NO01G01910, NO01G01910 (gene) Nannochloropsis oceanica

Overview
NameNO01G01910
Unique NameNO01G01910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1227
Alignment locationchr1:482153..483379 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp synthase mitochondrial f1 complex assembly factor 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:482153..483379 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0043461proton-transporting ATP synthase complex assembly
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR011419ATP12_ATPase-F1F0-assembly
Homology
BLAST of NO01G01910 vs. NCBI_GenBank
Match: EWM29190.1 (atp synthase mitochondrial f1 complex assembly factor 2 [Nannochloropsis gaditana])

HSP 1 Score: 572.4 bits (1474), Expect = 1.100e-159
Identity = 305/424 (71.93%), Postives = 340/424 (80.19%), Query Frame = 0
Query:    1 MSATLKATCRFSALLRRALQVQTHHLSPAPFVQQQQNPHTLLVSSAPFNNITS-------------TAFTSTPTRASFSVSSSSSSTHKSEDVLPFPHVGGRPTDEEMAAEDAAAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAEEEKGSKK---AKAGLMPHQELRARVKARLRKEFPESTPK 409
            MS   +A+ RF+  LR   Q Q    +  P   + Q+ H L   S+    I S              A    P  ++   S SS+ST   +DV P PH+GGRP+DEEMAAEDAAA AE +ESHMKDGLAIKMATSSF GRRRFYK+VGVRPSLD +G+ V HYEVTLDGYPLKTPGTEK YRLPT+GLALAVALEWDQQVTYKG+EPTYMPLTG+ATIALDEI+FSR STIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQK WEPLL WL+DE+GVHI KP+HML VCHN+PETL+KV +MLQEMDPFTLAAFLSLVLDLKSVITALA+VFRHVT+EEACQASALEE HQKAAWGSVDLYHELEETVLY+Q AAASSFLWLL EEE G  K     AG+MPH EL+ARVKARL+KEFP+STP+
Sbjct:    1 MSTVPRASLRFTRTLRGPGQRQIRGRNSTP---RSQSRHALTYHSSLTAGIASWGPVVRHAASLAPLACNGLPRSSACRCSFSSTST---QDVPPLPHMGGRPSDEEMAAEDAAAAAEMEESHMKDGLAIKMATSSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEAGDSKELGKNAGVMPHVELKARVKARLKKEFPDSTPE 418          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: CBJ25926.1 (similar to ATP synthase mitochondrial F1 complex assembly factor 2 [Ectocarpus siliculosus])

HSP 1 Score: 173.3 bits (438), Expect = 1.500e-39
Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 0
Query:  126 GRRRFYKSVGVRPSL-----DEA------GKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWL 370
            GR RFYK+V +R  +     DEA      G     +E+ LD   LKTPG  +P +  +  LA+AVA EWD Q T KGIEP  MPL  +A+ ALD++   R+ T+  CL+YL TDTVC+  P  + D  + RRQ++ W PL  W ++  G+ +A  + +     + PE L +   +L+ +D + LAA  S  ++ KS++ ALA++FR  T+E+A  A+ LEE +    WG ++  H+++         AAS+ +WL
Sbjct:   89 GRSRFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVLKTPG-RRPLQFDSPELAMAVAAEWDAQDTSKGIEPAVMPLMALASTALDQVASDREKTVATCLKYLPTDTVCFLSP--DPDPVIARRQRQLWSPLRDWTEEALGIPVATTTEIHRTPQHPPEALARARDLLESLDEWGLAAVQSATMECKSLVIALALLFRKTTVEKAFDAARLEEEYNVERWGMIEGGHDMDRANTTLTLTAASTLIWL 340          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_008872988.1 (hypothetical protein H310_08857 [Aphanomyces invadans] >ETV98113.1 hypothetical protein H310_08857 [Aphanomyces invadans])

