NO01G02030, NO01G02030 (gene) Nannochloropsis oceanica

Overview
NameNO01G02030
Unique NameNO01G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1863
Alignment locationchr1:515182..517044 +

Link to JBrowse

Properties
Property NameValue
DescriptionNuclear lim factor interactor-interacting protein cleavage-specific form
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:515182..517044 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR004274NIF
Vocabulary: Molecular Function
TermDefinition
GO:0016791phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0016311dephosphorylation
Homology
BLAST of NO01G02030 vs. NCBI_GenBank
Match: EWM29185.1 (nuclear lim factor interactor-interacting protein cleavage-specific form [Nannochloropsis gaditana])

HSP 1 Score: 434.5 bits (1116), Expect = 4.000e-118
Identity = 250/432 (57.87%), Postives = 298/432 (68.98%), Query Frame = 0
Query:    1 MSDVRRLSAKGAAGGLTIDTDAMPPVIVPPINVAAASPTGPNGTPRNWFGKTSSGLADPRSWLQSPRKWANNRTPTNQGGNATPNTKKMVAYFNSL--PHSEKLMSRQEEEDGFKIXXXXXXXXXXXXXXXXXXXXXXXXXXXSIPRALANLMHQTDKDGKSQHVALS-PSPLHKEQHEQDEQAPVAGL--SLLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQWG 428
            M++ RR S +    GLTIDT+   P  V P    A +PTG  GTPR+WFG TSSGL DP          ANNRTPTNQGGN+TPNT+K+VAYFN+L  P  E+ ++  ++E   +                   XXXXXXXXX IP  LAN+MHQTDKDGKSQHVA   PS   + +H++ E AP       ++ R+ R      ++      T  S     +G  ++ + P         G  ++ + LLGE+H  D GKKCLVLDLDETL HSSFQPVE ADFVIPIVIEG+Q+QVYVLKRPGVD F+ RV +DYE+VIFTASL+LYADPLLD+LD+H VIRHRLYRESCTFFQGSYVKD+ +LGRD+ Q ILVDNSPLSYMFQPENAIGCSSYIDAT D EL VIAAFLEDV++CEDVREHCR WR+WG
Sbjct:    1 MTEQRRASFR----GLTIDTNT--PQHVNPQLSPAVTPTGSQGTPRSWFG-TSSGLTDPXXXXXXXXXXANNRTPTNQGGNSTPNTRKLVAYFNTLHKPKVEEFLNECDDEGNGR----------PSCSTSKKDXXXXXXXXXXIPSTLANIMHQTDKDGKSQHVAAQLPSSCQESEHQEVEPAPETSFFSRVVGRMARLNFSDGHDLEVRASTAPSSTLMKNGGHRRQVSPKPVKMSGPKGQSQSPD-LLGEVHAADRGKKCLVLDLDETLIHSSFQPVEDADFVIPIVIEGSQYQVYVLKRPGVDGFLERVGRDYEVVIFTASLSLYADPLLDELDVHKVIRHRLYRESCTFFQGSYVKDMRRLGRDISQVILVDNSPLSYMFQPENAIGCSSYIDATSDVELGVIAAFLEDVKECEDVREHCRNWRKWG 414          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: GAX10136.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [Fistulifera solaris])

HSP 1 Score: 253.8 bits (647), Expect = 9.700e-64
Identity = 126/211 (59.72%), Postives = 154/211 (72.99%), Query Frame = 0
Query:  217 TDGTKKQSIKPLSSPTYSLGGIKRNGN-GLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427
            +D   +++++    P  S   I   G  GLL ++HPDD GKKCLVLDLDETL HSSF+ V  ADFVIP+ IE   H VYV+KRPGVDEF+  +AK YEIVI+TASL  YADPLLD LD   VIR RL+RESC +++G+YVKDL+ L RD+ Q I++DNSP SY F PENAI CSS+ID   D+ELD IAAFL+ V+D EDVR  C  WR+W
Sbjct:  208 SDTDDRETVQSSMEPAKSKDSIIDCGRAGLLPDIHPDDTGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVMKRPGVDEFLVEMAKHYEIVIYTASLNKYADPLLDLLDPERVIRTRLFRESCVYYEGNYVKDLSLLDRDLSQAIIIDNSPSSYSFHPENAIDCSSFIDDPKDRELDQIAAFLKGVKDVEDVRGVCHLWREW 418          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: OQR86927.1 (NLI interacting factor-like phosphatase [Achlya hypogyna])

