NO01G02110, NO01G02110 (gene) Nannochloropsis oceanica

Overview
NameNO01G02110
Unique NameNO01G02110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1350
Alignment locationchr1:538436..539785 +

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Properties
Property NameValue
DescriptionSerine racemase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:538436..539785 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
Homology
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_021271082.1 (serine racemase isoform X1 [Numida meleagris])

HSP 1 Score: 288.1 bits (736), Expect = 3.900e-74
Identity = 171/330 (51.82%), Postives = 217/330 (65.76%), Query Frame = 0
Query:   29 IRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTV--------TDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTP---PPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            +R  VHRTPVL C A+E           +  R L FKCELFQ+TGSFK+RGALNAV  L              VVTHSSGNH QALA AAR +G+ A+IV+PRTAP  K  A++ YG  +  CEP+ E+R   AA +V  TGG +VHP+ +  V+AGQGT+ALE LEQV       E++AL++P+GGGG++ G+AVA K +RPD+K+  AEP   DD  +SK  G L    TP    P +IAD + T +G+ T+PI+  D VD +LTVSE EI RA RLV+ERMKL+IEP+AGVGVA  LS ++  AV   E   V IVLCGGNVD+S +
Sbjct:   16 LRGCVHRTPVLTCGALE----------RLAGRRLLFKCELFQRTGSFKIRGALNAVRSLVEEAERAGRERPRAVVTHSSGNHGQALACAAREEGIPAYIVVPRTAPCCKQAAIRAYGATLVPCEPSDESRAETAARVVQETGGIMVHPNQEPAVIAGQGTIALEVLEQV------PEVNALVVPVGGGGMIAGIAVAVKALRPDVKVFAAEPRNADDCYQSKLRGEL----TPNRHTPDTIADAVKTSIGENTWPII-RDLVDDVLTVSEEEIKRATRLVWERMKLLIEPTAGVGVAAVLS-EQFQAV-PREVENVCIVLCGGNVDLSSL 322          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: NP_001120018.1 (serine racemase [Xenopus tropicalis] >XP_012811883.1 PREDICTED: serine racemase isoform X1 [Xenopus tropicalis] >AAI58318.1 LOC100144980 protein [Xenopus tropicalis] >OCA43919.1 hypothetical protein XENTR_v90004304mg [Xenopus tropicalis])

