NO01G02030, NO01G02030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02030 vs. NCBI_GenBank
Match: EWM29185.1 (nuclear lim factor interactor-interacting protein cleavage-specific form [Nannochloropsis gaditana]) HSP 1 Score: 434.5 bits (1116), Expect = 4.000e-118 Identity = 250/432 (57.87%), Postives = 298/432 (68.98%), Query Frame = 0 Query: 1 MSDVRRLSAKGAAGGLTIDTDAMPPVIVPPINVAAASPTGPNGTPRNWFGKTSSGLADPRSWLQSPRKWANNRTPTNQGGNATPNTKKMVAYFNSL--PHSEKLMSRQEEEDGFKIXXXXXXXXXXXXXXXXXXXXXXXXXXXSIPRALANLMHQTDKDGKSQHVALS-PSPLHKEQHEQDEQAPVAGL--SLLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQWG 428 M++ RR S + GLTIDT+ P V P A +PTG GTPR+WFG TSSGL DP ANNRTPTNQGGN+TPNT+K+VAYFN+L P E+ ++ ++E + XXXXXXXXX IP LAN+MHQTDKDGKSQHVA PS + +H++ E AP ++ R+ R ++ T S +G ++ + P G ++ + LLGE+H D GKKCLVLDLDETL HSSFQPVE ADFVIPIVIEG+Q+QVYVLKRPGVD F+ RV +DYE+VIFTASL+LYADPLLD+LD+H VIRHRLYRESCTFFQGSYVKD+ +LGRD+ Q ILVDNSPLSYMFQPENAIGCSSYIDAT D EL VIAAFLEDV++CEDVREHCR WR+WG Sbjct: 1 MTEQRRASFR----GLTIDTNT--PQHVNPQLSPAVTPTGSQGTPRSWFG-TSSGLTDPXXXXXXXXXXANNRTPTNQGGNSTPNTRKLVAYFNTLHKPKVEEFLNECDDEGNGR----------PSCSTSKKDXXXXXXXXXXIPSTLANIMHQTDKDGKSQHVAAQLPSSCQESEHQEVEPAPETSFFSRVVGRMARLNFSDGHDLEVRASTAPSSTLMKNGGHRRQVSPKPVKMSGPKGQSQSPD-LLGEVHAADRGKKCLVLDLDETLIHSSFQPVEDADFVIPIVIEGSQYQVYVLKRPGVDGFLERVGRDYEVVIFTASLSLYADPLLDELDVHKVIRHRLYRESCTFFQGSYVKDMRRLGRDISQVILVDNSPLSYMFQPENAIGCSSYIDATSDVELGVIAAFLEDVKECEDVREHCRNWRKWG 414
BLAST of NO01G02030 vs. NCBI_GenBank
Match: GAX10136.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [Fistulifera solaris]) HSP 1 Score: 253.8 bits (647), Expect = 9.700e-64 Identity = 126/211 (59.72%), Postives = 154/211 (72.99%), Query Frame = 0 Query: 217 TDGTKKQSIKPLSSPTYSLGGIKRNGN-GLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427 +D +++++ P S I G GLL ++HPDD GKKCLVLDLDETL HSSF+ V ADFVIP+ IE H VYV+KRPGVDEF+ +AK YEIVI+TASL YADPLLD LD VIR RL+RESC +++G+YVKDL+ L RD+ Q I++DNSP SY F PENAI CSS+ID D+ELD IAAFL+ V+D EDVR C WR+W Sbjct: 208 SDTDDRETVQSSMEPAKSKDSIIDCGRAGLLPDIHPDDTGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVMKRPGVDEFLVEMAKHYEIVIYTASLNKYADPLLDLLDPERVIRTRLFRESCVYYEGNYVKDLSLLDRDLSQAIIIDNSPSSYSFHPENAIDCSSFIDDPKDRELDQIAAFLKGVKDVEDVRGVCHLWREW 418
BLAST of NO01G02030 vs. NCBI_GenBank
Match: OQR86927.1 (NLI interacting factor-like phosphatase [Achlya hypogyna]) HSP 1 Score: 249.6 bits (636), Expect = 1.800e-62 Identity = 113/173 (65.32%), Postives = 139/173 (80.35%), Query Frame = 0 Query: 251 PDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424 P D GKKCLVLDLDETL HSSF+P+ D++IP+ IEG HQVYVLKRPGVDEFMR +A+ YEIV++TASL+ YADPLLDQLD+H VIR RL+RE C ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID D+ELD I+AFL D+R +DVR H W Sbjct: 156 PGDEGKKCLVLDLDETLVHSSFKPIHNPDYIIPVEIEGHVHQVYVLKRPGVDEFMRALAEHYEIVVYTASLSKYADPLLDQLDIHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSIIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISAFLTDIRHVDDVRNHLHKW 328
