NO01G02110, NO01G02110 (gene) Nannochloropsis oceanica

Overview
NameNO01G02110
Unique NameNO01G02110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1350
Alignment locationchr1:538436..539785 +

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Properties
Property NameValue
DescriptionSerine racemase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:538436..539785 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926TrpB-like_PLP-dep
Homology
BLAST of NO01G02110 vs. NCBI_GenBank
Match: EWM29194.1 (serine racemase [Nannochloropsis gaditana])

HSP 1 Score: 526.2 bits (1354), Expect = 8.600e-146
Identity = 270/344 (78.49%), Postives = 302/344 (87.79%), Query Frame = 0
Query:   11 SGLDTKLDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEMEEVWRLA 355
            +GLD  +DL L+Q+AA TI+  VHRTPVLRC AIE  +L    ++S    E FFKCELFQKTGSFKVRGALNAVAHLP TVTDVVTHSSGNHAQALAWAAR KGL AHIVMPRTAP VKV AVKGYGG+VYLCEPTVEARWAMA ELV STGGALVHPSDDY+VMAGQGTVALEFLEQV+EETGG  LDALIIP+GGGGLLGGMAVAAK ++P IKIIGAEP++VDDA RSKA G LCLHP+P PRSIADGLLTVLG++T+PIVSSDKVDAI+TVSE+EIA+AMRLVYERMKLVIEPSAGVGVAVA+   +L AVLG+ CRRVG++LCGGN+D+  +  +WRLA
Sbjct:   19 AGLD--IDLALVQEAAQTIKASVHRTPVLRCHAIENAALRNDSNLSF-RPEFFFKCELFQKTGSFKVRGALNAVAHLPSTVTDVVTHSSGNHAQALAWAARTKGLRAHIVMPRTAPKVKVDAVKGYGGQVYLCEPTVEARWAMAGELVASTGGALVHPSDDYSVMAGQGTVALEFLEQVEEETGGMSLDALIIPVGGGGLLGGMAVAAKALQPHIKIIGAEPSMVDDAFRSKAAGHLCLHPSPTPRSIADGLLTVLGQRTYPIVSSDKVDAIITVSEQEIAQAMRLVYERMKLVIEPSAGVGVAVAMRGDELEAVLGIGCRRVGVILCGGNLDMDRLGGIWRLA 359          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: CBN77057.1 (Serine/Threonine Dehydratase [Ectocarpus siliculosus])

HSP 1 Score: 320.1 bits (819), Expect = 9.300e-84
Identity = 182/333 (54.65%), Postives = 226/333 (67.87%), Query Frame = 0
Query:   22 IQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELV-GSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTP-PPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGM--ECRRVGIVLCGGNVDISEMEEV 351
            I+ AA  I P VH TPV+ C+A++  S           RE+F KCELFQKTGSFK RGA NAV   PP   D+VTHSSGNHAQALAWAA  KG+NAHIVMP  + AVKV AV+ YG  + LCE T   R   AA +V G     L+HP +D  V  GQGTV LE ++QVKE+TGG  LDA+++P+GGGGL+ G+A A K + P I++IGAEP+   DA RSK +G L  H     P +IADGL T LG  T+P+V  D VD I+TVSE EI   MR+VYERMKLVIEPSA VGVA  +S +    V GM  + +RVG+VLCGGNVD++ ++++
Sbjct:   20 IRQAAARIGPHVHYTPVMTCRALDEMS---------GGREVFLKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVV-RDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPR----VRGMPQDVKRVGVVLCGGNVDVTLLQDL 338          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: OUT51371.1 (serine dehydratase [Phycisphaera sp. TMED9])

