NO01G01920, NO01G01920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01920 vs. NCBI_GenBank
Match: EWM29116.1 (nucleotide sugar transporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 488.8 bits (1257), Expect = 1.400e-134 Identity = 268/348 (77.01%), Postives = 294/348 (84.48%), Query Frame = 0 Query: 1 MLDMTTVFAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNVRYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYTELKRQVS-SQGLVTVVNGSSSSSSRG--GMQYSKLETHKDMIPDGEVGEARMLEMLSGPMKV 346 MLDMTT+FAM GNVGSVVGVVIMNKYIV++DAFNFM+FLSFTHFVFTY GC VLL FF YKPAP+RGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTI LER FYGKTVPGP+L+TLIPITIGVGIATVNDV+VN VGT FA AVL TYQKQLDCDALQLLYHSSPLIA G F MIPFFDNVRYLV+T S+ L+NHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVF Y+SN RAV+GI++ALGGVIAYTELKR++S QG ++ S S RG G+ YSK+ ++ IPDGE+G A LE++ G MKV Sbjct: 1 MLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLXXXXXXXXXXTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEE-IPDGEIGGAGRLELM-GAMKV 346
BLAST of NO01G01920 vs. NCBI_GenBank
Match: EWM29117.1 (nucleotide sugar transporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 457.6 bits (1176), Expect = 3.400e-125 Identity = 251/329 (76.29%), Postives = 276/329 (83.89%), Query Frame = 0 Query: 20 VVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNVRYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYTELKRQVS-SQGLVTVVNGSSSSSSRG--GMQYSKLETHKDMIPDGEVGEARMLEMLSGPMKV 346 VVIMNKYIV++DAFNFM+FLSFTHFVFTY GC VLL FF YKPAP+RGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTI LER FYGKTVPGP+L+TLIPITIGVGIATVNDV+VN VGT FA AVL TYQKQLDCDALQLLYHSSPLIA G F MIPFFDNVRYLV+T S+ L+NHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVF Y+SN RAV+GI++ALGGVIAYTELKR++S QG ++ S S RG G+ YSK+ ++ IPDGE+G A LE++ G MKV Sbjct: 67 VVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLXXXXXXXXXXTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMSSSHSGLRRGFEGLSYSKVAADEE-IPDGEIGGAGRLELM-GAMKV 393
BLAST of NO01G01920 vs. NCBI_GenBank
Match: CEP03463.1 (hypothetical protein PBRA_003221 [Plasmodiophora brassicae]) HSP 1 Score: 288.1 bits (736), Expect = 3.600e-74 Identity = 165/331 (49.85%), Postives = 223/331 (67.37%), Query Frame = 0 Query: 2 LDMTTVFAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNVRYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYTELKRQVSSQGLVTVVNGSSSSSSRGGMQYSKLETHKDMIPDGEVGE 333 ++ + +V N+ S VG+VI NK++ S FNF+ LSF HFV T LL RFF YKPAPL GV+PVA+G+LGSVAFMNLNLA NSVGFYQ+SKLACIP T+ L+ + + K V +L+ I +GVGI+TV DV VNF+G +A AV FT+L QI+T + Q+QL D++QLL+HSSP+IA GMF I FD+V L++ E++ V + +CVLA+GVN+SNYLV+GKTSP+TYQV+GH KT L+LVLGF+ F LR++ GIV+A+ GVI Y E+KR V ++S+ + SK + D DG++ + Sbjct: 3 IESVVLAGIVANIASSVGIVITNKFVWSAHGFNFVATLSFLHFVTTALATRTLLAARFFEYKPAPLAGVMPVAIGTLGSVAFMNLNLAANSVGFYQISKLACIPATLILQYLLFKKQVSEKTRYSLLVILLGVGISTVTDVNVNFIGMAYALIAVAFTALGQIYTGSSQQQLGLDSMQLLHHSSPIIAVGMFVCIFLFDDVGALLQFEYTSSAVFLIALTCVLAVGVNVSNYLVIGKTSPITYQVVGHSKTCLVLVLGFLAFSTPVTLRSIAGIVIAMAGVIWYGEVKR----------VESNASAKLPQYVSVSKNDIALDTFDDGKLSD 323
BLAST of NO01G01920 vs. NCBI_GenBank