HSP 1 Score: 249.6 bits (636), Expect = 1.800e-62
Identity = 113/173 (65.32%), Postives = 139/173 (80.35%), Query Frame = 0
Query:  251 PDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            P D GKKCLVLDLDETL HSSF+P+   D++IP+ IEG  HQVYVLKRPGVDEFMR +A+ YEIV++TASL+ YADPLLDQLD+H VIR RL+RE C  ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+ELD I+AFL D+R  +DVR H   W
Sbjct:  156 PGDEGKKCLVLDLDETLVHSSFKPIHNPDYIIPVEIEGHVHQVYVLKRPGVDEFMRALAEHYEIVVYTASLSKYADPLLDQLDIHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSIIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISAFLTDIRHVDDVRNHLHKW 328          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_012200691.1 (hypothetical protein SPRG_06484 [Saprolegnia parasitica CBS 223.65] >KDO28629.1 hypothetical protein SPRG_06484 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 249.2 bits (635), Expect = 2.400e-62
Identity = 136/284 (47.89%), Postives = 179/284 (63.03%), Query Frame = 0
Query:  144 PRALANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPV---AGLS-LLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            P  LA+L+HQTD+ GK           H   H   +  P    AG S  +S+L  +I      +A  +P            K+Q     S  T     +++    ++    P D GKKCLVLDLDETL HSSF+P+   D++IP+ IEG  HQVYVLKRPGVDEFMR +A+ YEIV++TASL+ YADPLLDQLD+H VIR RL+RE C  ++GSYVKDL+ + RD+ Q +++DNSP+SY+F P NAIGCSS+ID   D+ELD I+AFL ++R  +DVR H   W
Sbjct:   65 PSPLASLVHQTDRHGK-----------HTSHHVDTKVRPTTTSAGQSGGISKLFANIC-----SALGLPEQQQQLQAQMLKKQQHQVEKSHETRQSIEVRK----IMSTPFPGDEGKKCLVLDLDETLVHSSFKPIHNPDYIIPVEIEGHVHQVYVLKRPGVDEFMRELAEHYEIVVYTASLSKYADPLLDQLDIHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSVIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISAFLTEIRSVDDVRNHLHRW 328          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_008620839.1 (protein phosphatase [Saprolegnia diclina VS20] >EQC25747.1 protein phosphatase [Saprolegnia diclina VS20])

HSP 1 Score: 248.8 bits (634), Expect = 3.100e-62
Identity = 136/283 (48.06%), Postives = 179/283 (63.25%), Query Frame = 0
Query:  144 PRALANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQA--PVAGLS-LLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            P  LA+L+HQTD+ GK           H   H  D +     AG S  +S+L  +I      +A  +P            K+      S  T     +++    ++    P D GKKCLVLDLDETL HSSF+P+   D++IP+ IEG  HQVYVLKRPGVDEFMR +A+ YEIV++TASL+ YADPLLDQLD+HNVIR RL+RE C  ++GSYVKDL+ + RD+ Q +++DNSP+SY+F P NAIGCSS+ID   D+ELD I+AFL ++R  +DVR H   W
Sbjct:   65 PSPLASLVHQTDRHGK-----------HTSSHHVDTKVRPTAAGQSGGISKLFANIC-----SALGLPEQQQQLQAQMLKKQAHQVEKSHETRQSIEVRK----IMSTPFPGDEGKKCLVLDLDETLVHSSFKPIHNPDYIIPVEIEGHVHQVYVLKRPGVDEFMRVLAEHYEIVVYTASLSKYADPLLDQLDIHNVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSVIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISAFLTEIRSVDDVRNHLHRW 327          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: OQS04298.1 (NLI interacting factor-like phosphatase [Thraustotheca clavata])