HSP 1 Score: 287.3 bits (734), Expect = 6.700e-74
Identity = 156/328 (47.56%), Postives = 218/328 (66.46%), Query Frame = 0
Query:   22 IQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPT-VTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEME 349
            +QDA   I+ L+H TP++   ++           ++  R+LFFKCEL QKTGSFK+RGALNAV +LP      VVTHSSGNH QALA AA+ +G+ AH+V+PRTA + K  A+  YG ++  CEP  ++R  +AA+ V   GG LVHP+ D  V+AGQGT+ALE L+QV       E++AL++P+GGGG+L G+ +AAK ++P++KI  AEP   DD  RSK  G L  +   PP +IAD + T +G  T+PI+  D VD +L +SE EI  A RLV+ER+KL+IEP+AG+G+A  L+      V G   + +G+VLCGGN+D++  E
Sbjct:   12 VQDAQANIQGLIHTTPIITSSSLN----------ALAGRKLFFKCELLQKTGSFKIRGALNAVKNLPANEPVAVVTHSSGNHGQALALAAQMRGIPAHVVVPRTAASCKKAAISAYGAQIIECEPNDKSRTEVAAQTVNDVGGILVHPNQDPAVIAGQGTIALEVLQQV------PEIEALVVPVGGGGMLAGITIAAKAIKPEVKIFAAEPLNADDCYRSKINGQLTPN-LKPPTTIADSVKTSIGPNTWPII-RDLVDDVLVISEEEIKAATRLVWERLKLLIEPTAGLGLAAVLT-THFQEVAG-NIQNIGVVLCGGNIDLASAE 319          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_013756166.1 (hypothetical protein AMSG_12086 [Thecamonas trahens ATCC 50062] >KNC51474.1 hypothetical protein AMSG_12086 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 287.3 bits (734), Expect = 6.700e-74
Identity = 179/342 (52.34%), Postives = 215/342 (62.87%), Query Frame = 0
Query:   12 GLDTKLD-LPL----IQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVK-GYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            GL   +D LP+    ++ A   +RP VH TPVL   A     L+AA  V     ELFFK E  QKTGSFK+RGA NA+A   P    VVTHSSGNHAQALA AA+A  + A+I MP TAP +K+ AVK  Y   V  CEPT  AR A AA LV       VHPSDD  V+AGQGT+ALE L        G  LDAL++P+GGGGL+ G++VAAK ++P IK++GAEPA  DDAARS   G    H T P  ++ADGL T LG  T+ IV S+ VD I TV E  I   MR+V+ERMK+VIEPSAGVGVAV LS +           RVG+VLCGGN D+  +
Sbjct:  421 GLSAAVDALPVNLGDVKAALARVRPHVHHTPVLTSSA-----LSAAAGV-----ELFFKTEAMQKTGSFKIRGATNALASADPRPPAVVTHSSGNHAQALAAAAQALSIPAYIAMPSTAPKIKMMAVKETYQANVVECEPTGAARAATAAALVEEHSALFVHPSDDVAVIAGQGTLALELLLD-DMPAAGATLDALVVPVGGGGLISGVSVAAKGLQPHIKVLGAEPAAADDAARSLVAGERLGHETEPVTTVADGLKTTLGPNTWAIV-SNLVDHIFTVPEDAIIAGMRMVWERMKVVIEPSAGVGVAVVLSDEFRAYAAEHGIERVGVVLCGGNADVDNL 750          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_012759227.1 (hypothetical protein SAMD00019534_003400, partial [Acytostelium subglobosum LB1] >GAM17165.1 hypothetical protein SAMD00019534_003400, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73
Identity = 160/329 (48.63%), Postives = 217/329 (65.96%), Query Frame = 0
Query:   22 IQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHL--PPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGME--CRRVGIVLCGGNVDISE 347
            I++A   I+P +H+TPVL CQ+I            +  +ELFFKCE FQK G+FK RGA N+V  L        V THSSGNH QALA AAR +   A++V+P+ AP +K+ A+ GYG  V+LCEPT++AR +    L+   G  ++HP D+ +V+AGQGTVA+E L QV      E LDA+I+PIGGGG++ G+ +AAKT+ PDIKIIGAEP   DDA RS   GV   H    P +IADGLLT +G  TFPI+ S  V +I+TV + EI  AM+LV++RMK++IEPS+   +AV LS +K     G +   +R+G+V+ GGNVD+ +
Sbjct:   32 IKEAYERIKPHIHKTPVLTCQSIN----------EIAGKELFFKCENFQKVGAFKFRGACNSVFKLSEDDLKRGVTTHSSGNHGQALALAARMRNTTAYVVVPKNAPKIKLDAIIGYGANVHLCEPTLQARESGVEALIAQHGCKMIHPFDNADVIAGQGTVAIELLSQV------ENLDAIIVPIGGGGVMSGVTIAAKTINPDIKIIGAEPLGADDAFRSFEKGVKLPHRDNNPNTIADGLLTTVGDLTFPIIKS-HVHSIITVDDNEIKAAMKLVWDRMKIIIEPSSATVLAVVLS-EKFKEKYGNDGKVKRIGLVITGGNVDLEK 342          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_005298329.1 (serine racemase isoform X1 [Chrysemys picta bellii])

HSP 1 Score: 285.8 bits (730), Expect = 2.000e-73
Identity = 164/341 (48.09%), Postives = 221/341 (64.81%), Query Frame = 0
Query:   17 LDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTD-------VVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTP---PPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            + L  ++ A  ++  L+H TP+L C +++           +    LFFKCELFQKTGSFKVRGALNAV  L             VVTHSSGNH QALA+AA+ +G+ A++V+PRTAP  K  A+  YG ++ LCEPT E+R  +AA  V    G +VHP+ D  V+AGQGT+ALE L+QV       +++AL++P+GGGG++ G+AVA K +RPDI++  AEP   DD  RSK TG L    TP   PP +IAD + T +G  T+PI+  D VD +LTV+E EI +A +LV+ERMKL+IEP+AGVGVA  LS  +    +  E + V IVLCGGNVD+  +
Sbjct:    7 ISLADVEAAQSSLHGLIHLTPILTCSSLD----------ELAGHRLFFKCELFQKTGSFKVRGALNAVRSLVHAAQGDREQPKAVVTHSSGNHGQALAFAAKVEGIPAYVVVPRTAPVCKKAAICSYGARLILCEPTDESRVEVAARTVQEKEGVMVHPNQDPAVIAGQGTIALEVLQQV------PQVNALVVPVGGGGMVAGIAVAVKALRPDIRVYAAEPCNADDCYRSKVTGEL----TPNRHPPDTIADSVKTSIGPNTWPII-KDLVDDVLTVTEAEIQQATQLVWERMKLLIEPTAGVGVAAVLS--EQFCSVSQEVKNVCIVLCGGNVDLGTL 324          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: PTQ29617.1 (hypothetical protein MARPO_0138s0043 [Marchantia polymorpha])

