NO01G01910, NO01G01910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G01910 vs. NCBI_GenBank
Match: EWM29190.1 (atp synthase mitochondrial f1 complex assembly factor 2 [Nannochloropsis gaditana]) HSP 1 Score: 572.4 bits (1474), Expect = 1.100e-159 Identity = 305/424 (71.93%), Postives = 340/424 (80.19%), Query Frame = 0 Query: 1 MSATLKATCRFSALLRRALQVQTHHLSPAPFVQQQQNPHTLLVSSAPFNNITS-------------TAFTSTPTRASFSVSSSSSSTHKSEDVLPFPHVGGRPTDEEMAAEDAAAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAEEEKGSKK---AKAGLMPHQELRARVKARLRKEFPESTPK 409 MS +A+ RF+ LR Q Q + P + Q+ H L S+ I S A P ++ S SS+ST +DV P PH+GGRP+DEEMAAEDAAA AE +ESHMKDGLAIKMATSSF GRRRFYK+VGVRPSLD +G+ V HYEVTLDGYPLKTPGTEK YRLPT+GLALAVALEWDQQVTYKG+EPTYMPLTG+ATIALDEI+FSR STIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQK WEPLL WL+DE+GVHI KP+HML VCHN+PETL+KV +MLQEMDPFTLAAFLSLVLDLKSVITALA+VFRHVT+EEACQASALEE HQKAAWGSVDLYHELEETVLY+Q AAASSFLWLL EEE G K AG+MPH EL+ARVKARL+KEFP+STP+ Sbjct: 1 MSTVPRASLRFTRTLRGPGQRQIRGRNSTP---RSQSRHALTYHSSLTAGIASWGPVVRHAASLAPLACNGLPRSSACRCSFSSTST---QDVPPLPHMGGRPSDEEMAAEDAAAAAEMEESHMKDGLAIKMATSSFTGRRRFYKTVGVRPSLDPSGRQVHHYEVTLDGYPLKTPGTEKAYRLPTEGLALAVALEWDQQVTYKGVEPTYMPLTGIATIALDEIVFSRHSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKTWEPLLGWLRDEFGVHITKPAHMLDVCHNSPETLQKVRIMLQEMDPFTLAAFLSLVLDLKSVITALALVFRHVTVEEACQASALEEAHQKAAWGSVDLYHELEETVLYTQTAAASSFLWLLHEEEAGDSKELGKNAGVMPHVELKARVKARLKKEFPDSTPE 418
BLAST of NO01G01910 vs. NCBI_GenBank
Match: CBJ25926.1 (similar to ATP synthase mitochondrial F1 complex assembly factor 2 [Ectocarpus siliculosus]) HSP 1 Score: 173.3 bits (438), Expect = 1.500e-39 Identity = 96/255 (37.65%), Postives = 146/255 (57.25%), Query Frame = 0 Query: 126 GRRRFYKSVGVRPSL-----DEA------GKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWL 370 GR RFYK+V +R + DEA G +E+ LD LKTPG +P + + LA+AVA EWD Q T KGIEP MPL +A+ ALD++ R+ T+ CL+YL TDTVC+ P + D + RRQ++ W PL W ++ G+ +A + + + PE L + +L+ +D + LAA S ++ KS++ ALA++FR T+E+A A+ LEE + WG ++ H+++ AAS+ +WL Sbjct: 89 GRSRFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVLKTPG-RRPLQFDSPELAMAVAAEWDAQDTSKGIEPAVMPLMALASTALDQVASDREKTVATCLKYLPTDTVCFLSP--DPDPVIARRQRQLWSPLRDWTEEALGIPVATTTEIHRTPQHPPEALARARDLLESLDEWGLAAVQSATMECKSLVIALALLFRKTTVEKAFDAARLEEEYNVERWGMIEGGHDMDRANTTLTLTAASTLIWL 340