HSP 1 Score: 157.1 bits (396), Expect = 1.100e-34
Identity = 102/273 (37.36%), Postives = 148/273 (54.21%), Query Frame = 0
Query:  101 AAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373
            +A AE     +  G   K+A     GR RFYK+VG+    D        Y +TLDG  ++TP +    +LPTK LA AVA EWD Q  ++ I+PT MP+  +A+ ALD   F     I+  ++YL TDT+  CFP E +   KL  RQ+K W+PL  W + E+G  +      +    ++P  ++ V   +  MD F L AF  +V + KS++ ALA++ RH+T +EA +   LEE +Q   WG V+  H+L+         +AS FLWLL E
Sbjct:   21 SAAAETPRGGVSSGSGAKIA-----GRSRFYKAVGIEAEGD-------GYCITLDGKKVRTP-SRSLLQLPTKSLAAAVAKEWDAQ--HETIQPTTMPIMTLASTALDHWDF--DFIIEEIMKYLQTDTI--CFPVESQHQEKLAARQEKKWQPLRKWFETEFGGELDINYGTINKLEHSPVAVENVRAFVYSMDKFELMAFRLIVRECKSMVVALALLKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLNE 274          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_008606527.1 (hypothetical protein SDRG_02708 [Saprolegnia diclina VS20] >EQC40053.1 hypothetical protein SDRG_02708 [Saprolegnia diclina VS20])

HSP 1 Score: 151.8 bits (382), Expect = 4.700e-33
Identity = 97/248 (39.11%), Postives = 137/248 (55.24%), Query Frame = 0
Query:  126 GRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373
            GR RFYK VGV+ + DEA      + VTLDG  ++TP      +LPTK LA AVA+EWD Q   + I+P+ MP+  +A  +LD   +     +D  ++YL TDT+  CFP E+    KL  RQ+K W  L  W ++E+   +      + V  + P  +  V   LQ+MD F + AF  +V +LKS+  ALA+  RH+T +EA +   LEE  Q   WG V+  H+L+         +AS FLWLL E
Sbjct:   21 GRSRFYKEVGVQ-AQDEADG--GGFCVTLDGKKVRTP-ARSLLQLPTKSLAAAVAMEWDAQ--KESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTI--CFPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 258          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_012204085.1 (hypothetical protein SPRG_09500 [Saprolegnia parasitica CBS 223.65] >KDO25252.1 hypothetical protein SPRG_09500 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 151.8 bits (382), Expect = 4.700e-33
Identity = 97/248 (39.11%), Postives = 137/248 (55.24%), Query Frame = 0
Query:  126 GRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373
            GR RFYK VGV+ + DEA      + VTLDG  ++TP      +LPTK LA AVA+EWD Q   + I+P+ MP+  +A  +LD   +     +D  ++YL TDT+  CFP E+    KL  RQ+K W  L  W ++E+   +      + V  + P  +  V   LQ+MD F + AF  +V +LKS+  ALA+  RH+T +EA +   LEE  Q   WG V+  H+L+         +AS FLWLL E
Sbjct:   31 GRSRFYKEVGVQ-AQDEADG--GGFCVTLDGKKVRTP-ARSLLQLPTKSLAAAVAMEWDAQ--KESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTI--CFPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 268          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_009842462.1 (hypothetical protein H257_15893 [Aphanomyces astaci] >XP_009842463.1 hypothetical protein, variant [Aphanomyces astaci] >ETV68163.1 hypothetical protein H257_15893 [Aphanomyces astaci] >ETV68164.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 148.3 bits (373), Expect = 5.200e-32
Identity = 101/278 (36.33%), Postives = 144/278 (51.80%), Query Frame = 0
Query:   96 AAEDAAAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373
            A   AAA  E        G   K+A     GR RFYK+VG+    D        Y +TLDG  ++TP +    +LPTK LA  VA+EWD Q   + I+PT MP+  +A+ ALD   F  +  I+  ++YL TDT+  CFP E +   KL  RQ+K W+PL  W + E+G  +      +    +    +  V   +  +D F L AF  +V + KS++ ALA+  RH+T +EA +   LEE +Q   WG V+  H+L+         +AS FLWLL E
Sbjct:   19 AFSKAAALVETPRGGPSSGSGAKIA-----GRSRFYKAVGIEAEGD-------GYCITLDGKKVRTP-SRSLLQLPTKALAATVAMEWDAQ--REVIQPTTMPIMTLASTALDHWDF--EFIIEELMKYLQTDTI--CFPVESQHQEKLATRQEKKWQPLRKWFETEFGGELDINYGTITKLQHDAVAVNNVRTFVDSLDHFELMAFRLIVRECKSMVVALALFKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 277          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: OQR86812.1 (hypothetical protein ACHHYP_20446 [Achlya hypogyna])