HSP 1 Score: 284.6 bits (727), Expect = 4.300e-73
Identity = 170/348 (48.85%), Postives = 220/348 (63.22%), Query Frame = 0
Query:    7 TDHCSGLDTK-----LDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVT--DVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            T   +GLD K       L  I +A   I+P  H TPVL C +++          ++  R L FKCE FQK G+FK RGA NAV  LP  +    VVTHSSGNHA ALA AA+ +G+ AHIV+PR APA K+  V+ YGGKV  CEP +++R   A  +  STG  LV P +D  VM+GQGTVA+EFLEQV       +LDA+ +PI GGGL  G+A+AAK ++P IKI  AEP   DDAA+SKA+G +         +IADGL T LG  T+P+V  D V+ ++TVSE EI  AM+L YER+K+V+EPSA VG+A  LS K  +    + C+ +GIVL GGNVD+  +
Sbjct:    5 TQDTAGLDLKEEKYAASLSSILEARTRIQPYAHITPVLTCSSLD----------ALAGRSLHFKCENFQKGGAFKFRGACNAVFSLPDEIAKQGVVTHSSGNHAAALALAAQIRGIPAHIVVPRNAPACKIANVERYGGKVVTCEPNIQSREETAQRVQESTGAVLVLPFNDGRVMSGQGTVAVEFLEQV------PDLDAIFVPISGGGLTSGVALAAKALKPSIKIFAAEPKGADDAAQSKASGEIV--TLKYVSTIADGLRTFLGNLTWPVV-RDLVEDVITVSESEIVDAMKLCYERLKVVVEPSAVVGLAAVLSKKFQDDPNCIHCKNIGIVLTGGNVDLDTL 333          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_007057757.1 (PREDICTED: serine racemase [Chelonia mydas] >EMP37819.1 Serine racemase [Chelonia mydas])

HSP 1 Score: 283.5 bits (724), Expect = 9.700e-73
Identity = 162/335 (48.36%), Postives = 222/335 (66.27%), Query Frame = 0
Query:   22 IQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTD-------VVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLC--LHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            ++ A  +++ L+H TP+L   +++           +    LFFKCELFQKTGSFK+RGALNAV  L             VVTHSSGNH QALA+AA+ +G+ A++V+PRTAP  K  A+  YG ++ LCEPT E+R  +AA+ V    G LVHP+ D  V+AGQGT+ALE L+QV       +++AL++P+GGGG++ G+AVA K +RPDI++  AE    DD  RSK TG L   LH   PP +IADG+ T +G  T+PI+  D VD +LTV+E EI +A +LV+ERMKL+IEP+AGVGVA  LS ++  +V   E + + IVLCGGNVD+  +
Sbjct:   12 VEAAQTSLQGLLHLTPILTSSSLD----------ELAGHRLFFKCELFQKTGSFKIRGALNAVRSLVRAAQGDREQPKAVVTHSSGNHGQALAFAAKVEGVPAYVVVPRTAPLCKKAAICSYGARLILCEPTDESRVEVAAQTVQEKEGVLVHPNQDPAVIAGQGTIALEVLQQV------PQINALVVPVGGGGMVAGIAVAVKALRPDIRVYAAETCNADDCYRSKVTGELTPNLH---PPDTIADGVKTSIGPNTWPII-KDLVDDVLTVTEEEIQQATQLVWERMKLLIEPTAGVGVAAVLS-EQFRSV-SQEMKNICIVLCGGNVDLGSL 324          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: CDH52966.1 (serine racemase [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 283.1 bits (723), Expect = 1.300e-72
Identity = 169/335 (50.45%), Postives = 217/335 (64.78%), Query Frame = 0
Query:   15 TKLDLPLIQDAAMTIRPLVHRTPVLRCQAIET-ESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPT--VTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGME-CRRVGIVLCGGNVDIS 346
            T + +  IQ AA  I   VHRTPV+ C  ++T  S A  +SV     +L FKCE  QKTGSFK+RGA NAV  L  T   + VVTHSSGNHAQALA+AAR +G+ AH+VMPR AP  K  AV+GYG  V  CE T   R  +A E++  TG   +HP ++ NV+AGQGT+ALE + QV E   G  LDA++IP+GGGG++ G AVAAK + P  ++ GAEP  VDD  RS       L   P  +S+AD LL  LG+  F I+ S+ VD I TV+E +I RAM LV+ RMKL IEPSA V VAVAL   + + ++  +  +R+ IVLCGGNVD++
Sbjct:    2 TNITIEDIQAAAARIN--VHRTPVITCSTLDTVVSEATDNSV-----QLLFKCEALQKTGSFKIRGASNAVQLLSDTDAASGVVTHSSGNHAQALAYAARQRGIEAHVVMPRNAPVTKKAAVRGYGANVIECEATQADRERVANEVMRKTGATFIHPYNNPNVIAGQGTIALETIAQVGELLKGAPLDAMLIPVGGGGMISGCAVAAKALSPGTRVYGAEPQAVDDCHRSYQEKKR-LANKPGTQSVADALLADLGEIAFGII-SESVDGIFTVTEEQIVRAMGLVWTRMKLCIEPSAAVAVAVALYNTEFHQIIRQQNLQRIAIVLCGGNVDVA 327          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_024050127.1 (serine racemase [Terrapene mexicana triunguis] >XP_024050128.1 serine racemase [Terrapene mexicana triunguis])