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_012200691.1 (hypothetical protein SPRG_06484 [Saprolegnia parasitica CBS 223.65] >KDO28629.1 hypothetical protein SPRG_06484 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 249.2 bits (635), Expect = 2.400e-62 Identity = 136/284 (47.89%), Postives = 179/284 (63.03%), Query Frame = 0 Query: 144 PRALANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQAPV---AGLS-LLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424 P LA+L+HQTD+ GK H H + P AG S +S+L +I +A +P K+Q S T +++ ++ P D GKKCLVLDLDETL HSSF+P+ D++IP+ IEG HQVYVLKRPGVDEFMR +A+ YEIV++TASL+ YADPLLDQLD+H VIR RL+RE C ++GSYVKDL+ + RD+ Q +++DNSP+SY+F P NAIGCSS+ID D+ELD I+AFL ++R +DVR H W Sbjct: 65 PSPLASLVHQTDRHGK-----------HTSHHVDTKVRPTTTSAGQSGGISKLFANIC-----SALGLPEQQQQLQAQMLKKQQHQVEKSHETRQSIEVRK----IMSTPFPGDEGKKCLVLDLDETLVHSSFKPIHNPDYIIPVEIEGHVHQVYVLKRPGVDEFMRELAEHYEIVVYTASLSKYADPLLDQLDIHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSVIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISAFLTEIRSVDDVRNHLHRW 328
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_008620839.1 (protein phosphatase [Saprolegnia diclina VS20] >EQC25747.1 protein phosphatase [Saprolegnia diclina VS20]) HSP 1 Score: 248.8 bits (634), Expect = 3.100e-62 Identity = 136/283 (48.06%), Postives = 179/283 (63.25%), Query Frame = 0 Query: 144 PRALANLMHQTDKDGKSQHVALSPSPLHKEQHEQDEQA--PVAGLS-LLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424 P LA+L+HQTD+ GK H H D + AG S +S+L +I +A +P K+ S T +++ ++ P D GKKCLVLDLDETL HSSF+P+ D++IP+ IEG HQVYVLKRPGVDEFMR +A+ YEIV++TASL+ YADPLLDQLD+HNVIR RL+RE C ++GSYVKDL+ + RD+ Q +++DNSP+SY+F P NAIGCSS+ID D+ELD I+AFL ++R +DVR H W Sbjct: 65 PSPLASLVHQTDRHGK-----------HTSSHHVDTKVRPTAAGQSGGISKLFANIC-----SALGLPEQQQQLQAQMLKKQAHQVEKSHETRQSIEVRK----IMSTPFPGDEGKKCLVLDLDETLVHSSFKPIHNPDYIIPVEIEGHVHQVYVLKRPGVDEFMRVLAEHYEIVVYTASLSKYADPLLDQLDIHNVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSVIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISAFLTEIRSVDDVRNHLHRW 327
BLAST of NO01G02030 vs. NCBI_GenBank
Match: OQS04298.1 (NLI interacting factor-like phosphatase [Thraustotheca clavata]) HSP 1 Score: 248.4 bits (633), Expect = 4.100e-62 Identity = 113/179 (63.13%), Postives = 142/179 (79.33%), Query Frame = 0 Query: 245 LLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424 ++ + P D GKKCLVLDLDETL HSSF+P+ D+VIP+ IEG HQVYVLKRPGVDEFMR++A+ YEIV++TASL+ YADPLLDQLD+H VIR RL+RE C ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID D+ELD I+ FL ++R EDVR H W Sbjct: 138 IMSQPFPGDEGKKCLVLDLDETLVHSSFKPIHNPDYVIPVEIEGHVHQVYVLKRPGVDEFMRKLAEHYEIVVYTASLSKYADPLLDQLDIHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSIIIDNSPMSYLFHPRNAIGCSSFIDDLDDRELDSISDFLTEIRHVEDVRSHLHLW 316
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_008868173.1 (hypothetical protein H310_05278 [Aphanomyces invadans] >ETW02789.1 hypothetical protein H310_05278 [Aphanomyces invadans]) HSP 1 Score: 247.3 bits (630), Expect = 9.100e-62 Identity = 132/289 (45.67%), Postives = 174/289 (60.21%), Query Frame = 0 Query: 144 PRALANLMHQTDKDGK--------SQHVALSPSPLHKEQHEQDEQAPVAGLS-LLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424 P LA+L+HQTD+ GK + H AL P + G+S L + + + L++ + + + S + ++G P D GKKCLVLDLDETL HSSF+P+ D+VIP+ IEG HQVYV KRPGVDEFMR++A+ YEIV++TASL+ YADPLLDQLD H VIR RL+RE C ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID D+ELD I FL ++R +DVR HC W Sbjct: 74 PSPLASLVHQTDRHGKHSPHPQQHTSHDALKVKPTTSSSIDARNSQQPGGISKLFANICSCLGLAEQXXXXXXXXXXXXXXXXXXXXLSNHEKIVETRQS-----QEVRKIMGTKFPGDEGKKCLVLDLDETLVHSSFKPILNPDYVIPVEIEGHVHQVYVAKRPGVDEFMRKMAEFYEIVVYTASLSKYADPLLDQLDTHKVIRFRLFREHCVHYEGSYVKDLSLIDRDITQSIIIDNSPMSYLFHPRNAIGCSSFIDDMDDRELDSITNFLTEIRAVDDVRNHCHKW 357