HSP 1 Score: 306.6 bits (784), Expect = 1.100e-79
Identity = 172/332 (51.81%), Postives = 220/332 (66.27%), Query Frame = 0
Query:   18 DLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTD--VVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            +L  I+ AA  I P VHRTPVL CQAI+           V   E+F KCE  QK G+FK RGA NAV  L     +  VVTHSSGNHAQALAWAA  +G+ AHIVMP  APAVK KAV GYGG V+ CEPT+E+R     ++   TGG ++ P DD  V+AGQGT+ LE L QV       +LDA+++P+GGGG++ G+A+ AK + P ++I+GAEP +VDDAARS+ +G +  H   P R+IADGL T LGK+TFP++  + VD I+TV E EI + +RLV ER KLVIEPSA VG+A   S     A      RR+G+VLCGGN+D+  +
Sbjct:   10 NLDAIRTAARRIEPHVHRTPVLTCQAID----------EVAGCEVFLKCENLQKVGAFKARGASNAVFSLTDAEAEPGVVTHSSGNHAQALAWAAGRRGIPAHIVMPTNAPAVKKKAVLGYGGIVHDCEPTLESRLETCRKVAEDTGGTVIPPYDDDRVIAGQGTIGLELLGQV------PDLDAIVVPVGGGGMIAGIAICAKALSPRLEILGAEPELVDDAARSRLSGRIEPHAGDPTRTIADGLRTTLGKRTFPVI-RELVDDIITVPETEIRQGLRLVMERAKLVIEPSAAVGIAATRS----PAFRARGHRRIGVVLCGGNLDLDAL 320          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: CBJ28579.1 (Serine Racemase [Ectocarpus siliculosus])

HSP 1 Score: 303.5 bits (776), Expect = 9.000e-79
Identity = 174/341 (51.03%), Postives = 225/341 (65.98%), Query Frame = 0
Query:   17 LDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGS-TGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLC--LHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEMEEVWRLA 355
            L L  I++AA  I P    TPVL C A+            ++ RE+FFKCELFQKTGSFK RGA NAV   PP    VVTHSSGNHAQALAWAA  +G+ AHIVMPR+  AVKV AV+GYG  V LCE +  +R + AA++V    G +L+H S+D  V  G GT+ LE + QVK+ TGG +LDA+I+ IGGGGL+ G+  A K + P+ +IIGA+P    DA +SK +G LC        P +IADGL T LG K +P+V  D VD I+TVSE +I   M +VY+RMKLVIEPSA VGVA  +S +     +  E R+VG+VLCGGNVD++ ++++  +A
Sbjct:   37 LSLAGIREAADRISPHTQITPVLTCGALN----------EMSGREVFFKCELFQKTGSFKARGACNAVLLTPPECPGVVTHSSGNHAQALAWAASVRGIPAHIVMPRSCMAVKVDAVRGYGASVTLCENSKSSRESTAADIVSKLPGSSLIHSSNDARVQCGIGTIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVV-RDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQV--RAMPSEMRKVGVVLCGGNVDVTLLQDLLSVA 364          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: WP_053230942.1 (serine/threonine dehydratase [Sandaracinus amylolyticus] >AKF03487.1 Threonine dehydratase, catabolic [Sandaracinus amylolyticus])