HSP 1 Score: 147.9 bits (372), Expect = 6.900e-32
Identity = 95/246 (38.62%), Postives = 132/246 (53.66%), Query Frame = 0
Query:  126 GRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371
            GR RFYK V V  + D  G     + VTLDG  ++TP      +LPTK LA AVALEWD Q   + I+P+ MP+  +A  +LD   +     ID  ++YL TDT+  CFP E+    KL  RQ+K W  L  W ++E+   +      +    + P  +  V   L++MD F L AF  +V +LKS+  ALA+  RH+T +EA +   LEE  Q   WG V+  H+L+         +AS FLWLL
Sbjct:   29 GRSRFYKEVAVAAAEDGQG-----FCVTLDGKKVRTP-ARSLLQLPTKSLASAVALEWDAQ--KETIQPSTMPMMSLAATSLD--FWELGLIIDELMKYLQTDTI--CFPVEKTHQEKLATRQEKKWGALRKWFEEEFDGELDVNHGTITALQHNPTAVANVRAYLEQMDNFELMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLL 262          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_008898753.1 (hypothetical protein PPTG_06557 [Phytophthora parasitica INRA-310] >ETI31148.1 hypothetical protein F443_21864 [Phytophthora parasitica P1569] >ETK71530.1 hypothetical protein L915_21257 [Phytophthora parasitica] >ETL24974.1 hypothetical protein L916_21124 [Phytophthora parasitica] >ETL78189.1 hypothetical protein L917_20982 [Phytophthora parasitica] >ETM31452.1 hypothetical protein L914_20999 [Phytophthora parasitica] >ETN16424.1 hypothetical protein PPTG_06557 [Phytophthora parasitica INRA-310] >ETO59863.1 hypothetical protein F444_21886 [Phytophthora parasitica P1976] >ETP00967.1 hypothetical protein F441_21746 [Phytophthora parasitica CJ01A1] >ETP29103.1 hypothetical protein F442_21724 [Phytophthora parasitica P10297] >KUF85574.1 ATP synthase mitochondrial F1 complex assembly factor 2 [Phytophthora nicotianae])

HSP 1 Score: 145.6 bits (366), Expect = 3.400e-31
Identity = 95/257 (36.96%), Postives = 138/257 (53.70%), Query Frame = 0
Query:  119 MATSSFMGRRRFYKSVGVR----PSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEI-IFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371
            +A     G  RFYK VGV+    P  +   +  + Y VTLDG  +KTP  ++P RLPT+ +A AVA EWD Q     I P  MP+  +A+ ALD +   S Q TID  + YL TDTVCY    ++ + KL+  QQK W+P+  W  D +   +      +    +  + +  V   L++++ F L A  +L  + KS+ITALAV  RH+T +EA     LEE  Q   WG V+  H+L+      + ++AS  L+LL
Sbjct:   28 IAGPKITGVLRFYKDVGVKDVEGPEKEAGEEPRKLYAVTLDGKTVKTP-RQQPVRLPTRAMAYAVAHEWDSQ--SHDIRPATMPIMTLASTALDLVYTSSSQETIDEMMHYLHTDTVCYQVTADQQE-KLVALQQKKWKPIRKWFSDLFEGEVDVSHGSIDRLAHDQQLVDNVRAHLEKLNDFELTAMRTLTKECKSLITALAVFKRHITAKEAMDICRLEEEFQINNWGLVEGGHDLDRVNCAVKLSSASFLLYLL 280          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: GAX94826.1 (Hypothetical protein PINS_002713 [Pythium insidiosum])