Match: XP_021862802.1 (UDP-xylose transporter 3-like [Spinacia oleracea] >KNA15203.1 hypothetical protein SOVF_100440 [Spinacia oleracea]) HSP 1 Score: 195.7 bits (496), Expect = 2.400e-46 Identity = 123/309 (39.81%), Postives = 188/309 (60.84%), Query Frame = 0 Query: 6 TVFAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNV---RYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYT-----ELKRQVSSQGLVTVVNGSSS 307 TV A+ +V S V +VI NK ++S FNF L+ H + T+ V LK + F +KP + VL + + S+ +NL+L NSVGFYQ++KLA IP T+FLE VF+ K I +L + +GVGIATV D+ +N +G+ + AV+ T +AQI T+T QK+ + QLLY SSP A + PF D + + + +++ ++ ++ SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+++ H + R ++GI+VALGG+I Y+ E +++ S ++ V G S Sbjct: 15 TVGALSLSVVSSVSIVICNKALISTLGFNFATTLTSWHLLVTFCSLHVALKMKLFEHKPFERKAVLGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVFLETVFFKKKFSRSIQSSLAVLLMGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSSPYQAATLLVSGPFLDKLLTSQDVFTFKYTTQVLMFIIVSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILVALGGMILYSYYCTRETQKKASEAAPLSQVKGDES 323
BLAST of NO01G01920 vs. NCBI_GenBank
Match: CUG92987.1 (triose phosphate transporter, putative [Bodo saltans]) HSP 1 Score: 194.5 bits (493), Expect = 5.400e-46 Identity = 118/283 (41.70%), Postives = 168/283 (59.36%), Query Frame = 0 Query: 8 FAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNVRYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYTELKR 291 F + N S +G+V+ NK + + F + L+F HFV TY G V + F K L +LP+ L G VA N++L +NSVGFYQL K+ P+ F++ FY T P+ +L I +GV IATV D N VGT+ A A+L T++ QI+ T QK+L+C++ QLLY +P+ A + +IP DN+ L + + +V +L S +LA VN+S +LV+G TSP+TY VLGH K +ILVLGF+VF + V GIVV + GV+ YT LK+ Sbjct: 19 FYLFLNAASSIGIVVTNKLVFQVYNFKYGTLLTFIHFVITYLGLEVCRRLGVFEKKSVDLWKILPLCLSFCGFVALTNISLVYNSVGFYQLMKVLTTPLIAFIQTFFYNTTFTTPVKASLTIICVGVAIATVTDTDANMVGTLVATSALLVTAMYQIWVGTKQKELECNSYQLLYLQAPISAAILIPLIPLLDNLSTLTEIPSNETIV-AILVSSILAFLVNLSIFLVIGSTSPITYNVLGHFKLTVILVLGFLVFGAPLTPQNVTGIVVTISGVVWYTHLKQ 300
BLAST of NO01G01920 vs. NCBI_GenBank
Match: XP_021737947.1 (UDP-xylose transporter 3-like [Chenopodium quinoa]) HSP 1 Score: 191.8 bits (486), Expect = 3.500e-45 Identity = 122/309 (39.48%), Postives = 186/309 (60.19%), Query Frame = 0 Query: 6 TVFAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNV---RYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYT-----ELKRQVSSQGLVTVVNGSSS 307 TV A+ +V S V +VI NK ++S F+F L+ H + T+ V LK + F +KP + VL + + S+ +NL+L NSVGFYQ++KLA IP T+FLE VF+ K I +L + IGVGIATV D+ +N +G+ + AV+ T +AQI T+T QK+ + QLLY SSP A + PF D + + + ++ ++ ++ SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+++ H + R ++GI++AL G+I Y+ E +R+ S ++ V G S Sbjct: 12 TVGALSLSVVSSVSIVICNKALISTLGFHFATTLTSWHLLVTFCSLHVALKMKLFEHKPFERKAVLGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVFLETVFFKKQFSRSIQSSLAVLLIGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSSPYQAATLLISGPFLDKLLTNQNVFTFNYTTQVLIFIIISCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILIALVGMILYSYYCTRETQRKASEPAPLSQVKGGES 320
BLAST of NO01G01920 vs. NCBI_GenBank
Match: XP_021758207.1 (UDP-xylose transporter 3-like [Chenopodium quinoa]) HSP 1 Score: 191.4 bits (485), Expect = 4.600e-45 Identity = 121/309 (39.16%), Postives = 185/309 (59.87%), Query Frame = 0 Query: 6 TVFAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNV---RYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYT-----ELKRQVSSQGLVTVVNGSSS 307 TV A+ +V S V +VI NK ++S F F L+ H + T+ V LK + F +KP + VL + + S+ +NL+L NSVGFYQ++KLA IP T+FLE VF+ K I +L + IGVGIATV D+ +N +G+ + AV+ T +AQI T+T QK+ + QLLY SSP A + PF D + + + ++ ++ ++ SC++A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+++ H + R ++GI++AL G+I Y+ E +++ S ++ V G S Sbjct: 12 TVGALSLSVVSSVSIVICNKALISTLGFQFATTLTSWHLLVTFCSLHVALKMKLFEHKPFERKAVLGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVFLETVFFKKQFSRSIQSSLAVLLIGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSSPYQAATLLISGPFLDKLLTNQNVFTFNYTTQVLTFIIISCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGILIALVGMILYSYYCTRETQKKASEPAPLSQVKGDES 320
BLAST of NO01G01920 vs. NCBI_GenBank