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_002176647.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51110.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 246.9 bits (629), Expect = 1.200e-61 Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 0 Query: 243 NGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427 +GLL LHPDD GKKCLVLDLDETL HSSF+ V ADFVIP+ IE H VYV KRPGVDEF+ +AK YEIVI+TASL YADPLLD LD H IR RL+RESC +++GSYVKDL+ L RD+ Q I++DNSP SY+F PENAI CSS+ID D+ELD I+AFL+ ++D +DVR WR W Sbjct: 4 SGLLPTLHPDDRGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVAKRPGVDEFLIEMAKHYEIVIYTASLNKYADPLLDLLDPHQTIRMRLFRESCVYYEGSYVKDLSLLDRDLSQAIIIDNSPNSYVFHPENAIDCSSFIDDPRDRELDQISAFLKGIKDVKDVRGVAPRWRDW 187
BLAST of NO01G02030 vs. NCBI_GenBank
Match: XP_009828774.1 (hypothetical protein H257_05562 [Aphanomyces astaci] >ETV82037.1 hypothetical protein H257_05562 [Aphanomyces astaci]) HSP 1 Score: 245.0 bits (624), Expect = 4.500e-61 Identity = 132/284 (46.48%), Postives = 174/284 (61.27%), Query Frame = 0 Query: 144 PRALANLMHQTDKDGK-SQHV---ALSPSPLHKEQHEQDEQAPVAGLSLLSRLLRSIHLSDNETATSIPTGTSPPSPTDGTKKQSIKPLSSPTYSLGGIKRNGNGLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGW 424 P LA+L+HQTD+ GK S H AL P ++ Q P L + + + L++ + + T ++R ++ P D GKKCLVLDLDETL HSSF+P+ D+VIP+ IEG HQVYV KRPGVDEFMR++A+ YEIV++TASL+ YADPLLDQLD H VIR RL+RE C ++GSYVKDL+ + RD+ Q I++DNSP+SY+F P NAIGCSS+ID D+ELD I FL ++R +DVR +C W Sbjct: 114 PSPLASLVHQTDRHGKHSPHPHQDALKVKPTTSSIDTRNPQQPGGISKLFANICSCLGLAEQQXXXXXXXXXXXXXXXXXXXXXXXXXVE--TRQGQEVRR----IMSTPFPGDEGKKCLVLDLDETLVHSSFKPIPNPDYVIPVEIEGHVHQVYVAKRPGVDEFMRKMAEFYEIVVYTASLSKYADPLLDQLDTHKVIRFRLFREHCVHYEGSYVKDLSLIDRDINQSIIIDNSPMSYLFHPRNAIGCSSFIDDMDDRELDSITTFLTEIRGVDDVRNYCHKW 391
BLAST of NO01G02030 vs. NCBI_GenBank
Match: GAX16191.1 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [Fistulifera solaris]) HSP 1 Score: 244.6 bits (623), Expect = 5.900e-61 Identity = 122/211 (57.82%), Postives = 150/211 (71.09%), Query Frame = 0 Query: 217 TDGTKKQSIKPLSSPTYSLGGIKRNGN-GLLGELHPDDVGKKCLVLDLDETLAHSSFQPVEAADFVIPIVIEGTQHQVYVLKRPGVDEFMRRVAKDYEIVIFTASLALYADPLLDQLDLHNVIRHRLYRESCTFFQGSYVKDLTKLGRDVRQCILVDNSPLSYMFQPENAIGCSSYIDATMDKELDVIAAFLEDVRDCEDVREHCRGWRQW 427 +D +++++ P S I G GLL ++HPDD GKKCLVLDLDETL HSSF+ V ADFVIP+ IE H VYV+KRPGVDEF+ +AK YEIVI+TASL YADPLLD LD VIR RL+RESC +++G+YVKDL+ L RD+ Q I++DNSP SY F PENAI CSS+ID D+ELD IAAFL+ V+D C WR+W Sbjct: 206 SDTDDRETVQSSMEPAKSKDSIIDCGRAGLLPDIHPDDTGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVMKRPGVDEFLVEMAKHYEIVIYTASLNKYADPLLDLLDPERVIRTRLFRESCVYYEGNYVKDLSLLDRDLSQAIIIDNSPSSYSFHPENAIDCSSFIDDPKDRELDQIAAFLKGVKDXXXXXGVCHLWREW 416 The following BLAST results are available for this feature:
BLAST of NO01G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02030 ID=NO01G02030|Name=NO01G02030|organism=Nannochloropsis oceanica|type=gene|length=1863bpback to top protein sequence of NO01G02030.1 >NO01G02030.1-protein ID=NO01G02030.1-protein|Name=NO01G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bpback to top Synonyms
Publications
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