HSP 1 Score: 143.7 bits (361), Expect = 1.300e-30
Identity = 93/253 (36.76%), Postives = 137/253 (54.15%), Query Frame = 0
Query:  119 MATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALD-EIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371
            +A +   G  RFYK VGV+    E G     Y VTLDG  LKTP    P +LP+K +A AVA EWD Q   + I+P  MP+  +A+ ALD E   +++  I   L YL +DTVCY    ++ + KL   Q K W+PL  W ++++   +      +G   +    +  +   LQ+ D F L +  ++  + KS+ITA AV  RH+T +EA + S +EE  Q   WG V+  H+L+      + ++AS FLWLL
Sbjct:   42 IAGNKITGVVRFYKKVGVKEVEHEDG---VRYAVTLDGKTLKTP-MRTPLQLPSKSMAAAVAQEWDAQ--EERIKPALMPMMTLASTALDLEKTSTQEELISEMLHYLHSDTVCYQVTADQQE-KLAVLQHKKWDPLRKWFREQFEGELDVSHGSIGRLTHDAALVDGMRAALQQCDVFELVSLRAMTKECKSLITAWAVFKRHLTAKEAMEISRVEEEFQIGRWGLVEGGHDLDRVNTAVRLSSASFFLWLL 287          
BLAST of NO01G01910 vs. NCBI_GenBank
Match: GAY05121.1 (Hypothetical protein PINS_012933 [Pythium insidiosum])

