NO01G02030, NO01G02030 (gene) Nannochloropsis oceanica

Overview
NameNO01G02030
Unique NameNO01G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr1:515182..517044 +

Link to JBrowse

Properties
Property NameValue
DescriptionNuclear lim factor interactor-interacting protein cleavage-specific form
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:515182..517044 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR004274NIF
Vocabulary: Molecular Function
TermDefinition
GO:0016791phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0016311dephosphorylation
Homology
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: GAX96734.1 (lectin putative [Pythium insidiosum])

HSP 1 Score: 243.0 bits (619), Expect = 1.700e-60
Identity = 125/278 (44.96%), Postives = 184/278 (66.19%), Query Frame = 0 
Query:  142 SIPRALANLMHQTDKDGKSQHVALSPSPLHKEQHEQDE-QAPVAG--LSLLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDV 417
            ++P  LA+++HQTD++GK   +  +       + ++DE   P  G   +L + +  ++ +S+ ++        +         K S K   S +  +  ++++   ++    P D GKKCLVLDLDETL HSSF+P +  D++IP+ I+GT HQVYV KRPGVDEF+  +AK YEIV++TASL+ YADPLLD+LD HNVIRHRL+RE C  ++G+YVKDL+ L R++ Q I++DNSP+SY+F P NAIGCSS+ID   D+ELD I+ FL ++R  +DV
Sbjct:   62 NVPNPLASIVHQTDRNGKQNAIVTTGRAGTARRLQRDEHDGPNGGSFRNLFANIWSALGISEQQSQQGQVGANALVQQKATPSKGSQKSSQSSSRQVVELRKS---VIPPQGPQDAGKKCLVLDLDETLVHSSFRPTQNPDYIIPVDIDGTVHQVYVCKRPGVDEFLVDMAKHYEIVVYTASLSKYADPLLDRLDPHNVIRHRLFREHCVQYEGNYVKDLSLLDREIAQTIIIDNSPMSYLFHPRNAIGCSSFIDDMNDRELDSISRFLTNIRAVDDV 336
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: AAV63937.1 (putative nuclear LIM factor interactor-interacting protein spore-specific form [Phytophthora infestans])

HSP 1 Score: 240.7 bits (613), Expect = 8.500e-60
Identity = 128/283 (45.23%), Postives = 177/283 (62.54%), Query Frame = 0 
Query:  142 SIPRALANLMHQTDKDGKSQHVALSPSPLHKE-QHEQDEQAPVAGLSLLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            ++   LA+++HQTD++GK Q +      + +E    +  Q   +  ++   +  ++ L + +               D  K +  +  +S   S G        LL  ++P+DV KKCLVLDLDETL HSSF+P ++ DF+IP+ I+GT H VYV KRPG +EF+  +AK YEIVI+TASL+ YADPLLD+LD    IR+RLYRE C  ++GSYVKDL+ L RD+ Q I+VDNSP++Y F P NAIGCSS+ID   D+ELD IA FL   +D EDVR H + W
Sbjct:   25 NVASPLASVVHQTDRNGKQQLILTGVRHMSREGSCAKKTQQRGSIRNIFGSIWSALSLHEQQ--------------EDDEKVKQGRSSTSKRQSAGRAIELRPSLLPPVYPNDVDKKCLVLDLDETLVHSSFRPTDSYDFIIPVNIDGTVHHVYVCKRPGAEEFLIEMAKYYEIVIYTASLSKYADPLLDKLDPEGTIRYRLYREHCVQYEGSYVKDLSLLDRDITQMIIVDNSPMAYAFHPRNAIGCSSFIDDPNDRELDSIARFLTKFQDVEDVRNHMQLW 293
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: OEU15294.1 (NIF-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 239.6 bits (610), Expect = 1.900e-59
Identity = 114/182 (62.64%), Postives = 136/182 (74.73%), Query Frame = 0 
Query:  245 LLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427
            LLG +H  D GKKCLVLDLDETL HSSF+ V  ADFVIP+ IE   H VYV KRPGVDEF+  +AK YEIVI+TASL  YADPLLD LD    IR+RL+RESC F++G+YVKDL+ L RD+   I++DNSP SY+F PENAI CSS+ID   D+ELD I +FL  ++D +DVR  C  WR W
Sbjct:   47 LLGPIHRLDTGKKCLVLDLDETLVHSSFRAVAGADFVIPVQIEDVVHFVYVAKRPGVDEFLIEMAKHYEIVIYTASLNKYADPLLDLLDPQKTIRYRLFRESCAFYEGNYVKDLSVLDRDLSSTIIIDNSPNSYLFHPENAIDCSSFIDDPRDRELDQIGSFLTGIKDAKDVRGICHQWRDW 228
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: AAV63939.1 (putative nuclear LIM factor interactor-interacting protein cleavage-specific form [Phytophthora infestans])