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_008872988.1 (hypothetical protein H310_08857 [Aphanomyces invadans] >ETV98113.1 hypothetical protein H310_08857 [Aphanomyces invadans]) HSP 1 Score: 157.1 bits (396), Expect = 1.100e-34 Identity = 102/273 (37.36%), Postives = 148/273 (54.21%), Query Frame = 0 Query: 101 AAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373 +A AE + G K+A GR RFYK+VG+ D Y +TLDG ++TP + +LPTK LA AVA EWD Q ++ I+PT MP+ +A+ ALD F I+ ++YL TDT+ CFP E + KL RQ+K W+PL W + E+G + + ++P ++ V + MD F L AF +V + KS++ ALA++ RH+T +EA + LEE +Q WG V+ H+L+ +AS FLWLL E Sbjct: 21 SAAAETPRGGVSSGSGAKIA-----GRSRFYKAVGIEAEGD-------GYCITLDGKKVRTP-SRSLLQLPTKSLAAAVAKEWDAQ--HETIQPTTMPIMTLASTALDHWDF--DFIIEEIMKYLQTDTI--CFPVESQHQEKLAARQEKKWQPLRKWFETEFGGELDINYGTINKLEHSPVAVENVRAFVYSMDKFELMAFRLIVRECKSMVVALALLKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLNE 274
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_008606527.1 (hypothetical protein SDRG_02708 [Saprolegnia diclina VS20] >EQC40053.1 hypothetical protein SDRG_02708 [Saprolegnia diclina VS20]) HSP 1 Score: 151.8 bits (382), Expect = 4.700e-33 Identity = 97/248 (39.11%), Postives = 137/248 (55.24%), Query Frame = 0 Query: 126 GRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373 GR RFYK VGV+ + DEA + VTLDG ++TP +LPTK LA AVA+EWD Q + I+P+ MP+ +A +LD + +D ++YL TDT+ CFP E+ KL RQ+K W L W ++E+ + + V + P + V LQ+MD F + AF +V +LKS+ ALA+ RH+T +EA + LEE Q WG V+ H+L+ +AS FLWLL E Sbjct: 21 GRSRFYKEVGVQ-AQDEADG--GGFCVTLDGKKVRTP-ARSLLQLPTKSLAAAVAMEWDAQ--KESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTI--CFPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 258
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_012204085.1 (hypothetical protein SPRG_09500 [Saprolegnia parasitica CBS 223.65] >KDO25252.1 hypothetical protein SPRG_09500 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 151.8 bits (382), Expect = 4.700e-33 Identity = 97/248 (39.11%), Postives = 137/248 (55.24%), Query Frame = 0 Query: 126 GRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373 GR RFYK VGV+ + DEA + VTLDG ++TP +LPTK LA AVA+EWD Q + I+P+ MP+ +A +LD + +D ++YL TDT+ CFP E+ KL RQ+K W L W ++E+ + + V + P + V LQ+MD F + AF +V +LKS+ ALA+ RH+T +EA + LEE Q WG V+ H+L+ +AS FLWLL E Sbjct: 31 GRSRFYKEVGVQ-AQDEADG--GGFCVTLDGKKVRTP-ARSLLQLPTKSLAAAVAMEWDAQ--KESIQPSTMPMMSLAATSLD--FWELDIIVDELMKYLQTDTI--CFPVEKTHQEKLATRQEKKWGTLRKWFEEEFDGELDVNHGTITVLQHNPTAVANVRAYLQQMDNFEIMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 268
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_009842462.1 (hypothetical protein H257_15893 [Aphanomyces astaci] >XP_009842463.1 hypothetical protein, variant [Aphanomyces astaci] >ETV68163.1 hypothetical protein H257_15893 [Aphanomyces astaci] >ETV68164.