTPSHRPIVDASHGTARPPSGGAGDFAFQTGKGNSNSGIVSSAAPRASPSYSPVPTGPPPQADDWQHFGPTVASSSVPGDSTFFATSAVV--PASNFYDCTN-GSAFG-FMSSGPSATPHHNEFCDFAAASVPPCPTGRQQPLTCTAPPPRPVPPAMRLTRPLIEDPFEVLAPPQQPSFSSASSNLYIPSQQPHPWGPMPASAMLLMKSGDGSLQANRTSGDGGCGSGRNPHRPSHMQTQPPRPSDPQMPM-MTMNGGGAASGPPRRFLPSQGMVGGPRPHIPVYGQHQQQQYSSQASDPFAGLDWRK 515 + A++KR K LLEQIRR+PHNK CVNC K SIAGH ++C KF TF+C+TCKSAHQSFSHRCK+++LSNWT EV LSD AGGGN NAR TWLGKL G L LRP D L VK FVNDAYNH RYWK+ + ++ VA G+ S+ + + +Q + EG +S ST K + +D PT A T L AT+ S T + P +G G QTG AP++S S T PQ D Q FG + + S P + T T A + P S+ N FG FMSS PS + + S+ P P TAP PR P+M R EDPF +LAP + S S+L+ +Q+ HP G PA + G G L S + H QP Q+P+ M MN GA +G QQ +SQ DPFA LDWRK Sbjct: 1 MAATADDKRIKLLLEQIRRLPHNKSCVNCGKVSIAGHGDICIKFLTFLCHTCKSAHQSFSHRCKNVTLSNWTLAEVQQLSDQAGGGNQNARQTWLGKLDGTLLLRPGDSLQDVKNFVNDAYNHKRYWKDPQMIAKSTSVAA---EGTQSASASTASLPRQSIGGIGSRLEGPMSEIPDASTVKNLLDLESDCIPTGPARSFPTLL-------EPATVTSCTQFSERVARNGLSDRCPLTGSVG----QTG------------APKSSSSLMCTSTIAAPQPQDMQ-FGDFLGAFS-PSNPTPGRTPAALAQPGSHSNQALNLNDDFGEFMSSPPS------QGLSMSTQSMRPVP--------LTAPQPR---PSMVAPRVQPEDPFAMLAPDRPTLASIPLSHLH--AQKMHPVGLAPACVI-----GSGVLAPQVFSINA-----------PHSSFQP-----GQVPLHMVMNATGA------------------------HGWKAGQQCTSQEPDPFADLDWRK 435
BLAST of NO01G02250 vs. NCBI_GenBank
Match: OQS06247.1 (hypothetical protein THRCLA_20414 [Thraustotheca clavata]) HSP 1 Score: 129.4 bits (324), Expect = 3.200e-26 Identity = 65/129 (50.39%), Postives = 82/129 (63.57%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLR---PDDPLDKVKAFVNDAYNHNRYWKEKEAAGT 137 A+ L +R++ NK C NCD S GH+NVC KF+TFVCN CKSAHQS+SHR KS+++SNWT EV L + GGGNA AR TW GK + +R +D LD K F+N AYN ++ E A T Sbjct: 2 AEGALNILRKLEANKACANCDTISKFGHSNVCDKFKTFVCNNCKSAHQSYSHRVKSVTMSNWTKEEVDALKEENGGGNAVARRTWFGKWEDGRSMRKPAENDHLDVFKRFINAAYNEKAFYTEYNAKTT 130
BLAST of NO01G02250 vs. NCBI_GenBank
Match: OQR92097.1 (hypothetical protein ACHHYP_04058 [Achlya hypogyna]) HSP 1 Score: 128.3 bits (321), Expect = 7.100e-26 Identity = 63/126 (50.00%), Postives = 81/126 (64.29%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLR---PDDPLDKVKAFVNDAYNHNRYWKEKEA 134 A+ +L IR++ NK C NCD + GH+NVC KF+TFVCN CKSAHQS+SHR KS+++SNWT EV L + GGGNA AR TWLG + +R D +D K F+N AYN ++ E A Sbjct: 2 AEAVLNTIRKLEANKACANCDTIAKFGHSNVCDKFKTFVCNNCKSAHQSYSHRVKSVTMSNWTMEEVDALKEENGGGNAVARRTWLGAWEEGRSMRKPTESDHVDVFKRFINAAYNDRAFYSENSA 127
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_012206370.1 (hypothetical protein SPRG_11778 [Saprolegnia parasitica CBS 223.65] >KDO22934.1 hypothetical protein SPRG_11778 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 125.6 bits (314), Expect = 4.600e-25 Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLR---PDDPLDKVKAFVNDAYNHNRYWKE 131 A+ L IR++ NK C NCD + GH+N+C KF+TFVCN CKSAHQS+SHR KS+++SNWT EV L + GGGNA AR TWLG + +R D +D K F+N YN ++ E Sbjct: 2 AEAALNTIRKLEANKACANCDAVAKFGHSNICEKFKTFVCNNCKSAHQSYSHRVKSVTMSNWTKDEVDALKEENGGGNAVARRTWLGAYEDGRSMRKPTESDHVDVFKRFINTVYNDRAFYAE 124
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_009839927.1 (hypothetical protein H257_13931 [Aphanomyces astaci] >ETV70544.1 hypothetical protein H257_13931 [Aphanomyces astaci]) HSP 1 Score: 124.8 bits (312), Expect = 7.800e-25 Identity = 68/151 (45.03%), Postives = 88/151 (58.28%), Query Frame = 0 Query: 14 LLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQ---GHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVAFT 160 LL +R++ NK C NCD + GH N+C KF+TFVCN CKSAHQS+SHR KS+++SNWT +V L + GGGNA AR TWL + G +P D LD K F+N YN Y+ E AA ++S VSS + + A T Sbjct: 7 LLNTLRKLDANKACANCDAVAKFGHGNICEKFKTFVCNHCKSAHQSYSHRVKSVTMSNWTREDVDALKEEHGGGNALARRTWLASWKDGDGRSLRKPLETDHLDVFKKFINAVYNDKAYFSEPNAAPSSSRPXXXXXXXHVSSIVSTHAST 157