HSP 1 Score: 248.4 bits (633), Expect = 4.100e-62
Identity = 113/179 (63.13%), Postives = 142/179 (79.33%), Query Frame = 0
Query:  245 LLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            ++ +  P D GKKCLVLDLDETL HSSF+P+   D+VIP+ IEG  HQVYVLKRPGVDEFMR++A+ YEIV++TASL+ YADPLLDQLD+H VIR RL+RE C  ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+ELD I+ FL ++R  EDVR H   W
Sbjct:  138 IMSQPFPGDEGKKCLVLDLDETLVHSSFKPIHNPDYVIPVEIEGHVHQVYVLKRPGVDEFMRKLAEHYEIVVYTASLSKYADPLLDQLDIHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSIIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISDFLTEIRHVEDVRSHLHLW 316          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_008868173.1 (hypothetical protein H310_05278 [Aphanomyces invadans] >ETW02789.1 hypothetical protein H310_05278 [Aphanomyces invadans])

HSP 1 Score: 247.3 bits (630), Expect = 9.100e-62
Identity = 132/289 (45.67%), Postives = 174/289 (60.21%), Query Frame = 0
Query:  144 PRALANLMHQTDKDGK--------SQHVALSPSPLHKEQHEQDEQAPVAGLS-LLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            P  LA+L+HQTD+ GK        + H AL   P      +        G+S L + +   + L++                       + + +     S     +    ++G   P D GKKCLVLDLDETL HSSF+P+   D+VIP+ IEG  HQVYV KRPGVDEFMR++A+ YEIV++TASL+ YADPLLDQLD H VIR RL+RE C  ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+ELD I  FL ++R  +DVR HC  W
Sbjct:   74 PSPLASLVHQTDRHGKHSPHPQQHTSHDALKVKPTTSSSIDARNSQQPGGISKLFANICSCLGLAEQXXXXXXXXXXXXXXXXXXXXLSNHEKIVETRQS-----QEVRKIMGTKFPGDEGKKCLVLDLDETLVHSSFKPILNPDYVIPVEIEGHVHQVYVAKRPGVDEFMRKMAEFYEIVVYTASLSKYADPLLDQLDTHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSIIIDNSPMSYLFHPRNAIGCSSFIDDMDDRELDSITNFLTEIRAVDDVRNHCHKW 357          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_002176647.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51110.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 246.9 bits (629), Expect = 1.200e-61
Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 0
Query:  243 NGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427
            +GLL  LHPDD GKKCLVLDLDETL HSSF+ V  ADFVIP+ IE   H VYV KRPGVDEF+  +AK YEIVI+TASL  YADPLLD LD H  IR RL+RESC +++GSYVKDL+ L RD+ Q I++DNSP SY+F PENAI CSS+ID   D+ELD I+AFL+ ++D +DVR     WR W
Sbjct:    4 SGLLPTLHPDDRGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVAKRPGVDEFLIEMAKHYEIVIYTASLNKYADPLLDLLDPHQTIRMRLFRESCVYYEGSYVKDLSLLDRDLSQAIIIDNSPNSYVFHPENAIDCSSFIDDPRDRELDQISAFLKGIKDVKDVRGVAPRWRDW 187          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_009828774.1 (hypothetical protein H257_05562 [Aphanomyces astaci] >ETV82037.1 hypothetical protein H257_05562 [Aphanomyces astaci])