HSP 1 Score: 303.5 bits (776), Expect = 9.000e-79
Identity = 176/340 (51.76%), Postives = 227/340 (66.76%), Query Frame = 0
Query:   18 DLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVT--DVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGME-CRRVGIVLCGGNVDISEMEEVWRLA 355
            DL  +++AA  IRP   RTPV+    ++  S           RELFFKCE FQ+ G+FK RGA NAV  L        V THSSGNHAQALA AA+ +G+ AH+VMP +APA+K +AV GYG  V  C PT+ AR   AA +V  TG  L+ P D  +V+AGQGT+ALE L+++       +LDA+++PIGGGG++ G+A+AA+ + P +K+I AEPA  DDAARSKA G L   P   P++IADGLLT LG  T+P+V  D VD ++TV E  I RAMRLV+ERMKLVIEPSA VGVAVALS    +A+  +E  +RVG+VLCGGNV +  +  + R A
Sbjct:    8 DLAAVREAAERIRPWAIRTPVMTSSTMDARS----------GRELFFKCETFQRVGAFKFRGACNAVMKLDDATAARGVATHSSGNHAQALALAAKLRGIPAHVVMPTSAPAIKKEAVLGYGANVIPCAPTLAAREETAARVVAETGATLIPPYDHPDVIAGQGTIALELLDEI------ADLDAIVVPIGGGGMISGIALAARELAPRVKVIAAEPAGADDAARSKAGGALV--PQTGPKTIADGLLTSLGSLTWPVV-RDVVDRVITVDEDAIVRAMRLVFERMKLVIEPSAAVGVAVALS----DAMREVEGAQRVGVVLCGGNVALDRLPWITRPA 324          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: OZJ03012.1 (hypothetical protein BZG36_03976 [Bifiguratus adelaidae])

HSP 1 Score: 300.1 bits (767), Expect = 1.000e-77
Identity = 176/338 (52.07%), Postives = 220/338 (65.09%), Query Frame = 0
Query:   17 LDLPLIQD---AAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVL----GMECRRVGIVLCGGNVDISEM 348
            L LP +QD   AA  IRP VH+TPV+ C+ +   S             LFFKCE  QK G+FK+RGA NA+  LP     VVTHSSGNHAQALA AAR  G+ A+IVMP T+P VK  AVKGYGG+V  C  T++AR   A  +   TG   +HP D  +++AGQGT+ LE L Q  ++  G +LDA+I+P+GGGG+L G A+AAK + P I++  AEP  VDD A+S A   L   P   P S+ADGLLT LG  TFP++  DKVDA+ TV+E EI +  R+V+ERMKLVIEPSA VGVAVAL  K+  A      G   R VG+VLCGGNVD+ +M
Sbjct:    3 LTLPTLQDVQEAAQRIRPHVHKTPVMTCETMNDWS----------GLRLFFKCENLQKGGAFKIRGATNALLRLPEP-RPVVTHSSGNHAQALALAARQLGVEAYIVMPETSPQVKKDAVKGYGGRVTECINTLQAREDTAHRIQQETGATFIHPYDHPHIIAGQGTLMLELLSQTHDDY-GTQLDAIIVPVGGGGMLSGCAIAAKGLDPTIRVFAAEPLAVDDCAQSFAKKELV--PQTRPHSVADGLLTSLGSYTFPVI-MDKVDAVFTVTEEEIIKTTRMVWERMKLVIEPSAAVGVAVALFRKEQLASFTKANGEPIRHVGVVLCGGNVDVKKM 325          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: WP_082839189.1 (serine dehydratase [Gemmata sp. SH-PL17] >AMV24447.1 L-threonine dehydratase catabolic TdcB [Gemmata sp. SH-PL17])

HSP 1 Score: 296.6 bits (758), Expect = 1.100e-76
Identity = 173/332 (52.11%), Postives = 219/332 (65.96%), Query Frame = 0
Query:   18 DLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHL--PPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            DLP + +AA  IR +VHRTPV+ C+ ++           +  R+LFFKCE  QK G+FK RGA NAV  L        VVTHSSGNHAQALA AAR +G+ A+IVMP+TAPAVK   V+GYGG++  CEP +  R   A ELV  TG  L+ P D  +V++GQGT ALE LE V       +LDA++ P+GGGGLL G AVAA+  +P I++ GAEP   DDAARSKA G   L     P +IADGLLT  G+ T+PI+  D+VD I TV++ EI  AMRLV+ERMKL++EPS  VG AVALS   L  + G E  +VGIV  GGNV++ ++
Sbjct:    7 DLPAVLEAAERIRGIVHRTPVMTCETLD----------RLAGRKLFFKCENLQKIGAFKYRGATNAVRKLTDAEAAKGVVTHSSGNHAQALALAARERGIPAYIVMPKTAPAVKKAGVEGYGGQITECEPNLADRERAANELVAKTGATLIPPFDHVDVISGQGTTALELLEDV------PDLDAIVTPVGGGGLLAGCAVAARGRKPGIRVFGAEPLGADDAARSKAAGEQLLQTA--PNTIADGLLTSTGQLTWPII-RDQVDRIFTVTDDEIRAAMRLVWERMKLIVEPSGAVGAAVALS-DALKVLAGAE--KVGIVFSGGNVNLDKL 316          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: WP_088251756.1 (serine dehydratase [Fimbriiglobus ruber] >OWK46542.1 Threonine dehydratase, catabolic [Fimbriiglobus ruber])