HSP 1 Score: 143.3 bits (360), Expect = 1.700e-30
Identity = 93/253 (36.76%), Postives = 137/253 (54.15%), Query Frame = 0
Query:  119 MATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALD-EIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371
            +A +   G  RFYK VGV+    E G     Y VTLDG  LKTP    P +LP+K +A AVA EWD Q   + I+P  MP+  +A+ ALD E   +++  I   L YL +DTVCY    ++ + KL   Q K W+PL  W ++++   +      +G   +    +  +   LQ+ D F L +  ++  + KS+ITA AV  RH+T +EA + S +EE  Q   WG V+  H+L+      + ++AS FLWLL
Sbjct:   36 IAGNKITGVVRFYKKVGVKEVEHEDG---IRYAVTLDGKTLKTP-MRTPLQLPSKSMAAAVAQEWDAQ--EERIKPALMPMMTLASTALDLEKTSTQEELISEMLHYLHSDTVCYQVTADQQE-KLAVLQHKKWDPLRKWFREQFEGELDVSHGSIGRLTHDAALVDGMRAALQQCDVFELVSLRAMTKECKSLITAWAVFKRHLTAKEAMEISRVEEEFQIGRWGLVEGGHDLDRVNTAVRLSSASFFLWLL 281          
The following BLAST results are available for this feature:
BLAST of NO01G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29190.11.100e-15971.93atp synthase mitochondrial f1 complex assembly fac... [more]
CBJ25926.11.500e-3937.65similar to ATP synthase mitochondrial F1 complex a... [more]
XP_008872988.11.100e-3437.36hypothetical protein H310_08857 [Aphanomyces invad... [more]
XP_008606527.14.700e-3339.11hypothetical protein SDRG_02708 [Saprolegnia dicli... [more]
XP_012204085.14.700e-3339.11hypothetical protein SPRG_09500 [Saprolegnia paras... [more]
XP_009842462.15.200e-3236.33hypothetical protein H257_15893 [Aphanomyces astac... [more]
OQR86812.16.900e-3238.62hypothetical protein ACHHYP_20446 [Achlya hypogyna... [more]
XP_008898753.13.400e-3136.96hypothetical protein PPTG_06557 [Phytophthora para... [more]
GAX94826.11.300e-3036.76Hypothetical protein PINS_002713 [Pythium insidios... [more]
GAY05121.11.700e-3036.76Hypothetical protein PINS_012933 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008156NSK008156Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01910.1NO01G01910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576435gene_170Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g12gene1502Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01910.1NO01G01910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01910 ID=NO01G01910|Name=NO01G01910|organism=Nannochloropsis oceanica|type=gene|length=1227bp
ATGTCCGCTACCCTCAAAGCAACGTGCCGCTTCTCGGCCTTGCTGCGGCG
CGCCTTACAAGTCCAGACTCATCACCTTTCACCAGCCCCCTTCGTGCAGC
AGCAACAGAATCCTCATACCCTCCTCGTCTCCTCTGCTCCCTTCAACAAC
ATCACCAGTACTGCCTTCACAAGCACCCCGACGCGCGCTTCCTTTTCTGT
CTCCTCCTCCTCGTCGTCGACGCACAAATCAGAGGATGTCCTGCCCTTTC
CGCACGTGGGAGGGCGACCGACGGACGAGGAGATGGCAGCAGAGGACGCG
GCGGCCGAAGCGGAGCCCCAAGAGAGTCACATGAAGGACGGACTGGCTAT
CAAGATGGCCACCTCGAGCTTTATGGGTAGGAGGAGGTTTTATAAAAGTG
TCGGCGTCCGCCCCTCCCTCGATGAAGCTGGTAAGCATGTCCAGCACTAC
GAAGTCACTCTTGACGGGTATCCACTCAAAACACCCGGCACCGAAAAGCC
CTACCGCCTCCCGACCAAAGGTCTGGCCCTTGCTGTAGCCTTGGAGTGGG
ATCAGCAAGTGACGTATAAAGGGATAGAGCCTACATATATGCCTTTAACG
GGCATGGCTACCATTGCATTGGACGAGATTATTTTTAGTAGGCAATCGAC
CATAGATAGGTGCTTGCGGTACCTTGCCACGGACACAGTTTGTTACTGCT
TTCCCGAGGAGGAAGACGACCACAAGCTCCTCCGACGACAGCAGAAGGCT
TGGGAGCCATTGTTGGCCTGGTTGAAGGATGAATATGGGGTGCATATTGC
GAAACCCTCGCATATGTTGGGTGTGTGTCATAATACCCCCGAGACCTTAA
AAAAGGTAGGCTTAATGCTTCAGGAGATGGACCCCTTTACCCTGGCAGCA
TTCCTCTCTCTTGTTCTTGATCTCAAGAGTGTGATCACTGCGTTGGCTGT
GGTGTTCAGGCACGTGACGATTGAGGAGGCCTGTCAGGCTAGTGCTTTGG
AAGAGATGCACCAGAAGGCTGCATGGGGGTCAGTGGATCTTTATCACGAG
CTGGAAGAGACGGTACTATATTCGCAGGCTGCCGCGGCGTCAAGTTTTTT
ATGGTTGTTGGCCGAAGAGGAGAAGGGAAGTAAGAAGGCGAAGGCGGGGT
TGATGCCTCACCAAGAGTTGAGGGCGCGGGTCAAGGCAAGGCTGAGGAAG
GAATTTCCGGAGAGCACCCCGAAATAG
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protein sequence of NO01G01910.1

>NO01G01910.1-protein ID=NO01G01910.1-protein|Name=NO01G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp
MSATLKATCRFSALLRRALQVQTHHLSPAPFVQQQQNPHTLLVSSAPFNN
ITSTAFTSTPTRASFSVSSSSSSTHKSEDVLPFPHVGGRPTDEEMAAEDA
AAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHY
EVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLT
GMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKA
WEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAA
FLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHE
LEETVLYSQAAAASSFLWLLAEEEKGSKKAKAGLMPHQELRARVKARLRK
EFPESTPK*
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