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 148.3 bits (373), Expect = 5.200e-32 Identity = 101/278 (36.33%), Postives = 144/278 (51.80%), Query Frame = 0 Query: 96 AAEDAAAEAEPQESHMKDGLAIKMATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLLAE 373 A AAA E G K+A GR RFYK+VG+ D Y +TLDG ++TP + +LPTK LA VA+EWD Q + I+PT MP+ +A+ ALD F + I+ ++YL TDT+ CFP E + KL RQ+K W+PL W + E+G + + + + V + +D F L AF +V + KS++ ALA+ RH+T +EA + LEE +Q WG V+ H+L+ +AS FLWLL E Sbjct: 19 AFSKAAALVETPRGGPSSGSGAKIA-----GRSRFYKAVGIEAEGD-------GYCITLDGKKVRTP-SRSLLQLPTKALAATVAMEWDAQ--REVIQPTTMPIMTLASTALDHWDF--EFIIEELMKYLQTDTI--CFPVESQHQEKLATRQEKKWQPLRKWFETEFGGELDINYGTITKLQHDAVAVNNVRTFVDSLDHFELMAFRLIVRECKSMVVALALFKRHITAKEAIELGRLEEEYQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLLKE 277
BLAST of NO01G01910 vs. NCBI_GenBank
Match: OQR86812.1 (hypothetical protein ACHHYP_20446 [Achlya hypogyna]) HSP 1 Score: 147.9 bits (372), Expect = 6.900e-32 Identity = 95/246 (38.62%), Postives = 132/246 (53.66%), Query Frame = 0 Query: 126 GRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEIIFSRQSTIDRCLRYLATDTVCYCFP-EEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371 GR RFYK V V + D G + VTLDG ++TP +LPTK LA AVALEWD Q + I+P+ MP+ +A +LD + ID ++YL TDT+ CFP E+ KL RQ+K W L W ++E+ + + + P + V L++MD F L AF +V +LKS+ ALA+ RH+T +EA + LEE Q WG V+ H+L+ +AS FLWLL Sbjct: 29 GRSRFYKEVAVAAAEDGQG-----FCVTLDGKKVRTP-ARSLLQLPTKSLASAVALEWDAQ--KETIQPSTMPMMSLAATSLD--FWELGLIIDELMKYLQTDTI--CFPVEKTHQEKLATRQEKKWGALRKWFEEEFDGELDVNHGTITALQHNPTAVANVRAYLEQMDNFELMAFRCIVRELKSMTVALALTKRHITAKEAIELGRLEEEFQIERWGLVEGGHDLDRVNCSVNVHSASFFLWLL 262
BLAST of NO01G01910 vs. NCBI_GenBank
Match: XP_008898753.1 (hypothetical protein PPTG_06557 [Phytophthora parasitica INRA-310] >ETI31148.1 hypothetical protein F443_21864 [Phytophthora parasitica P1569] >ETK71530.1 hypothetical protein L915_21257 [Phytophthora parasitica] >ETL24974.1 hypothetical protein L916_21124 [Phytophthora parasitica] >ETL78189.1 hypothetical protein L917_20982 [Phytophthora parasitica] >ETM31452.1 hypothetical protein L914_20999 [Phytophthora parasitica] >ETN16424.1 hypothetical protein PPTG_06557 [Phytophthora parasitica INRA-310] >ETO59863.1 hypothetical protein F444_21886 [Phytophthora parasitica P1976] >ETP00967.1 hypothetical protein F441_21746 [Phytophthora parasitica CJ01A1] >ETP29103.1 hypothetical protein F442_21724 [Phytophthora parasitica P10297] >KUF85574.1 ATP synthase mitochondrial F1 complex assembly factor 2 [Phytophthora nicotianae]) HSP 1 Score: 145.6 bits (366), Expect = 3.400e-31 Identity = 95/257 (36.96%), Postives = 138/257 (53.70%), Query Frame = 0 Query: 119 MATSSFMGRRRFYKSVGVR----PSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALDEI-IFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371 +A G RFYK VGV+ P + + + Y VTLDG +KTP ++P RLPT+ +A AVA