HSP 1 Score: 295.4 bits (755), Expect = 2.500e-76
Identity = 174/333 (52.25%), Postives = 218/333 (65.47%), Query Frame = 0
Query:   17 LDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVT--DVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEM 348
            + L  ++ AA  I  +VHRTPV+  + I+           +T R + FKCE  QKTG+FK RGA NAV  L        VVTHSSGNHAQALA AAR +G+ A IVMPRTA  VK +AV GYGG++  CEPT+ AR   AA +   TGG L+ P D  +VMAGQGT ALE LE         +LD LI+P+GGGGLL G  +A + ++P I++IGAEP   DDAARSKA G     P   P SIADGLLT LG+ T+PI+  D+VD ++TV E +I RAMRLV+ERMKLVIEPSA VGVAV LS +  +     +  +VG+VLCGGNV + ++
Sbjct:   12 ISLADVRAAAERIAGIVHRTPVMSSETID----------GLTGRSVVFKCENLQKTGAFKYRGATNAVRKLDAATAARGVVTHSSGNHAQALALAARVRGIPAEIVMPRTAATVKKQAVIGYGGRLTECEPTLAAREQTAAAIAERTGGTLIPPFDHADVMAGQGTTALELLEDF------PDLDTLIVPVGGGGLLAGCCIAVRGVKPGIRVIGAEPLGADDAARSKANGSWV--PQTAPNSIADGLLTSLGQLTWPII-RDQVDRVMTVDEEQIRRAMRLVWERMKLVIEPSAAVGVAVVLSDEFRSL---KDVNKVGVVLCGGNVTLDKL 322          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: XP_018412656.1 (PREDICTED: serine racemase [Nanorana parkeri])

HSP 1 Score: 290.4 bits (742), Expect = 7.900e-75
Identity = 162/330 (49.09%), Postives = 223/330 (67.58%), Query Frame = 0
Query:   22 IQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLP-PTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEMEEV 351
            +Q+A   IR L+H TPV+ C ++  ++LAA        R+LFFKCEL QKTGSFK+RGALNAV  LP  T   VVTHSSGNH QALA AA+  G+ AH+V+PRTA + K  A+ GYG  +  C+PT E+R  +AA+ V +TGG LVHP+ D  V+AGQGT+  E L+QV        ++AL+IP+GGGG+L G+AVA K ++PD++I  AEP   DD  RSK  GVL  +   PP +IAD + T +G  T+P++  D VD +  V+E EI +A +LV+ERMKL+IEP+AG+G+A  LS +        + + + ++LCGGN+DIS ++ V
Sbjct:   13 VQEAHKRIRDLIHVTPVMTCSSL--DALAA--------RKLFFKCELLQKTGSFKIRGALNAVQSLPADTCKAVVTHSSGNHGQALALAAKMIGIPAHVVVPRTAASCKKAAISGYGAVIVECDPTDESRTMVAAKTVETTGGILVHPNQDPAVIAGQGTIGFEVLQQV------PSVEALVIPVGGGGMLAGIAVAVKAIKPDVRIYAAEPLNADDCYRSKVNGVLTPN-AKPPTTIADAVKTSIGPNTWPVI-RDLVDDVFVVTEEEIKQATQLVWERMKLLIEPTAGLGLAAVLSRRFQETT--RDIQNICVILCGGNLDISSIDWV 322          
BLAST of NO01G02110 vs. NCBI_GenBank
Match: ORX56414.1 (tryptophan synthase beta subunit-like PLP-dependent enzyme [Hesseltinella vesiculosa])