HSP 1 Score: 236.9 bits (603), Expect = 1.200e-58
Identity = 129/279 (46.24%), Postives = 177/279 (63.44%), Query Frame = 0 
Query:  147 LANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD--NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LA+++HQ D++G+ Q V L+ S     +         +  +LL+  + ++ +S+  ++T  S PT                K L+S   +LG        +L  + PDD  KKCLVLDLDETL HSSF+P    D +IP+ I+GT HQVYV +RPG +E +  +AK YEIV++TASL+ YADPLLD+LD   VIRHRLYRE C  ++GSYVKDL+ L RD+ Q I++DN+P+SY+F P NAIGCSS+ID   D+EL+ I+ FL  +RD EDVR H   W
Sbjct:   62 LASIVHQADRNGRQQPV-LTGSRRISCEGAAANGGQGSFRNLLTNFMSALGVSEQQHQTVRSSPTK---------------KKLAS---ALGTTIELRKSVLPPVSPDDAAKKCLVLDLDETLVHSSFRPTSNPDLIIPVNIDGTIHQVYVCRRPGCEEILIEMAKFYEIVVYTASLSKYADPLLDKLDPEGVIRHRLYREHCVQYEGSYVKDLSLLDRDISQTIIIDNAPMSYIFHPRNAIGCSSFIDDPSDRELESISRFLTKIRDVEDVRNHLHMW 321
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: ETI50503.1 (hypothetical protein F443_05975 [Phytophthora parasitica P1569] >ETM50090.1 hypothetical protein L914_05798 [Phytophthora parasitica])

HSP 1 Score: 236.9 bits (603), Expect = 1.200e-58
Identity = 131/278 (47.12%), Postives = 176/278 (63.31%), Query Frame = 0 
Query:  147 LANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD-NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LA+++HQTDK GK Q V L+ S               +  +LL+  + ++ +++ ++T  S PT            KQ +   +  T  L   ++N   +L    P DV KKCLVLDLDETL HSSF+P    D +IP+ I+GT H VYV KRPG +EF+  +AK YEIV++TASL++YADPLLD+LD   VIR+RLYRE C  ++G YVKDL+ L RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+EL  I+ FL  +RD EDVR H   W
Sbjct:   66 LASIVHQTDKSGKQQPV-LTGSRRFIRDGAATNGGQGSFRNLLTNFMSALGVNEQHQTVRSSPT------------KQKLAGAADNTIEL---RKN---ILPPASPADVNKKCLVLDLDETLVHSSFRPTTNPDLIIPVNIDGTTHLVYVCKRPGCEEFLIEMAKYYEIVVYTASLSVYADPLLDKLDPEGVIRYRLYREHCVQYEGCYVKDLSLLDRDIAQTIIIDNSPMSYIFHPRNAIGCSSFIDDPNDRELVSISRFLTKIRDVEDVRNHLHIW 324
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_002901996.1 (NLI interacting factor-like phosphatase, putative [Phytophthora infestans T30-4] >EEY57386.1 NLI interacting factor-like phosphatase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 236.9 bits (603), Expect = 1.200e-58
Identity = 129/279 (46.24%), Postives = 177/279 (63.44%), Query Frame = 0 
Query:  147 LANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD--NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LA+++HQ D++G+ Q V L+ S     +         +  +LL+  + ++ +S+  ++T  S PT                K L+S   +LG        +L  + PDD  KKCLVLDLDETL HSSF+P    D +IP+ I+GT HQVYV +RPG +E +  +AK YEIV++TASL+ YADPLLD+LD   VIRHRLYRE C  ++GSYVKDL+ L RD+ Q I++DN+P+SY+F P NAIGCSS+ID   D+EL+ I+ FL  +RD EDVR H   W
Sbjct:   62 LASIVHQADRNGRQQPV-LTGSRRISCEGAAANGGQGSFRNLLTNFMSALGVSEQQHQTVRSSPTK---------------KKLAS---ALGTTIELRKSVLPPVSPDDAAKKCLVLDLDETLVHSSFRPTSNPDLIIPVNIDGTIHQVYVCRRPGCEEILIEMAKFYEIVVYTASLSKYADPLLDKLDPEGVIRHRLYREHCVQYEGSYVKDLSLLDRDISQTIIIDNAPMSYIFHPRNAIGCSSFIDDPSDRELESISRFLTKIRDVEDVRNHLHMW 321
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_002902000.1 (nuclear LIM factor interactor-interacting protein spore-specific form, putative [Phytophthora infestans T30-4] >EEY57390.1 nuclear LIM factor interactor-interacting protein spore-specific form, putative [Phytophthora infestans T30-4])