HSP 1 Score: 245.0 bits (624), Expect = 4.500e-61
Identity = 132/284 (46.48%), Postives = 174/284 (61.27%), Query Frame = 0
Query:  144 PRALANLMHQTDKDGK-SQHV---ALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424
            P  LA+L+HQTD+ GK S H    AL   P       ++ Q P     L + +   + L++ +                         +   T     ++R    ++    P D GKKCLVLDLDETL HSSF+P+   D+VIP+ IEG  HQVYV KRPGVDEFMR++A+ YEIV++TASL+ YADPLLDQLD H VIR RL+RE C  ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID   D+ELD I  FL ++R  +DVR +C  W
Sbjct:  114 PSPLASLVHQTDRHGKHSPHPHQDALKVKPTTSSIDTRNPQQPGGISKLFANICSCLGLAEQQXXXXXXXXXXXXXXXXXXXXXXXXXVE--TRQGQEVRR----IMSTPFPGDEGKKCLVLDLDETLVHSSFKPIPNPDYVIPVEIEGHVHQVYVAKRPGVDEFMRKMAEFYEIVVYTASLSKYADPLLDQLDTHKVIRFRLFREHCVHYEGSYVKDLSLIDRDINQSIIIDNSPMSYLFHPRNAIGCSSFIDDMDDRELDSITTFLTEIRGVDDVRNYCHKW 391          
BLAST of NO01G02030 vs. NCBI_GenBank
Match: GAX16191.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [Fistulifera solaris])