Match: CUF15972.1 (transmembrane protein, putative [Bodo saltans]) HSP 1 Score: 190.7 bits (483), Expect = 7.800e-45 Identity = 115/284 (40.49%), Postives = 170/284 (59.86%), Query Frame = 0 Query: 8 FAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNVRYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYTELKRQ 292 F + N S +G+V NK + + F + L+F HF+FT+ G + + F K L+ +LP+ + G VA NL+L +NSVGFYQL K+ P+ + ++ +FY +T P I L+L +GV IATV D N +GT+ A A+L T + QI+ T QK+L+C++ QLLY +P+ A + +IP D++ L + S V ++ S +LA VNIS +LV+GKTSP+TY VLGH K +IL LGFVVF+ + R + G++V L GV YT +K Q Sbjct: 21 FYLALNACSSIGIVFSNKVVFQVYNFKYGTLLTFIHFIFTFVGLEICRQCGMFELKRIDLKKILPLCVSFCGFVALTNLSLVYNSVGFYQLMKVLTTPIIVVIQTLFYNETFPTNIKLSLALTCVGVAIATVTDSEANLIGTLVAISALLVTCMYQIWVGTKQKELECNSYQLLYWQAPISAVILVPIIPLLDDLSTLSEWPNS-DAVTAIIISSLLAFLVNISIFLVIGKTSPVTYNVLGHFKLTIILTLGFVVFNAHVDYRNIAGVLVTLSGVFWYTHIKTQ 303
BLAST of NO01G01920 vs. NCBI_GenBank
Match: XP_023872486.1 (UDP-xylose transporter 3-like [Quercus suber] >POE85829.1 putative membrane protein [Quercus suber]) HSP 1 Score: 190.3 bits (482), Expect = 1.000e-44 Identity = 118/293 (40.27%), Postives = 180/293 (61.43%), Query Frame = 0 Query: 6 TVFAMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNV---RYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYTELKRQVSSQ 296 TV A+ +V S V +VI NK ++S F+F L+ H + T+ V LK +FF +K V+ + + S+ +NL+L NSVGFYQ++KLA IP T+ LE +F GK I L LI + +GVGIATV DV +N +G++ + A++ T +AQI T+T QK+ + QLLY S P AG + PF D + + + +++ +V ++ SC++++ VN S +LV+GKTSP+TYQVLGHLKT L+L G+V+ H N R ++GI++AL G++ Y+ + S Q Sbjct: 11 TVGALSLSVVSSVSIVICNKALMSSLGFHFATTLTSWHLLVTFCSLHVALKMKFFEHKAFDQSAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETLFLGKRFSRTIQLALIILLLGVGIATVTDVQLNALGSILSLLAIVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAGTLLITGPFLDGLLTDQNVFAFKYTSQVVAFIILSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFNWRNILGILIALIGMVLYSYFCTRESQQ 303
BLAST of NO01G01920 vs. NCBI_GenBank
Match: XP_022850975.1 (UDP-xylose transporter 1 [Olea europaea var. sylvestris]) HSP 1 Score: 189.5 bits (480), Expect = 1.700e-44 Identity = 125/315 (39.68%), Postives = 191/315 (60.63%), Query Frame = 0 Query: 9 AMVGNVGSVVGVVIMNKYIVSIDAFNFMVFLSFTHFVFTYFGCCVLLKFRFFTYKPAPLRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIFLERVFYGKTVPGPILLTLIPITIGVGIATVNDVTVNFVGTVFAGFAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAGGMFCMIPFFDNV---RYLVKTEFSIPLVNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFHYESNLRAVIGIVVALGGVIAYT-----ELKRQ----VSSQGLVTVV--NGSSSSSS 310 A+ +V S V +VI NK ++S F F L+ H + TY V L+ FF KP ++ ++ + + SV F+NL+L NS+GFYQ++KLA IP T+ LE +F K I L+L + +GVGIA++ D+ +NFVG++ + A+L T + QI T+T QK+L+ + QLLY S+P A +F PF D + + ++S ++ +L SCV+A+ VN S +LV+GKTSP+TYQVLGHLKT L+L G+ + H N R ++GI++A+ G+ Y+ E K++ VSS V ++ N S+ SSS Sbjct: 16 ALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLIVTYCSLHVALRLNFFENKPIDMKTIMLFGILNGISVGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLKKQFSQKIKLSLFVLLLGVGIASITDLQLNFVGSILSLLAILTTCVGQILTNTIQKRLNVSSTQLLYQSAPFQAAVLFVSGPFVDQCLTKQNVFAHKYSTVVLAFILLSCVIAVFVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFNARNILGILIAIIGMGLYSYFCTNESKKKQGGDVSSMPQVLMIKKNRSALSSS 330 The following BLAST results are available for this feature:
BLAST of NO01G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01920 ID=NO01G01920|Name=NO01G01920|organism=Nannochloropsis oceanica|type=gene|length=3383bpback to top protein sequence of NO01G01920.1 >NO01G01920.1-protein ID=NO01G01920.1-protein|Name=NO01G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bpback to top Synonyms
Publications
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