HSP 1 Score: 236.1 bits (601), Expect = 2.100e-58
Identity = 111/179 (62.01%), Postives = 138/179 (77.09%), Query Frame = 0 
Query:  245 LLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LL  ++P+DV KKCLVLDLDETL HSSF+P ++ DF+IP+ I+GT H VYV KRPG +EF+  +AK YEIVI+TASL+ YADPLLD+LD    IR+RLYRE C  ++GSYVKDL+ L RD+ Q I+VDNSP++Y F P NAIGCSS+ID   D+ELD IA FL   +D EDVR H + W
Sbjct:   79 LLPPVYPNDVDKKCLVLDLDETLVHSSFRPTDSYDFIIPVNIDGTVHHVYVCKRPGAEEFLIEMAKYYEIVIYTASLSKYADPLLDKLDPEGTIRYRLYREHCVQYEGSYVKDLSLLDRDITQMIIVDNSPMAYAFHPRNAIGCSSFIDDPNDRELDSIARFLTKFQDVEDVRNHMQLW 257
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: ETK90384.1 (hypothetical protein L915_05848 [Phytophthora parasitica] >ETL43796.1 hypothetical protein L916_05784 [Phytophthora parasitica] >ETL96943.1 hypothetical protein L917_05673 [Phytophthora parasitica] >ETP20254.1 hypothetical protein F441_05983 [Phytophthora parasitica CJ01A1] >ETP48197.1 hypothetical protein F442_06007 [Phytophthora parasitica P10297])

HSP 1 Score: 235.7 bits (600), Expect = 2.700e-58
Identity = 131/278 (47.12%), Postives = 175/278 (62.95%), Query Frame = 0 
Query:  147 LANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD-NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LA+++HQTDK GK Q V L+ S               +  +LL+  + ++ +++ ++T  S PT            KQ +   +  T  L   ++N   +L    P DV KKCLVLDLDETL HSSF+P    D +IP+ I+GT H VYV KRPG +EF+  +AK YEIV++TASL+ YADPLLD+LD   VIR+RLYRE C  ++G YVKDL+ L RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+EL  I+ FL  +RD EDVR H   W
Sbjct:   66 LASIVHQTDKSGKQQPV-LTGSRRFIRDGAATNGGQGSFRNLLTNFMSALGVNEQHQTVRSSPT------------KQKLAGAADNTIEL---RKN---ILPPASPADVNKKCLVLDLDETLVHSSFRPTTNPDLIIPVNIDGTTHLVYVCKRPGCEEFLIEMAKYYEIVVYTASLSKYADPLLDKLDPEGVIRYRLYREHCVQYEGCYVKDLSLLDRDIAQTIIIDNSPMSYIFHPRNAIGCSSFIDDPNDRELVSISRFLTKIRDVEDVRNHLHIW 324
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: KUF68283.1 (CTD small phosphatase protein [Phytophthora nicotianae] >KUF86546.1 CTD small phosphatase protein [Phytophthora nicotianae])