HSP 1 Score: 244.6 bits (623), Expect = 5.900e-61
Identity = 122/211 (57.82%), Postives = 150/211 (71.09%), Query Frame = 0
Query:  217 TDGTKKQSIKPLSSPTYSLGGIKRNGN-GLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427
            +D   +++++    P  S   I   G  GLL ++HPDD GKKCLVLDLDETL HSSF+ V  ADFVIP+ IE   H VYV+KRPGVDEF+  +AK YEIVI+TASL  YADPLLD LD   VIR RL+RESC +++G+YVKDL+ L RD+ Q I++DNSP SY F PENAI CSS+ID   D+ELD IAAFL+ V+D       C  WR+W
Sbjct:  206 SDTDDRETVQSSMEPAKSKDSIIDCGRAGLLPDIHPDDTGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVMKRPGVDEFLVEMAKHYEIVIYTASLNKYADPLLDLLDPERVIRTRLFRESCVYYEGNYVKDLSLLDRDLSQAIIIDNSPSSYSFHPENAIDCSSFIDDPKDRELDQIAAFLKGVKDXXXXXGVCHLWREW 416          
The following BLAST results are available for this feature:
BLAST of NO01G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29185.14.000e-11857.87nuclear lim factor interactor-interacting protein ... [more]
GAX10136.19.700e-6459.72carboxy-terminal domain RNA polymerase II polypept... [more]
OQR86927.11.800e-6265.32NLI interacting factor-like phosphatase [Achlya hy... [more]
XP_012200691.12.400e-6247.89hypothetical protein SPRG_06484 [Saprolegnia paras... [more]
XP_008620839.13.100e-6248.06protein phosphatase [Saprolegnia diclina VS20] >EQ... [more]
OQS04298.14.100e-6263.13NLI interacting factor-like phosphatase [Thraustot... [more]
XP_008868173.19.100e-6245.67hypothetical protein H310_05278 [Aphanomyces invad... [more]
XP_002176647.11.200e-6164.67predicted protein, partial [Phaeodactylum tricornu... [more]
XP_009828774.14.500e-6146.48hypothetical protein H257_05562 [Aphanomyces astac... [more]
GAX16191.15.900e-6157.82carboxy-terminal domain RNA polymerase II polypept... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G02030.1NO01G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576477gene_184Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g26gene1489Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G02030.1NO01G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G02030 ID=NO01G02030|Name=NO01G02030|organism=Nannochloropsis oceanica|type=gene|length=1863bp
CAGGCTACATTTAAGACAGCCATGTCAGATGTCAGGCGGCTCAGTGCCAA
GGgtaagtgtctgctgcgcccctcatctatctccctttgtccctcatgca
ggcaaggatccacctctctcactcccctgcctcttccacactcctctttg
cttgacccccactcccttcactcacactcccatggtttataccctatgct
ttttaattttctttgctccacttactcagaatcatacacacaaacacaca
gGCGCGGCTGGAGGACTGACCATAGATACTGATGCCATGCCACCCGTCAT
TGTCCCACCTATCAACGTCGCTGCTGCTTCCCCTACCGGACCAAATGGAA
CGCCGAGAAACTGGTTTGGAAAGACGTCGTCAGGTCTCGCAGATCCCCGC
TCCTGGCTGCAGTCACCTCGCAAATGGGCAAACAATCGAACCCCTACGAA
TCAAGGTGGTAACGCCACGCCCAACACAAAAAAAATGGTTGCATATTTCA
ATTCGTTGCCCCATTCGGAAAAATTGATGAGCAGACAGGAAGAGGAGGAT
GGATTTAAGATTGGCAACAGCAGCGGTAGCAGCAGCAGCAGCAGCAGCAG
CAGTAGCAGCAGCAGTACCACCACCGCCACCATAACCGCTGCTTCTATCC
CCAGGGCGCTGGCCAATCTCATGCACCAAACGGACAAGGACGGTAAATCC
CAGCACGTAGCTCTCTCACCATCTCCTCTCCATAAGGAACAACACGAGCA
AGACGAGCAGGCACCTGTCGCGGGGCTTTCCCTCTTAAGTCGCCTATTGC
GTTCAATACACCTCTCGGACAACGAGACCGCTACTTCGATTCCTACCGGT
ACTTCCCCCCCTTCCCCCACTGATGGGACGAAGAAGCAGTCCATCAAGCC
TTTATCGTCTCCAACCTATTCTTTGGGCGGCATCAAGCGAAACGGAAATG
GTCTCTTAGGCGAGCTGCACCCAGATGATGTGGGTAAGAAATGCCTGGTC
CTCGACTTGGATGAGACATTGGCCCACTCATCTTTTCAGCCTGTGGAAGC
CGCAGACTTCGTTATTCCAATTGTAATTGAGGGGACACAGCACCAAGTGT
ACGTGTTAAAACGCCCGGGGGTCGATGAATTTATGCGGCGCGTGGCAAAG
GATTACGAGATTGTAATTTTTACAGCTTCCCTCGCTTTGTACGCAGATCC
TTTGCTTGATCAATTGGATTTACACAATGTGATCCGGCATCGGCTGTATC
GGGAGAGTTGCACATTCTTTCAAGGGTCCTATGTGAAGGACTTGACGAAG
CTAGGACGGGATGTGCGTCAGTGTATTTTGGTTGATAATAGCCCATTGTC
TTACATGTTTCAGCCAGAAAATGCGATTGGGTGTAGCTCGTATATTGACG
CTACGATGGACAAGGAGTTGGATGTGATTGCGGCTTTTTTGGAGGATGTG
AGAGATTGCGAGGATGTGAGGGAGCATTGTCGAGGTTGGCGGCAGTGGGG
GGCGTATGAAAGGAAGGGGAAGGCGTTGGCTGAGAAGAGGAGGGGGGTTA
TTGCAGGATGAAAGCAAGATAACTCGTGGGCATGCGGAAGGGGATAGATT
TAGCACAGCACAAACGCTGAGCGTCAGGAGATGTAAGAGTGCGGCACAAG
AGGAAGAAGAAGATAGATAGGGTAACAAATTAAGTGAGCAGCGGACAAAA
GAGAAAGCATGGGACGAGTAGGTGGAGAAACTAGGAGAGAAATTAGGAAG
AAAAAAAAGAATGAAGAGGATGCGTGCGTATGTGAATAATTGCATGTCAT
TTCGGTGTGTATGAGGGCACTTTAAATAGAAAAGAATTATAAATATATAT
ATATATATATACA
back to top

protein sequence of NO01G02030.1

>NO01G02030.1-protein ID=NO01G02030.1-protein|Name=NO01G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MSDVRRLSAKGAAGGLTIDTDAMPPVIVPPINVAAASPTGPNGTPRNWFG
KTSSGLADPRSWLQSPRKWANNRTPTNQGGNATPNTKKMVAYFNSLPHSE
KLMSRQEEEDGFKIGNSSGSSSSSSSSSSSSSTTTATITAASIPRALANL
MHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSD
NETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELH
PDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPG
VDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFF
QGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKEL
DVIAAFLEDVRDCEDVREHCRGWRQWGAYERKGKALAEKRRGVIAG*
back to top
Synonyms
Publications