EWD Q I P MP+ +A+ ALD + S Q TID + YL TDTVCY ++ + KL+ QQK W+P+ W D + + + + + + V L++++ F L A +L + KS+ITALAV RH+T +EA LEE Q WG V+ H+L+ + ++AS L+LL Sbjct: 28 IAGPKITGVLRFYKDVGVKDVEGPEKEAGEEPRKLYAVTLDGKTVKTP-RQQPVRLPTRAMAYAVAHEWDSQ--SHDIRPATMPIMTLASTALDLVYTSSSQETIDEMMHYLHTDTVCYQVTADQQE-KLVALQQKKWKPIRKWFSDLFEGEVDVSHGSIDRLAHDQQLVDNVRAHLEKLNDFELTAMRTLTKECKSLITALAVFKRHITAKEAMDICRLEEEFQINNWGLVEGGHDLDRVNCAVKLSSASFLLYLL 280
BLAST of NO01G01910 vs. NCBI_GenBank
Match: GAX94826.1 (Hypothetical protein PINS_002713 [Pythium insidiosum]) HSP 1 Score: 143.7 bits (361), Expect = 1.300e-30 Identity = 93/253 (36.76%), Postives = 137/253 (54.15%), Query Frame = 0 Query: 119 MATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALD-EIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371 +A + G RFYK VGV+ E G Y VTLDG LKTP P +LP+K +A AVA EWD Q + I+P MP+ +A+ ALD E +++ I L YL +DTVCY ++ + KL Q K W+PL W ++++ + +G + + + LQ+ D F L + ++ + KS+ITA AV RH+T +EA + S +EE Q WG V+ H+L+ + ++AS FLWLL Sbjct: 42 IAGNKITGVVRFYKKVGVKEVEHEDG---VRYAVTLDGKTLKTP-MRTPLQLPSKSMAAAVAQEWDAQ--EERIKPALMPMMTLASTALDLEKTSTQEELISEMLHYLHSDTVCYQVTADQQE-KLAVLQHKKWDPLRKWFREQFEGELDVSHGSIGRLTHDAALVDGMRAALQQCDVFELVSLRAMTKECKSLITAWAVFKRHLTAKEAMEISRVEEEFQIGRWGLVEGGHDLDRVNTAVRLSSASFFLWLL 287
BLAST of NO01G01910 vs. NCBI_GenBank
Match: GAY05121.1 (Hypothetical protein PINS_012933 [Pythium insidiosum]) HSP 1 Score: 143.3 bits (360), Expect = 1.700e-30 Identity = 93/253 (36.76%), Postives = 137/253 (54.15%), Query Frame = 0 Query: 119 MATSSFMGRRRFYKSVGVRPSLDEAGKHVQHYEVTLDGYPLKTPGTEKPYRLPTKGLALAVALEWDQQVTYKGIEPTYMPLTGMATIALD-EIIFSRQSTIDRCLRYLATDTVCYCFPEEEDDHKLLRRQQKAWEPLLAWLKDEYGVHIAKPSHMLGVCHNTPETLKKVGLMLQEMDPFTLAAFLSLVLDLKSVITALAVVFRHVTIEEACQASALEEMHQKAAWGSVDLYHELEETVLYSQAAAASSFLWLL 371 +A + G RFYK VGV+ E G Y VTLDG LKTP P +LP+K +A AVA EWD Q + I+P MP+ +A+ ALD E +++ I L YL +DTVCY ++ + KL Q K W+PL W ++++ + +G + + + LQ+ D F L + ++ + KS+ITA AV RH+T +EA + S +EE Q WG V+ H+L+ + ++AS FLWLL Sbjct: 36 IAGNKITGVVRFYKKVGVKEVEHEDG---IRYAVTLDGKTLKTP-MRTPLQLPSKSMAAAVAQEWDAQ--EERIKPALMPMMTLASTALDLEKTSTQEELISEMLHYLHSDTVCYQVTADQQE-KLAVLQHKKWDPLRKWFREQFEGELDVSHGSIGRLTHDAALVDGMRAALQQCDVFELVSLRAMTKECKSLITAWAVFKRHLTAKEAMEISRVEEEFQIGRWGLVEGGHDLDRVNTAVRLSSASFFLWLL 281 The following BLAST results are available for this feature:
BLAST of NO01G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G01910 ID=NO01G01910|Name=NO01G01910|organism=Nannochloropsis oceanica|type=gene|length=1227bpback to top protein sequence of NO01G01910.1 >NO01G01910.1-protein ID=NO01G01910.1-protein|Name=NO01G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bpback to top Synonyms
Publications
|