HSP 1 Score: 282.7 bits (722), Expect = 1.700e-72
Identity = 162/341 (47.51%), Postives = 220/341 (64.52%), Query Frame = 0
Query:   17 LDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTD-------VVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTP---PPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            + L  ++ A  ++  L+H TP+L   +++           +    LFFKCELFQKTGSFK+RGALNAV  L             VVTHSSGNH QALA+AA+ +G+ A++V+PRTAP  K  A+  YG ++ LCEPT E+R  +AA  V    G +VHP+ D  V+AGQGT+ALE L+QV       +++AL++P+GGGG++ G+AVA K +RPDI++  AEP   DD  RSK TG L    TP   PP +IAD + T +G  T+PI+  D VD +LTV+E EI +A +LV+ERMKL+IEP+AGVGVA  LS  +    +  E + V IVLCGGNVD+  +
Sbjct:    7 ISLADVEAAQSSLHGLIHLTPILTSSSLD----------ELAGHRLFFKCELFQKTGSFKIRGALNAVRSLVRAAQGDREQPKAVVTHSSGNHGQALAFAAKVEGIPAYVVVPRTAPLCKKAAICSYGARLILCEPTDESRMEVAARTVQEKEGVMVHPNQDPAVIAGQGTIALEVLQQV------PQVNALVVPVGGGGMIAGIAVAVKALRPDIRVYAAEPCNADDCYRSKVTGEL----TPNRHPPDTIADSVKTSIGPNTWPII-KDLVDDVLTVTEEEIQQATQLVWERMKLLIEPTAGVGVAAVLS--EQFCSVSQEVKNVCIVLCGGNVDLGTL 324          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: OAD03159.1 (hypothetical protein MUCCIDRAFT_110015 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 282.3 bits (721), Expect = 2.200e-72
Identity = 169/323 (52.32%), Postives = 211/323 (65.33%), Query Frame = 0
Query:   33 VHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHL--PPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGME-CRRVGIVLCGGNVDISEMEEVWR 353
            VHRTPV  C A+    LA+  +  V   ELFFKCELFQKTGSFK RGA NAVA L        VVTHSSGNHAQALA AAR +G+ A+IVMP T P +K  AV G+G  +  CEP    R   A E+   T   L+HP ++ NV+AGQGT+ALE L QVK      +LDA++IP+GGGG+L GM++AAK ++P IK+  AEPA VDD  RS        +     +S+ADGLLT LG   F  +  + VD + TVSE+EI  AM LV+ RMKL IE SAGVGVAVAL  K+   V+  E  +R+GIVLCGGNVD+ +  E+++
Sbjct:   18 VHRTPVQTCTAL--NDLASEPNAPV---ELFFKCELFQKTGSFKFRGASNAVALLSDQEATHGVVTHSSGNHAQALALAARNRGIPAYIVMPTTTPDIKKAAVLGFGANIIECEPIQAVREKTAEEVRSKTNATLIHPFNNPNVIAGQGTIALELLSQVK------DLDAILIPVGGGGMLTGMSIAAKALKPGIKVFAAEPAAVDDTYRSFTNRERATNEV--AKSVADGLLTNLGDIAFSEIHKN-VDGVFTVSEKEIIHAMELVWGRMKLCIEASAGVGVAVALYNKEFKQVVKKEGIKRIGIVLCGGNVDLVKATELFQ 326          
The following BLAST results are available for this feature:
BLAST of NO01G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_021271082.13.900e-7451.82serine racemase isoform X1 [Numida meleagris][more]
NP_001120018.16.700e-7447.56serine racemase [Xenopus tropicalis] >XP_012811883... [more]
XP_013756166.16.700e-7452.34hypothetical protein AMSG_12086 [Thecamonas trahen... [more]
XP_012759227.11.100e-7348.63hypothetical protein SAMD00019534_003400, partial ... [more]
XP_005298329.12.000e-7348.09serine racemase isoform X1 [Chrysemys picta bellii... [more]
PTQ29617.14.300e-7348.85hypothetical protein MARPO_0138s0043 [Marchantia p... [more]
XP_007057757.19.700e-7348.36PREDICTED: serine racemase [Chelonia mydas] >EMP37... [more]