HSP 1 Score: 290.0 bits (741), Expect = 1.000e-74
Identity = 172/328 (52.44%), Postives = 221/328 (67.38%), Query Frame = 0
Query:   17 LDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLAAAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSGNHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEARWAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDALIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLHPTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYERMKLVIEPSAGVGVAVALSCKKLNAVL-GMECRRVGIVLCGGNVD 344
            +D+  IQ A+  I   VHRTPV+ C  +        + +     ELFFKCELFQKTGSFK RGA NAV  L    + VVTHSSGNHAQALA AA+A+G+ A+IVMP+ AP VK  AV+GYGG V  CEPTVEAR   AA+L   TG  ++HP D+ +VMAGQGT+ALEFL Q+ E+  G  LDAL++PIGGGG++ G + AAK++   IK+ GAEPA V+DA RS  +G   L       S+ADGLLT +G+ TFPI+  + VD + TV+E+EI RA+ L++ R KL IEPS+ V VAVAL     + +      +++GIVL GGNVD
Sbjct:    7 IDIEDIQAASCNIN--VHRTPVMSCSTL--------NDLVPLDIELFFKCELFQKTGSFKFRGASNAVNLLTSCESGVVTHSSGNHAQALAKAAQARGIPAYIVMPKNAPQVKKDAVRGYGGTVVECEPTVEAREQTAAKLAEETGATMIHPFDNPHVMAGQGTMALEFLTQMNEQ--GTVLDALLVPIGGGGMMAGCSTAAKSIHGSIKVFGAEPAQVNDAHRSYYSGDR-LSNAKDAVSVADGLLTNVGELTFPIIQKN-VDGVFTVTEQEIVRALHLMWVRAKLPIEPSSAVPVAVALYNSDFHKIAKDQGLKKIGIVLSGGNVD 320          
The following BLAST results are available for this feature:
BLAST of NO01G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29194.18.600e-14678.49serine racemase [Nannochloropsis gaditana][more]
CBN77057.19.300e-8454.65Serine/Threonine Dehydratase [Ectocarpus siliculos... [more]
OUT51371.11.100e-7951.81serine dehydratase [Phycisphaera sp. TMED9][more]
CBJ28579.19.000e-7951.03Serine Racemase [Ectocarpus siliculosus][more]
WP_053230942.19.000e-7951.76serine/threonine dehydratase [Sandaracinus amyloly... [more]
OZJ03012.11.000e-7752.07hypothetical protein BZG36_03976 [Bifiguratus adel... [more]
WP_082839189.11.100e-7652.11serine dehydratase [Gemmata sp. SH-PL17] >AMV24447... [more]
WP_088251756.12.500e-7652.25serine dehydratase [Fimbriiglobus ruber] >OWK46542... [more]
XP_018412656.17.900e-7549.09PREDICTED: serine racemase [Nanorana parkeri][more]