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_008619541.1 (hypothetical protein SDRG_15155 [Saprolegnia diclina VS20] >EQC27041.1 hypothetical protein SDRG_15155 [Saprolegnia diclina VS20]) HSP 1 Score: 124.0 bits (310), Expect = 1.300e-24 Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLR---PDDPLDKVKAFVNDAYNHNRYWKE 131 A+ L IR++ NK C NCD + GH+N+C KF+TFVCN CKSAHQS+SHR KS+++SNWT EV L + GGGNA AR TWLG + +R D +D K F+N YN ++ E Sbjct: 25 AEAQLNTIRKLEANKACANCDALAKFGHSNICEKFKTFVCNNCKSAHQSYSHRVKSVTMSNWTKDEVDALKEENGGGNAVARRTWLGAYEDGRSMRKPTESDHVDVFKRFINAVYNDRAFFAE 147
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_009525539.1 (hypothetical protein PHYSODRAFT_350978 [Phytophthora sojae] >EGZ16481.1 hypothetical protein PHYSODRAFT_350978 [Phytophthora sojae]) HSP 1 Score: 118.6 bits (296), Expect = 5.600e-23 Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKL-QGHLRL-RPDDPLDKVKAFVNDAYNHNRYWKEKEAA 135 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +G +R DDPLD K F+N YN ++ E A+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAAAARVWLGRWDEGQMRKPTKDDPLDYYKQFINHVYNDKAFYDEDGAS 130
BLAST of NO01G02250 vs. NCBI_GenBank
Match: ETI53642.1 (hypothetical protein F443_03453 [Phytophthora parasitica P1569] >ETM53216.1 hypothetical protein L914_03299 [Phytophthora parasitica] >ETO85652.1 hypothetical protein F444_00735 [Phytophthora parasitica P1976]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVA 158 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G + +T + S ++ V+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINRIYNDKAFYDEDGFSGAVTSSSTAKSNSSPRAKAAPVS 153
BLAST of NO01G02250 vs. NCBI_GenBank
Match: ETK93517.1 (hypothetical protein L915_03322 [Phytophthora parasitica] >ETP23450.1 hypothetical protein F441_03437 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 62/143 (43.36%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSS 152 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G A T P + S+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINHIYNDKAFYDEDGFSG-----AVTSSPTAKSN 142
BLAST of NO01G02250 vs. NCBI_GenBank
Match: XP_008916275.1 (hypothetical protein PPTG_19546 [Phytophthora parasitica INRA-310] >ETM98429.1 hypothetical protein PPTG_19546 [Phytophthora parasitica INRA-310]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 0 Query: 11 AKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRP--DDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVA 158 A+ L ++++ NK CVNC + GH N+C K +TFVC+ CKSAHQS+S R KS+S+SNWT EV L + GGGNA A WLG+ +P DDPLD K F+N YN ++ E +G + +T + S ++ V+ Sbjct: 5 AEAALNALKKLEANKTCVNCGNYNRFGHQNICEKVRTFVCSNCKSAHQSYSMRVKSVSMSNWTMDEVDALREQNGGGNAVAARVWLGRWDESQMRKPTKDDPLDYYKQFINRIYNDKAFYDEDGFSGAVTSSSTAKSNSSPRAKAAPVS 153 The following BLAST results are available for this feature:
BLAST of NO01G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02250 ID=NO01G02250|Name=NO01G02250|organism=Nannochloropsis oceanica|type=gene|length=4275bpback to top protein sequence of NO01G02250.1 >NO01G02250.1-protein ID=NO01G02250.1-protein|Name=NO01G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bpback to top Synonyms
Publications
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