HSP 1 Score: 235.7 bits (600), Expect = 2.700e-58
Identity = 131/278 (47.12%), Postives = 175/278 (62.95%), Query Frame = 0 
Query:  147 LANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD-NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LA+++HQTDK GK Q V L+ S               +  +LL+  + ++ +++ ++T  S PT            KQ +   +  T  L   ++N   +L    P DV KKCLVLDLDETL HSSF+P    D +IP+ I+GT H VYV KRPG +EF+  +AK YEIV++TASL+ YADPLLD+LD   VIR+RLYRE C  ++G YVKDL+ L RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+EL  I+ FL  +RD EDVR H   W
Sbjct:   65 LASIVHQTDKSGKQQPV-LTGSRRFIRDGAATNGGQGSFRNLLTNFMSALGVNEQHQTVRSSPT------------KQKLAGAADNTIEL---RKN---ILPPASPADVNKKCLVLDLDETLVHSSFRPTTNPDLIIPVNIDGTTHLVYVCKRPGCEEFLIEMAKYYEIVVYTASLSKYADPLLDKLDPEGVIRYRLYREHCVQYEGCYVKDLSLLDRDIAQTIIIDNSPMSYIFHPRNAIGCSSFIDDPNDRELVSISRFLTKIRDVEDVRNHLHIW 323
[Close]
BLAST of NO01G02030 vs. NCBI_GenBank
Match: ETO79247.1 (hypothetical protein F444_06022 [Phytophthora parasitica P1976])