ORX56414.11.000e-7452.44tryptophan synthase beta subunit-like PLP-dependen... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008131NSK008131Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02110.1NO01G02110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550825gene_196Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g34gene1480Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02110.1NO01G02110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02110 ID=NO01G02110|Name=NO01G02110|organism=Nannochloropsis oceanica|type=gene|length=1350bp
GGCTGCTTTTCTCACCCTCACCCTCCCGTCCCCTCCACTTTGACACACAC
ACAGCGTGTCTGAGGACAAAAGCGCACTAGGCTCGGGCATCAGCCCATTT
ACACACACTCGGCAGGGATGGCAGCACCGCGCAAGACTGACCATTGCTCG
GGCTTGGACACAAAGCTCGACCTCCCCCTAATCCAAGACGCAGCCATGAC
CATACGACCCTTAGTGCACCGCACTCCCGTCCTACGGTGCCAAGCCATTG
AGACAGAAAGCCTTGCTGCTGCCCATTCCGTGTCAGTCACCCACCGGGAG
CTATTTTTCAAATGCGAGCTCTTCCAAAAAACGGGGTCATTCAAGGTCCG
CGGGGCCCTCAACGCGGTGGCCCACTTGCCTCCCACTGTCACAGACGTCG
TCACTCACAGCAGCGGAAACCATGCTCAAGCTCTTGCATGGGCAGCACGT
GCTAAAGGCCTTAATGCCCACATTGTTATGCCCCGGACAGCCCCCGCTGT
CAAGGTAAAAGCTGTGAAAGGGTACGGGGGCAAGGTCTATCTGTGCGAGC
CGACGGTAGAGGCCCGTTGGGCCATGGCAGCCGAGCTAGTGGGCTCAACA
GGCGGGGCATTGGTGCATCCTTCCGATGACTACAATGTGATGGCAGGCCA
AGGAACTGTAGCCCTGGAATTTTTAGAGCAGGTCAAGGAGGAGACGGGGG
GGGAGGAACTGGACGCGTTGATCATTCCGATTGGAGGGGGTGGGTTATTG
GGAGGCATGGCCGTGGCAGCTAAGACCATGCGGCCGGATATCAAGATAAT
AGGTGCAGAGCCCGCAGTAGTTGATGATGCGGCTAGGTCCAAGGCGACGG
GCGTGTTGTGTTTACACCCGACGCCGCCTCCACGGAGTATTGCTGATGGG
CTGTTGACGGTGTTGGGAAAGAAAACGTTTCCGATAGTGTCGTCCGATAA
GGTGGATGCGATTTTGACCGTATCGGAGAGGGAGATCGCCCGGGCGATGC
GTCTTGTGTATGAGAGGATGAAGCTGGTGATTGAGCCGAGTGCGGGGGTG
GGTGTGGCTGTGGCTTTGAGTTGCAAGAAATTAAATGCGGTGCTGGGGAT
GGAGTGTCGGAGAGTGGGCATTGTCTTATGTGGTGGCAATGTAGACATAA
GTGAAATGGAGGAGGTTTGGCGGTTGGCGGCTGAGGAGGAAGAAGAGGAA
GAGAGGGAGGAAGATGAGATTAACGGGCATAAGAGCAGTAGTAGTAGTAG
TTAGTAATGCGGGAGCAGGGGTAGAAGGCGTTAGATGTCAGAAAGATGTT
TAGTCTAGCAGACAAGAGGTAAATGGATAACTGCAACGAACGATTGGTTG
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protein sequence of NO01G02110.1

>NO01G02110.1-protein ID=NO01G02110.1-protein|Name=NO01G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=379bp
MAAPRKTDHCSGLDTKLDLPLIQDAAMTIRPLVHRTPVLRCQAIETESLA
AAHSVSVTHRELFFKCELFQKTGSFKVRGALNAVAHLPPTVTDVVTHSSG
NHAQALAWAARAKGLNAHIVMPRTAPAVKVKAVKGYGGKVYLCEPTVEAR
WAMAAELVGSTGGALVHPSDDYNVMAGQGTVALEFLEQVKEETGGEELDA
LIIPIGGGGLLGGMAVAAKTMRPDIKIIGAEPAVVDDAARSKATGVLCLH
PTPPPRSIADGLLTVLGKKTFPIVSSDKVDAILTVSEREIARAMRLVYER
MKLVIEPSAGVGVAVALSCKKLNAVLGMECRRVGIVLCGGNVDISEMEEV
WRLAAEEEEEEEREEDEINGHKSSSSSS*
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Synonyms
Publications