CDH52966.11.300e-7250.45serine racemase [Lichtheimia corymbifera JMRC:FSU:... [more]
XP_024050127.11.700e-7247.51serine racemase [Terrapene mexicana triunguis] >XP... [more]
OAD03159.12.200e-7252.32hypothetical protein MUCCIDRAFT_110015 [Mucor circ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008131NSK008131Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02110.1NO01G02110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550825gene_196Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g34gene1480Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02110.1NO01G02110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02110 ID=NO01G02110|Name=NO01G02110|organism=Nannochloropsis oceanica|type=gene|length=1350bp
GGCTGCTTTTCTCACCCTCACCCTCCCGTCCCCTCCACTTTGACACACAC
ACAGCGTGTCTGAGGACAAAAGCGCACTAGGCTCGGGCATCAGCCCATTT
ACACACACTCGGCAGGGATGGCAGCACCGCGCAAGACTGACCATTGCTCG
GGCTTGGACACAAAGCTCGACCTCCCCCTAATCCAAGACGCAGCCATGAC
CATACGACCCTTAGTGCACCGCACTCCCGTCCTACGGTGCCAAGCCATTG
AGACAGAAAGCCTTGCTGCTGCCCATTCCGTGTCAGTCACCCACCGGGAG
CTATTTTTCAAATGCGAGCTCTTCCAAAAAACGGGGTCATTCAAGGTCCG
CGGGGCCCTCAACGCGGTGGCCCACTTGCCTCCCACTGTCACAGACGTCG
TCACTCACAGCAGCGGAAACCATGCTCAAGCTCTTGCATGGGCAGCACGT
GCTAAAGGCCTTAATGCCCACATTGTTATGCCCCGGACAGCCCCCGCTGT
CAAGGTAAAAGCTGTGAAAGGGTACGGGGGCAAGGTCTATCTGTGCGAGC
CGACGGTAGAGGCCCGTTGGGCCATGGCAGCCGAGCTAGTGGGCTCAACA
GGCGGGGCATTGGTGCATCCTTCCGATGACTACAATGTGATGGCAGGCCA
AGGAACTGTAGCCCTGGAATTTTTAGAGCAGGTCAAGGAGGAGACGGGGG
GGGAGGAACTGGACGCGTTGATCATTCCGATTGGAGGGGGTGGGTTATTG
GGAGGCATGGCCGTGGCAGCTAAGACCATGCGGCCGGATATCAAGATAAT
AGGTGCAGAGCCCGCAGTAGTTGATGATGCGGCTAGGTCCAAGGCGACGG
GCGTGTTGTGTTTACACCCGACGCCGCCTCCACGGAGTATTGCTGATGGG
CTGTTGACGGTGTTGGGAAAGAAAACGTTTCCGATAGTGTCGTCCGATAA
GGTGGATGCGATTTTGACCGTATCGGAGAGGGAGATCGCCCGGGCGATGC
GTCTTGTGTATGAGAGGATGAAGCTGGTGATTGAGCCGAGTGCGGGGGTG
GGTGTGGCTGTGGCTTTGAGTTGCAAGAAATTAAATGCGGTGCTGGGGAT
GGAGTGTCGGAGAGTGGGCATTGTCTTATGTGGTGGCAATGTAGACATAA
GTGAAATGGAGGAGGTTTGGCGGTTGGCGGCTGAGGAGGAAGAAGAGGAA
GAGAGGGAGGAAGATGAGATTAACGGGCATAAGAGCAGTAGTAGTAGTAG
TTAGTAATGCGGGAGCAGGGGTAGAAGGCGTTAGATGTCAGAAAGATGTT
TAGTCTAGCAGACAAGAGGTAAATGGATAACTGCAACGAACGATTGGTTG
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protein sequence of NO01G02110.1

>NO01G02110.1-protein ID=NO01G02110.1-protein|Name=NO01G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=379bp
MAAPRKTDHCSGLDTKLDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLA
AAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSG
NHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEAR
WAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDA
LIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLH
PTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYER
MKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEMEEV
WRLAAEEEEEEEREEDEINGHKSSSSSS*
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Synonyms
Publications