HSP 1 Score: 234.6 bits (597), Expect = 6.100e-58
Identity = 131/278 (47.12%), Postives = 175/278 (62.95%), Query Frame = 0 
Query:  147 LANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD-NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            LA+++HQTDK GK Q V L+ S               +  +LL+  + ++ +++ ++T  S PT            KQ +   +  T  L   ++N   +L    P DV KKCLVLDLDETL HSSF+P    D +IP+ I+GT H VYV KRPG +EF+  +AK YEIV++TASL+ YADPLLD+LD   VIR+RLYRE C  ++G YVKDL+ L RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+EL  I+ FL  +RD EDVR H   W
Sbjct:   66 LASIVHQTDKSGKQQPV-LTGSRRFIRDGAATNGGQGSFRNLLTNFMSALGVNEQHQTVRSSPT------------KQKLAGAADNTIEL---RKN---ILPPASPADVNKKCLVLDLDETLVHSSFRPTTNPDLIIPVNIDGTTHLVYVCKRPGCEEFLIEMAKYYEIVVYTASLSKYADPLLDKLDPEGVIRYRLYREHCVQYEGCYVKDLSLLDRDIAQTIIIDNSPMSYIFHPLNAIGCSSFIDDPNDRELVSISRFLTKIRDVEDVRNHLHIW 324
The following BLAST results are available for this feature:
BLAST of NO01G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX96734.11.700e-6044.96lectin putative [Pythium insidiosum][more]
AAV63937.18.500e-6045.23putative nuclear LIM factor interactor-interacting... [more]
OEU15294.11.900e-5962.64NIF-domain-containing protein [Fragilariopsis cyli... [more]
AAV63939.11.200e-5846.24putative nuclear LIM factor interactor-interacting... [more]
ETI50503.11.200e-5847.12hypothetical protein F443_05975 [Phytophthora para... [more]
XP_002901996.11.200e-5846.24NLI interacting factor-like phosphatase, putative ... [more]
XP_002902000.12.100e-5862.01nuclear LIM factor interactor-interacting protein ... [more]
ETK90384.12.700e-5847.12hypothetical protein L915_05848 [Phytophthora para... [more]
KUF68283.12.700e-5847.12CTD small phosphatase protein [Phytophthora nicoti... [more]
ETO79247.16.100e-5847.12hypothetical protein F444_06022 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02030.1NO01G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576477gene_184Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g26gene1489Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02030.1NO01G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02030 ID=NO01G02030|Name=NO01G02030|organism=Nannochloropsis oceanica|type=gene|length=1863bp
CAGGCTACATTTAAGACAGCCATGTCAGATGTCAGGCGGCTCAGTGCCAA
GGgtaagtgtctgctgcgcccctcatctatctccctttgtccctcatgca
ggcaaggatccacctctctcactcccctgcctcttccacactcctctttg
cttgacccccactcccttcactcacactcccatggtttataccctatgct
ttttaattttctttgctccacttactcagaatcatacacacaaacacaca
gGCGCGGCTGGAGGACTGACCATAGATACTGATGCCATGCCACCCGTCAT
TGTCCCACCTATCAACGTCGCTGCTGCTTCCCCTACCGGACCAAATGGAA
CGCCGAGAAACTGGTTTGGAAAGACGTCGTCAGGTCTCGCAGATCCCCGC
TCCTGGCTGCAGTCACCTCGCAAATGGGCAAACAATCGAACCCCTACGAA
TCAAGGTGGTAACGCCACGCCCAACACAAAAAAAATGGTTGCATATTTCA
ATTCGTTGCCCCATTCGGAAAAATTGATGAGCAGACAGGAAGAGGAGGAT
GGATTTAAGATTGGCAACAGCAGCGGTAGCAGCAGCAGCAGCAGCAGCAG
CAGTAGCAGCAGCAGTACCACCACCGCCACCATAACCGCTGCTTCTATCC
CCAGGGCGCTGGCCAATCTCATGCACCAAACGGACAAGGACGGTAAATCC
CAGCACGTAGCTCTCTCACCATCTCCTCTCCATAAGGAACAACACGAGCA
AGACGAGCAGGCACCTGTCGCGGGGCTTTCCCTCTTAAGTCGCCTATTGC
GTTCAATACACCTCTCGGACAACGAGACCGCTACTTCGATTCCTACCGGT
ACTTCCCCCCCTTCCCCCACTGATGGGACGAAGAAGCAGTCCATCAAGCC
TTTATCGTCTCCAACCTATTCTTTGGGCGGCATCAAGCGAAACGGAAATG
GTCTCTTAGGCGAGCTGCACCCAGATGATGTGGGTAAGAAATGCCTGGTC
CTCGACTTGGATGAGACATTGGCCCACTCATCTTTTCAGCCTGTGGAAGC
CGCAGACTTCGTTATTCCAATTGTAATTGAGGGGACACAGCACCAAGTGT
ACGTGTTAAAACGCCCGGGGGTCGATGAATTTATGCGGCGCGTGGCAAAG
GATTACGAGATTGTAATTTTTACAGCTTCCCTCGCTTTGTACGCAGATCC
TTTGCTTGATCAATTGGATTTACACAATGTGATCCGGCATCGGCTGTATC
GGGAGAGTTGCACATTCTTTCAAGGGTCCTATGTGAAGGACTTGACGAAG
CTAGGACGGGATGTGCGTCAGTGTATTTTGGTTGATAATAGCCCATTGTC
TTACATGTTTCAGCCAGAAAATGCGATTGGGTGTAGCTCGTATATTGACG
CTACGATGGACAAGGAGTTGGATGTGATTGCGGCTTTTTTGGAGGATGTG
AGAGATTGCGAGGATGTGAGGGAGCATTGTCGAGGTTGGCGGCAGTGGGG
GGCGTATGAAAGGAAGGGGAAGGCGTTGGCTGAGAAGAGGAGGGGGGTTA
TTGCAGGATGAAAGCAAGATAACTCGTGGGCATGCGGAAGGGGATAGATT
TAGCACAGCACAAACGCTGAGCGTCAGGAGATGTAAGAGTGCGGCACAAG
AGGAAGAAGAAGATAGATAGGGTAACAAATTAAGTGAGCAGCGGACAAAA
GAGAAAGCATGGGACGAGTAGGTGGAGAAACTAGGAGAGAAATTAGGAAG
AAAAAAAAGAATGAAGAGGATGCGTGCGTATGTGAATAATTGCATGTCAT
TTCGGTGTGTATGAGGGCACTTTAAATAGAAAAGAATTATAAATATATAT
ATATATATATACA
back to top

protein sequence of NO01G02030.1

>NO01G02030.1-protein ID=NO01G02030.1-protein|Name=NO01G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MSDVRRLSAKGAAGGLTIDTDAMPPVIVPPINVAAASPTGPNGTPRNWFG
KTSSGLADPRSWLQSPRKWANNRTPTNQGGNATPNTKKMVAYFNSLPHSE
KLMSRQEEEDGFKIGNSSGSSSSSSSSSSSSSTTTATITAASIPRALANL
MHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD
NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELH
PDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPG
VDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFF
QGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKEL
DVIAAFLEDVRDCEDVREHCRGWRQWGAYERKGKALAEKRRGVIAG*
back to top
Synonyms
Publications